Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1457
         (640 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    24   1.2  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.8  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    22   5.0  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.7  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   8.7  

>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +2

Query: 329 ATGTKRKLDEYLDDSQSVVGQFN 397
           A G  R LDEYLD     + + N
Sbjct: 65  ADGNVRHLDEYLDVDAGTIAKLN 87


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -1

Query: 481 VRVVINCLLKGCTALNCAFL 422
           + V+ +C L+  +ALN AFL
Sbjct: 246 ILVIFDCCLETVSALNGAFL 265


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -2

Query: 126 LKLLQSRCQILPCRL 82
           LKL+Q++ +I  CRL
Sbjct: 248 LKLMQNKLEITACRL 262


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 381 TLCESSKYSSSFRLVPVADGWF 316
           +L E  K + +FR V V D WF
Sbjct: 34  SLREGLKGARTFRCVFVLDPWF 55


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 206 SEIISGLEQTFHYIVIIS 153
           +E+ S ++QT HY  IIS
Sbjct: 492 AEMTSHMQQTQHYTNIIS 509


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,626
Number of Sequences: 336
Number of extensions: 3074
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)