Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1455
         (546 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z19052-1|CAA79496.1|  151|Drosophila melanogaster ribosomal prot...   146   2e-35
X91854-1|CAA62965.1|  151|Drosophila melanogaster ribosomal prot...   146   2e-35
X91853-1|CAA62964.1|  151|Drosophila melanogaster ribosomal prot...   146   2e-35
AY058536-1|AAL13765.1|  151|Drosophila melanogaster LD23958p pro...   146   2e-35
AE014134-1471|ABC65883.1|  151|Drosophila melanogaster CG13389-P...   146   2e-35
AE014134-1470|AAF52649.1|  151|Drosophila melanogaster CG13389-P...   146   2e-35
BT021409-1|AAX33557.1|  580|Drosophila melanogaster LD06533p pro...    30   2.3  
AE014298-1701|AAN09303.1|  580|Drosophila melanogaster CG10347-P...    30   2.3  
AE014298-1700|AAF48103.1|  580|Drosophila melanogaster CG10347-P...    30   2.3  

>Z19052-1|CAA79496.1|  151|Drosophila melanogaster ribosomal protein
           S17 protein.
          Length = 151

 Score =  146 bits (354), Expect = 2e-35
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +2

Query: 251 EAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVL 430
           +++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKSVL
Sbjct: 76  KSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVL 135

Query: 431 PPNWKYESSTASALVA 478
           PPNWKYESSTASALVA
Sbjct: 136 PPNWKYESSTASALVA 151



 Score =  130 bits (314), Expect = 1e-30
 Identities = 61/76 (80%), Positives = 67/76 (88%)
 Frame = +3

Query: 27  MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 206
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI K G++G    QIG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKAGQEGSDSLQIGIILRDSHGV 60

Query: 207 AQVRFVTGKKILRIMK 254
           AQVRFV G KILRIMK
Sbjct: 61  AQVRFVNGNKILRIMK 76


>X91854-1|CAA62965.1|  151|Drosophila melanogaster ribosomal protein
           S13 protein.
          Length = 151

 Score =  146 bits (354), Expect = 2e-35
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +2

Query: 251 EAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVL 430
           +++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKSVL
Sbjct: 76  KSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVL 135

Query: 431 PPNWKYESSTASALVA 478
           PPNWKYESSTASALVA
Sbjct: 136 PPNWKYESSTASALVA 151



 Score =  144 bits (349), Expect = 7e-35
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = +3

Query: 27  MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 206
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 207 AQVRFVTGKKILRIMK 254
           AQVRFV G KILRIMK
Sbjct: 61  AQVRFVNGNKILRIMK 76


>X91853-1|CAA62964.1|  151|Drosophila melanogaster ribosomal protein
           S13 protein.
          Length = 151

 Score =  146 bits (354), Expect = 2e-35
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +2

Query: 251 EAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVL 430
           +++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKSVL
Sbjct: 76  KSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVL 135

Query: 431 PPNWKYESSTASALVA 478
           PPNWKYESSTASALVA
Sbjct: 136 PPNWKYESSTASALVA 151



 Score =  144 bits (349), Expect = 7e-35
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = +3

Query: 27  MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 206
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 207 AQVRFVTGKKILRIMK 254
           AQVRFV G KILRIMK
Sbjct: 61  AQVRFVNGNKILRIMK 76


>AY058536-1|AAL13765.1|  151|Drosophila melanogaster LD23958p
           protein.
          Length = 151

 Score =  146 bits (354), Expect = 2e-35
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +2

Query: 251 EAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVL 430
           +++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKSVL
Sbjct: 76  KSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVL 135

Query: 431 PPNWKYESSTASALVA 478
           PPNWKYESSTASALVA
Sbjct: 136 PPNWKYESSTASALVA 151



 Score =  144 bits (349), Expect = 7e-35
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = +3

Query: 27  MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 206
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 207 AQVRFVTGKKILRIMK 254
           AQVRFV G KILRIMK
Sbjct: 61  AQVRFVNGNKILRIMK 76


>AE014134-1471|ABC65883.1|  151|Drosophila melanogaster CG13389-PB,
           isoform B protein.
          Length = 151

 Score =  146 bits (354), Expect = 2e-35
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +2

Query: 251 EAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVL 430
           +++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKSVL
Sbjct: 76  KSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVL 135

Query: 431 PPNWKYESSTASALVA 478
           PPNWKYESSTASALVA
Sbjct: 136 PPNWKYESSTASALVA 151



 Score =  144 bits (349), Expect = 7e-35
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = +3

Query: 27  MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 206
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 207 AQVRFVTGKKILRIMK 254
           AQVRFV G KILRIMK
Sbjct: 61  AQVRFVNGNKILRIMK 76


>AE014134-1470|AAF52649.1|  151|Drosophila melanogaster CG13389-PA,
           isoform A protein.
          Length = 151

 Score =  146 bits (354), Expect = 2e-35
 Identities = 67/76 (88%), Positives = 74/76 (97%)
 Frame = +2

Query: 251 EAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVL 430
           +++GL PD+PEDLY++IKKAVA+RKHLERNRKDKD KFRLILVESRIHRLARYYKTKSVL
Sbjct: 76  KSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYKTKSVL 135

Query: 431 PPNWKYESSTASALVA 478
           PPNWKYESSTASALVA
Sbjct: 136 PPNWKYESSTASALVA 151



 Score =  144 bits (349), Expect = 7e-35
 Identities = 67/76 (88%), Positives = 72/76 (94%)
 Frame = +3

Query: 27  MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 206
           MGRMHAPGKGISQSALPYRR+VP+WLKL ADDVKEQI KLGKKGLTPS+IG++LRDSHGV
Sbjct: 1   MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGV 60

Query: 207 AQVRFVTGKKILRIMK 254
           AQVRFV G KILRIMK
Sbjct: 61  AQVRFVNGNKILRIMK 76


>BT021409-1|AAX33557.1|  580|Drosophila melanogaster LD06533p
           protein.
          Length = 580

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -2

Query: 410 NNGPVCESWTXXXXXXXXXXXXXXCVPSAFSLQQLS*SGSKDPPVSQELDPLLHDTEDLF 231
           N GP   SW+               VPS  S ++ + SGSK   V + LD ++ D E+L+
Sbjct: 290 NGGPPSYSWSQTDNNVLIRFN----VPSTASAKEFNVSGSKTTVVVKHLDEVIFD-EELY 344

Query: 230 AS 225
           AS
Sbjct: 345 AS 346


>AE014298-1701|AAN09303.1|  580|Drosophila melanogaster CG10347-PB,
           isoform B protein.
          Length = 580

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -2

Query: 410 NNGPVCESWTXXXXXXXXXXXXXXCVPSAFSLQQLS*SGSKDPPVSQELDPLLHDTEDLF 231
           N GP   SW+               VPS  S ++ + SGSK   V + LD ++ D E+L+
Sbjct: 290 NGGPPSYSWSQTDNNVLIRFN----VPSTASAKEFNVSGSKTTVVVKHLDEVIFD-EELY 344

Query: 230 AS 225
           AS
Sbjct: 345 AS 346


>AE014298-1700|AAF48103.1|  580|Drosophila melanogaster CG10347-PA,
           isoform A protein.
          Length = 580

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 21/62 (33%), Positives = 30/62 (48%)
 Frame = -2

Query: 410 NNGPVCESWTXXXXXXXXXXXXXXCVPSAFSLQQLS*SGSKDPPVSQELDPLLHDTEDLF 231
           N GP   SW+               VPS  S ++ + SGSK   V + LD ++ D E+L+
Sbjct: 290 NGGPPSYSWSQTDNNVLIRFN----VPSTASAKEFNVSGSKTTVVVKHLDEVIFD-EELY 344

Query: 230 AS 225
           AS
Sbjct: 345 AS 346


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,468,717
Number of Sequences: 53049
Number of extensions: 447326
Number of successful extensions: 1108
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1069
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)