Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1454
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1731 - 29102403-29102720,29103529-29103735,29103937-291052... 33 0.22
10_08_0172 - 15406961-15407488,15408068-15408187,15408308-154085... 31 1.2
07_03_0879 - 22256033-22256173,22256417-22256492,22256830-222572... 30 1.6
03_01_0389 + 3021849-3022136,3022237-3022753,3022835-3022988,302... 30 1.6
02_04_0657 + 24786717-24786924,24786925-24786965,24787379-247875... 30 1.6
05_03_0250 + 10955281-10955419,10955524-10955727,10955985-109560... 30 2.1
10_08_0439 - 17926021-17927133 29 2.7
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 29 3.6
03_06_0199 + 32310272-32311432 29 3.6
10_08_0936 - 21679002-21679800,21679893-21680116,21681174-216813... 29 4.8
09_06_0322 - 22329897-22330078,22330569-22331928 29 4.8
06_03_0896 + 25753377-25754325,25755081-25755691 29 4.8
09_04_0435 - 17545879-17546605,17546721-17546782,17547123-175473... 28 6.3
02_05_0398 - 28644632-28644889,28644997-28645032,28645101-286453... 28 6.3
01_07_0384 + 43209423-43210241 28 6.3
12_01_0421 - 3321590-3323692 28 8.3
12_01_0014 + 105422-105520,105598-105725,105939-106101,106198-10... 28 8.3
11_06_0490 - 24293218-24293373,24293454-24293521,24293845-242939... 28 8.3
11_01_0014 + 108647-108816,109704-109803,109891-110018,110232-11... 28 8.3
08_02_0204 - 14253258-14253383,14253685-14253878,14254029-142547... 28 8.3
06_03_0893 - 25721576-25722205,25722366-25722443,25722628-25723560 28 8.3
06_03_0347 + 19783824-19784348 28 8.3
02_05_0868 + 32342967-32343915,32344389-32344447 28 8.3
02_02_0263 - 8400488-8400913,8401011-8401481,8401581-8401843,840... 28 8.3
01_07_0081 - 40959279-40959375,40959463-40959589,40960138-409603... 28 8.3
>07_03_1731 -
29102403-29102720,29103529-29103735,29103937-29105210,
29105298-29105734,29106370-29106764,29106921-29107051,
29109034-29109052
Length = 926
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = -3
Query: 385 TSEFIDRTDKIISDATELQAMQNFIMEKIYDMN-NENKKQSEVDRYSSTLC*NSKTIW*R 209
TSE ++ DK++ A E++A EK Y++N ++NK+ S D + C
Sbjct: 326 TSEDVETDDKLLQRAKEVEAKFMVSSEKKYELNMSKNKRLSANDMFQMIQCLTEDRKQLA 385
Query: 208 RTASSRLEAQL 176
SS+++A+L
Sbjct: 386 YELSSQIKARL 396
>10_08_0172 -
15406961-15407488,15408068-15408187,15408308-15408568,
15408684-15409112
Length = 445
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +1
Query: 478 VALWRRQRRGCAGHRDDALVLNALGVVE---LLAVDTFLALRDERVDRLVAVHAFV 636
VA+ + R+G GH++ +N LGVV+ L+ + + A DER +L+ V+ F+
Sbjct: 132 VAIKQLGRKGLQGHKEWVTEVNVLGVVDHPNLVKLIGYCAEDDERGMQLLLVYEFM 187
>07_03_0879 -
22256033-22256173,22256417-22256492,22256830-22257212,
22257924-22257983,22258073-22258303,22258475-22258562,
22259265-22259365,22259586-22259727,22259824-22259939
Length = 445
Score = 30.3 bits (65), Expect = 1.6
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 5/73 (6%)
Frame = -3
Query: 685 PHRRTPVSQRHAFRERRQMRVLPPSDRR--VRHAGP---EMYRLQGALPHQVHSEQGRHH 521
PHR V+ R RR++ +LPPS RR VR A E+ G SE+ HH
Sbjct: 10 PHRLLLVAGGR--RRRRRLLLLPPSPRRVCVRAAASVELEVAAAAGEYGLPFPSERAAHH 67
Query: 520 DALHSPVAVASRA 482
L + A RA
Sbjct: 68 RELAAAAAAVERA 80
>03_01_0389 +
3021849-3022136,3022237-3022753,3022835-3022988,
3023076-3023166,3024556-3024627,3026366-3026689
Length = 481
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -3
Query: 544 HSEQGRHHDALHSPVAVASRARPKNRKRIMPTTNHNPP 431
H ++G H + +P+AV + A P + P T PP
Sbjct: 223 HQQRGHHPSYIRAPLAVVTAAPPPPPPFVNPATPQTPP 260
>02_04_0657 +
24786717-24786924,24786925-24786965,24787379-24787521,
24787597-24787774,24788054-24788123,24788197-24788345,
24788491-24788586,24789213-24789283,24789879-24789940,
24790175-24790238,24790326-24790410,24790515-24790641,
24790714-24790775,24790863-24790923,24790987-24791147,
24791355-24791648
Length = 623
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +1
Query: 91 MVMDSVDPSLAQTVSITWRKFPIKSLYLRAEPRVSTMLYVATR 219
MV+D + PSL + RKF +K++ + A+ ++ + Y+ TR
Sbjct: 231 MVIDLLGPSLEDLFNYCNRKFSLKTVLMLADQMINRVEYMHTR 273
>05_03_0250 +
10955281-10955419,10955524-10955727,10955985-10956065,
10956147-10956287,10956378-10956410,10956809-10956909,
10957282-10957912,10959378-10959514
Length = 488
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 63 HEPSECVDPHGDGQRGPFPGADR 131
H P+ P GD R PFPG R
Sbjct: 177 HNPTSAAQPGGDDHRQPFPGRHR 199
>10_08_0439 - 17926021-17927133
Length = 370
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = -1
Query: 645 AKGDKCVYCHQAIDAFVTQGQKCIDCKELYHTKCI 541
A G +C C + D +G K + CK +YH CI
Sbjct: 231 ADGAECAVCKE--DFSPGEGAKQMPCKHIYHADCI 263
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 29.1 bits (62), Expect = 3.6
Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 10/127 (7%)
Frame = -3
Query: 673 TPVSQRHAFRERRQMRVLPPSDRRVRHAGPEMY-------RLQGALPHQVHSEQGRHHDA 515
TP + ++ R PP + HAG EM+ RL+G+ PH S G A
Sbjct: 195 TPDTAHNSLSNDRSATPEPPVGSGLNHAGSEMFQPTERKGRLKGSAPHDTLSNAGTAASA 254
Query: 514 -LHSPVAVASRARP-KNRKRIMPTTN-HNPPADQKNSVTSNFNLTGTSEFIDRTDKIISD 344
+ + V V +A ++ I T + P D N++ S L + K IS
Sbjct: 255 GMGTSVLVPVKATQFESGSAITHTKDIPRPAGDISNAIISTGTLIPQKVSQVKLVKDISQ 314
Query: 343 ATELQAM 323
T Q +
Sbjct: 315 QTNTQKL 321
>03_06_0199 + 32310272-32311432
Length = 386
Score = 29.1 bits (62), Expect = 3.6
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = -3
Query: 646 RERRQMRVLPPSDRRVRHAGPEMYRLQGALPHQVHSE-QGRHHDALHSPVAVASRAR-PK 473
R R + P D + A P +GA P VH + R HDAL A+ R R P
Sbjct: 66 RRYRLVASAPGGDLVLAEASPPA---RGARPQPVHRRREARRHDALRGAAALRGRVRCPC 122
Query: 472 NRKRIMP 452
+R+ P
Sbjct: 123 HRRFAHP 129
>10_08_0936 -
21679002-21679800,21679893-21680116,21681174-21681361,
21681505-21682597
Length = 767
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/84 (27%), Positives = 39/84 (46%)
Frame = -3
Query: 508 SPVAVASRARPKNRKRIMPTTNHNPPADQKNSVTSNFNLTGTSEFIDRTDKIISDATELQ 329
S +VAS AR RK ++ T + + D +N + SEF DR + +A L+
Sbjct: 145 SDSSVASPARSSFRKPVVGTPSSSSAWDWENFYPPS---PPDSEFFDRRKADLEEANRLR 201
Query: 328 AMQNFIMEKIYDMNNENKKQSEVD 257
++ + Y + K++ EVD
Sbjct: 202 ELEEEEKARGYLHPHHLKEEDEVD 225
>09_06_0322 - 22329897-22330078,22330569-22331928
Length = 513
Score = 28.7 bits (61), Expect = 4.8
Identities = 32/141 (22%), Positives = 55/141 (39%), Gaps = 17/141 (12%)
Frame = -3
Query: 622 LPPSDRRVRHAGP--EMYRLQGALPHQVHSEQGRHHDALHSPVAVASRARPKNRKRIMPT 449
+PPS R+ H GP + A+ H + + H AL ++S ++
Sbjct: 134 IPPSLTRITHPGPMITFTNHEVAILHYIPEDTHHHPYALRPHNPLSSSSKQHYIVTAFSV 193
Query: 448 TNHNPPADQK---------NSVTSNFNLTGT----SEFIDRTDKIISDATELQAMQNFI- 311
+ PP + K T++FNL T S F RT +I+ + + F+
Sbjct: 194 NRYRPPGEYKLHLYHSHTQQWTTTHFNLAATMPDLSPFHHRTTNVINLTHQSPGLMAFVD 253
Query: 310 -MEKIYDMNNENKKQSEVDRY 251
+ + +N +K Q RY
Sbjct: 254 LWQGLLLINVLDKVQPAAPRY 274
>06_03_0896 + 25753377-25754325,25755081-25755691
Length = 519
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Frame = -3
Query: 658 RHAFRERRQMRVLPPSDRRVRHAGPEMYRLQGALPHQVHSEQGRHHDAL------HSPVA 497
R + R R LPPS + G ++ L GALPH+ + R H L PV
Sbjct: 25 RSSRRRRGACGRLPPSPWALPVIG-HLHHLAGALPHRAMRDIARRHGPLVLLRLGELPVV 83
Query: 496 VASRA 482
VAS A
Sbjct: 84 VASSA 88
>09_04_0435 -
17545879-17546605,17546721-17546782,17547123-17547335,
17547506-17547590,17547904-17548061,17548174-17548294,
17548765-17548927,17548973-17549097,17550800-17550888,
17550970-17551636,17552671-17552717,17553506-17553862
Length = 937
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -3
Query: 544 HSEQGRHHDALHSPVAVASRARPKNRKRIMPTTNHNP 434
+S QG+HHD+ S +S + ++R + +H P
Sbjct: 879 YSNQGKHHDSSRSSNISSSNRKLTEQRRTIGEVDHGP 915
>02_05_0398 -
28644632-28644889,28644997-28645032,28645101-28645364,
28645439-28645522,28645718-28645798,28645888-28645965,
28646571-28646672,28646754-28646849,28646955-28647161,
28647246-28647493,28647577-28647773,28647997-28648112
Length = 588
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/60 (23%), Positives = 27/60 (45%)
Frame = -3
Query: 424 QKNSVTSNFNLTGTSEFIDRTDKIISDATELQAMQNFIMEKIYDMNNENKKQSEVDRYSS 245
++N T + L GT R ++ D TEL+ + ++Y + + + +D Y S
Sbjct: 260 ERNKATRSLQLNGTHTTGSRGFAVVLDQTELKENRKVGRAELYVITHTKRNGEPLDEYCS 319
>01_07_0384 + 43209423-43210241
Length = 272
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -1
Query: 627 VYCHQAIDAFV---TQGQKCIDC-KELYHTKCIQNKGVITMPCTA 505
VYC + + A + T+G+KCIDC Y + I G P A
Sbjct: 127 VYCRRCVGAGMGDMTEGRKCIDCLGRRYSHRYIHRAGTNLTPSAA 171
>12_01_0421 - 3321590-3323692
Length = 700
Score = 27.9 bits (59), Expect = 8.3
Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -1
Query: 228 QRQSGSDVQHRRDSRLSS*VQRFDRELPPRDG--DGLRQGRVHAVHHHGGQRIQRVH 64
+R S S H + SS Q R+ PRD L G HHH G+R+ H
Sbjct: 5 RRDSDSRSSHHAPHKSSSFSQPSARDDKPRDAIDRNLSLGSAGHHHHHDGRRLDLHH 61
>12_01_0014 +
105422-105520,105598-105725,105939-106101,106198-106310,
106787-106825,107026-107109,107193-107241,107331-107422,
107680-107809,107906-107982,108058-109676,110024-110221,
110287-110825
Length = 1109
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 587 PCVTNASIAWWQYTHLSPFAKRVPLRNRCPAMR 685
PC I W + H+ A++ RCPA R
Sbjct: 27 PCKCGYEICVWCWHHIIDMAEKEDTEGRCPACR 59
>11_06_0490 -
24293218-24293373,24293454-24293521,24293845-24293986,
24294079-24294699,24294791-24294871,24295002-24295072,
24296106-24296176,24296568-24296675,24296786-24297024,
24297493-24297657
Length = 573
Score = 27.9 bits (59), Expect = 8.3
Identities = 28/121 (23%), Positives = 40/121 (33%), Gaps = 3/121 (2%)
Frame = -3
Query: 700 RERTLPHRRTPVSQRHAFRERRQMRVLPPS---DRRVRHAGPEMYRLQGALPHQVHSEQG 530
+ T PH R RER + + DRR R G + H+ SE+
Sbjct: 55 QHETQPHDGRSSKSRERERERDKDKERDRDRDRDRRDRDRGDKDRDRDRHREHRDRSERR 114
Query: 529 RHHDALHSPVAVASRARPKNRKRIMPTTNHNPPADQKNSVTSNFNLTGTSEFIDRTDKII 350
HHD S R R+R H + S + + S R+ K +
Sbjct: 115 EHHDRERSDDRDRRRGHDSERRRDRDRDGHRRHRSRSRSPSKGRDRRSRSRSRSRSSKRV 174
Query: 349 S 347
S
Sbjct: 175 S 175
>11_01_0014 +
108647-108816,109704-109803,109891-110018,110232-110394,
110491-110603,111080-111118,111319-111402,111486-111534,
111624-111715,111999-112128,112225-112301,112377-113995,
114348-114545,114635-115173
Length = 1166
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/33 (33%), Positives = 15/33 (45%)
Frame = +2
Query: 587 PCVTNASIAWWQYTHLSPFAKRVPLRNRCPAMR 685
PC I W + H+ A++ RCPA R
Sbjct: 84 PCKCGYEICVWCWHHIIDMAEKEDTEGRCPACR 116
>08_02_0204 - 14253258-14253383,14253685-14253878,14254029-14254743,
14254811-14254837,14258779-14258838,14263174-14264844,
14267402-14267518,14267593-14267763,14270248-14270346,
14271684-14271770,14272392-14272475,14272929-14273068,
14274414-14274494,14275492-14275680,14275986-14276022
Length = 1265
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 559 LPHQVHSEQGRHHDALHSPVAVASRARPKNRKRIMPTTNHNPP 431
+P Q+ +E H A H P+ + +R + MPT +PP
Sbjct: 1105 MPMQLPTETVNHFHAPHYPMQMPIENMALSRTQAMPTQMQSPP 1147
>06_03_0893 - 25721576-25722205,25722366-25722443,25722628-25723560
Length = 546
Score = 27.9 bits (59), Expect = 8.3
Identities = 22/61 (36%), Positives = 27/61 (44%), Gaps = 6/61 (9%)
Frame = -3
Query: 646 RERRQMRVLPPSDRRVRHAGPEMYRLQGALPHQVHSEQGRHHDAL------HSPVAVASR 485
R R + LPPS + G ++ L GALPH + R H L PV VAS
Sbjct: 31 RRRGEGGRLPPSPWGLPVIG-HLHHLAGALPHHAMRDLARRHGPLMLLRLGELPVVVASS 89
Query: 484 A 482
A
Sbjct: 90 A 90
>06_03_0347 + 19783824-19784348
Length = 174
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 2/71 (2%)
Frame = -1
Query: 684 RIAGHRFRKGTRFAKGDKCVYCHQAIDAFVTQGQKCIDCKELYHTKCIQN--KGVITMPC 511
+I + R G +C C A+ ++ CK LYH +CI T P
Sbjct: 84 KIPEFAYAGSARHGGGGECSVCLGAVQGGEAV-RRLPACKHLYHVECIDMWLASHATCPI 142
Query: 510 TAPSLSPPERD 478
+ PP D
Sbjct: 143 CRTEVEPPPED 153
>02_05_0868 + 32342967-32343915,32344389-32344447
Length = 335
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = -1
Query: 657 GTRFAKGDKCVYCHQAIDAFVTQGQKCIDCKELYHTKCI 541
G + G +C C + D + + + + CK +YH+ CI
Sbjct: 190 GAHLSDGSQCPVCKE--DFELGEAARQMPCKHVYHSDCI 226
>02_02_0263 -
8400488-8400913,8401011-8401481,8401581-8401843,
8401964-8402225
Length = 473
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +1
Query: 73 LNALTPMVMDSVDPSLAQTVSITWRKFPIKSLYLRAEPRVS 195
LN P DS DP + S+ +KFPI ++ + RV+
Sbjct: 289 LNIENPSRADSYDPRAGRITSLDSQKFPILNIIQMSATRVN 329
>01_07_0081 -
40959279-40959375,40959463-40959589,40960138-40960339,
40962414-40963361
Length = 457
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = -3
Query: 622 LPPSDRRVRHAGPEMYRLQGALPHQVHSEQGRHHDALH 509
LP D V H P + ++G LP HSE LH
Sbjct: 365 LPAPDPDVPHISPSLSFIKGVLPKYFHSEWSVAQFRLH 402
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,030,029
Number of Sequences: 37544
Number of extensions: 399439
Number of successful extensions: 1684
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1611
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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