Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1453
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   0.66 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    25   0.66 
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.6  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.5  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   8.1  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 270 IVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 365
           +VT+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 650 TTAEREIVRDIKGEACATFALDFEQE 727
           T  E++ VR +  EAC +FA  F+QE
Sbjct: 215 TQDEQDSVRLLAVEACVSFASLFQQE 240


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 580 QTQDGVGECVSLVDGHGVGDTVAGSSTIPVVRPDAYS 470
           Q+ D +G C S+ D H   +  A S    +  P A S
Sbjct: 652 QSDDNLGSCGSMGDAHTPPEDDAESLNQSISSPGALS 688


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -2

Query: 580 QTQDGVGECVSLVDGHGVGDTVAGSSTIPVVRPDAYS 470
           Q+ D +G C S+ D H   +  A S    +  P A S
Sbjct: 544 QSDDNLGSCGSMGDAHTPPEDDAESLNQSISSPGALS 580


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 386 GQQREDDPDHVRNIQHARHVRRHPSRA 466
           GQ    DP+ V   +   H+  HP +A
Sbjct: 903 GQYTTKDPNEVTCDEEEGHISYHPDKA 929


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 308 MPNLLHVIPVSDDSVFDGYLRVRIPLLL 225
           +P++  +IP  DD+  D      I +LL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 308 MPNLLHVIPVSDDSVFDGYLRVRIPLLL 225
           +P++  +IP  DD+  D      I +LL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 308 MPNLLHVIPVSDDSVFDGYLRVRIPLLL 225
           +P++  +IP  DD+  D      I +LL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -1

Query: 308 MPNLLHVIPVSDDSVFDGYLRVRIPLLL 225
           +P++  +IP  DD+  D      I +LL
Sbjct: 355 LPDISEIIPTGDDTTMDSNDMTAIYVLL 382


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -3

Query: 354 RGVPRGRHAAHCRRYDAKSSP 292
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,850
Number of Sequences: 336
Number of extensions: 4700
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)