Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1454
         (705 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           26   1.0  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          26   1.0  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.3  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   4.1  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   9.4  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 553 HQVHSEQGRHHDALHS 506
           HQ H  QG+HH   HS
Sbjct: 650 HQAHQHQGQHHAQHHS 665


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
 Frame = -3

Query: 676 RTPVSQRHAFRERRQMRVLPPSDRRVRHAGPEMYRLQGALPHQVHSEQGRHHDALHSPVA 497
           RTP+  R   R R   R +PP+      A PE  R + A+  +    + R     + P  
Sbjct: 459 RTPLPARGHVRARLTRRTIPPTRVAAAAAAPEGRRRRRAIA-RARRRRCRPRARRNPPAT 517

Query: 496 VAS-RARPKNRK 464
               R RP  RK
Sbjct: 518 TRPVRHRPTRRK 529


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -3

Query: 505 PVAVASRARPKN-RKRIMPTTNHNPPADQKNSVTSNFNLTGTSE 377
           P  + +R  PK+ RKR    T H PPA    S++S    T T +
Sbjct: 406 PSTLPTRPSPKSSRKR---RTGHRPPAGMNASMSSGKRSTATHQ 446


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 69  PSECVDPHGDGQR 107
           P ECVDP+G  QR
Sbjct: 37  PLECVDPYGRPQR 49


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -1

Query: 684 RIAGHRFRKGTRFAKGDKCVYCHQAIDAF 598
           RI  H    GT +AK  +CV  H+ I +F
Sbjct: 250 RIDHHSKVYGTMYAKVTECVLFHKDILSF 278


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,456
Number of Sequences: 2352
Number of extensions: 14864
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)