Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1453
(758 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 175 6e-45
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 103 3e-23
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 102 6e-23
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 97 3e-21
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 72 8e-14
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 66 5e-12
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 61 1e-10
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 49 6e-07
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 42 1e-04
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 34 0.025
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.10
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.41
SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase Gut2|Schi... 29 0.72
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 3.8
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 27 3.8
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 27 3.8
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 5.1
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 26 5.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 5.1
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 6.7
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 6.7
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 25 8.9
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 175 bits (426), Expect = 6e-45
Identities = 79/85 (92%), Positives = 81/85 (95%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQI+FETFN
Sbjct: 70 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQIIFETFNA 129
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PA YVAIQAVLSLYASGRTTGIVLD
Sbjct: 130 PAFYVAIQAVLSLYASGRTTGIVLD 154
Score = 143 bits (347), Expect = 2e-35
Identities = 64/69 (92%), Positives = 68/69 (98%)
Frame = +1
Query: 52 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 231
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 232 RGILTLKYP 258
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
Score = 133 bits (321), Expect = 3e-32
Identities = 64/82 (78%), Positives = 71/82 (86%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKIL ERGY+F+TTAEREIVRDIK
Sbjct: 155 SGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKE 214
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQE+ T +S
Sbjct: 215 KLCYV-ALDFEQELQTAAQSSS 235
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 103 bits (247), Expect = 3e-23
Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 QIPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 425
Q PIE GI+ NW DME+IW + + ++ L PEEHP+LLTE PL N+EK+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 426 FNTPAMYVAIQAVLSLYASGRTTGIVLD 509
N PA+ ++Q VL+LYAS RTTGIVL+
Sbjct: 132 LNVPALSFSLQPVLALYASARTTGIVLE 159
Score = 79.0 bits (186), Expect = 7e-16
Identities = 35/73 (47%), Positives = 53/73 (72%)
Frame = +2
Query: 512 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKGE 691
GDG++H+VPIY+G+++P AI + ++ GRD+TDYL L + G+ ++AE+EIVR+IK E
Sbjct: 161 GDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIK-E 219
Query: 692 ACATFALDFEQEM 730
C A DF E+
Sbjct: 220 KCCYVASDFRSEI 232
Score = 78.6 bits (185), Expect = 9e-16
Identities = 34/63 (53%), Positives = 46/63 (73%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 249
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 250 KYP 258
+ P
Sbjct: 72 QRP 74
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 102 bits (244), Expect = 6e-23
Identities = 42/85 (49%), Positives = 65/85 (76%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
P+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM + MFE +
Sbjct: 70 PMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCETMFERYGF 129
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
+YVAIQAVLSLYA G ++G+V+D
Sbjct: 130 GGVYVAIQAVLSLYAQGLSSGVVVD 154
Score = 77.8 bits (183), Expect = 2e-15
Identities = 34/76 (44%), Positives = 53/76 (69%), Gaps = 1/76 (1%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+H VP+YE L H + RLD+AGRD T YL+ +L +GY+F TA+ E VR++K
Sbjct: 155 SGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYAFNRTADFETVREMKE 214
Query: 689 EAC-ATFALDFEQEMA 733
+ C ++ L+ + +++
Sbjct: 215 KLCYVSYDLELDHKLS 230
Score = 65.7 bits (153), Expect = 7e-12
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +1
Query: 58 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 231
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 232 RGILTLKYP 258
R +L +KYP
Sbjct: 62 RSLLQVKYP 70
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 96.7 bits (230), Expect = 3e-21
Identities = 41/76 (53%), Positives = 52/76 (68%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PI HG + NWD ME+ W + + LR PE+H LLTE PLNP NRE +IMFE+FN
Sbjct: 93 PIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNC 152
Query: 435 PAMYVAIQAVLSLYAS 482
+Y+A+QAVL+L AS
Sbjct: 153 AGLYIAVQAVLALAAS 168
Score = 50.4 bits (115), Expect = 3e-07
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGY--SFTTTAEREIVRDI 682
SGDGV+H +P+ EGY + +I + LAGRD+T ++ +L +R S TAER I
Sbjct: 186 SGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAER-----I 240
Query: 683 KGEAC 697
K E C
Sbjct: 241 KEECC 245
Score = 42.7 bits (96), Expect = 5e-05
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 2/52 (3%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKDSYVGDE 219
+++DNG+G K G+AG+DAP VFP+++ R G G + K SY+ +
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIA-TRSAGASSGPAVSSKPSYMASK 58
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 72.1 bits (169), Expect = 8e-14
Identities = 33/84 (39%), Positives = 48/84 (57%)
Frame = +3
Query: 258 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 437
I +G V NWD +W + +L+ P EHP+L+TE NP NR K + MFE+ P
Sbjct: 69 IRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLETMFESLRCP 128
Query: 438 AMYVAIQAVLSLYASGRTTGIVLD 509
A Y+A Q + +ASG+ T ++D
Sbjct: 129 ATYLAKQETCAAFASGKGTACLVD 152
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/34 (47%), Positives = 24/34 (70%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 156
+EV+A+V+D GS + GF+G+D P+ V PS G
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG 42
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 66.1 bits (154), Expect = 5e-12
Identities = 31/87 (35%), Positives = 53/87 (60%), Gaps = 2/87 (2%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
P E +++NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE +N
Sbjct: 86 PFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFELYNA 144
Query: 435 PAMYVAIQAVLSLYASGR--TTGIVLD 509
P++ I + S Y + + ++GIVL+
Sbjct: 145 PSVAYGIDGLFSFYHNTKPSSSGIVLN 171
Score = 35.9 bits (79), Expect = 0.006
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 165
LV+DNGS +AG+ G+ P+ VF ++V R R
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYR 58
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +2
Query: 512 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 646
G+ SH +P+ G + R+ G + YL+K+ + SF
Sbjct: 173 GNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKLFQIKYPSF 217
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 61.3 bits (142), Expect = 1e-10
Identities = 24/82 (29%), Positives = 49/82 (59%)
Frame = +3
Query: 264 HGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAM 443
+GI+ +W+ W +L+V P E+ +++TE NP++ R+++ + FE + PA
Sbjct: 74 NGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAF 133
Query: 444 YVAIQAVLSLYASGRTTGIVLD 509
Y+ QAV +A+ ++T +++D
Sbjct: 134 YLTKQAVCVAFANSKSTALIVD 155
Score = 38.7 bits (86), Expect = 9e-04
Identities = 20/57 (35%), Positives = 33/57 (57%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQ 58
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 49.2 bits (112), Expect = 6e-07
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Frame = +3
Query: 240 PDPQIPIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMT 407
P+ PI+ G V +W+ ++ W H Y+ L P + +PV L +RE T
Sbjct: 108 PNEIQPIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELAT 166
Query: 408 QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 509
Q FE P +A + ++ LYA G G+V+D
Sbjct: 167 QFFFEECQVPGFTIAYEPLMGLYAIGILHGLVID 200
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 41.9 bits (94), Expect = 1e-04
Identities = 22/74 (29%), Positives = 42/74 (56%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+ E IV +IK
Sbjct: 163 SGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYNM--MEETYIVNEIKE 220
Query: 689 EACATFALDFEQEM 730
C + +F+++M
Sbjct: 221 SVCYV-SQNFKEDM 233
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 33.9 bits (74), Expect = 0.025
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +1
Query: 115 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPSNTESSL 279
G+ PRA F ++ P H G+++ M KD G+E S +G + + P N S +
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTPENEISEV 554
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.10
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +3
Query: 315 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 458
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.41
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 212 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 51
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
>SPCC1223.03c |gut2||glycerol-3-phosphate dehydrogenase
Gut2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 649
Score = 29.1 bits (62), Expect = 0.72
Identities = 20/65 (30%), Positives = 31/65 (47%)
Frame = +3
Query: 360 LTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCP 539
L+ P NP + + + I+ E V + VLS + R +V DP+TV P P
Sbjct: 361 LSSVPTNPTPSEDDIQLILKELQKYLVFPVDREDVLSAWCGIRP--LVRDPSTVPPGTDP 418
Query: 540 STRDT 554
+T +T
Sbjct: 419 TTGET 423
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 3.8
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 215 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 99
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 26.6 bits (56), Expect = 3.8
Identities = 15/48 (31%), Positives = 23/48 (47%)
Frame = +1
Query: 193 QKDSYVGDEAQSKRGILTLKYPSNTESSLTGMTWRRFGIIPSTMSCVS 336
+KD+ V E SK T YP ++ S LT + + + +SC S
Sbjct: 143 EKDNLVNSEYSSKYSSTTRIYPYHSLSQLTDLLTDGSFYVSTNISCFS 190
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -2
Query: 223 VPHLLHKSPSVPYRPSRPDGGAFPRSRET 137
+ L+ K+PS PY SRP A S T
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPT 334
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +3
Query: 357 LLTEAPLNPKANREKMTQIMFETFN 431
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +3
Query: 393 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTP 569
RE++ Q+ + P+ Y+ LS Y S + P+ PST HSP P
Sbjct: 134 RERLNQVELQLSERPSSYLGYHNNLSPYRSPNSY----------PSLLPSTHSPHSPAP 182
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.2 bits (55), Expect = 5.1
Identities = 17/50 (34%), Positives = 20/50 (40%)
Frame = +1
Query: 451 PSKPCSRCTRPVVPPVSCWIRRRCLPHRAHLRGIRTPPRHPASGLGRS*P 600
P P R P PP S R P + R + PP P + GRS P
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAP 401
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 6.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 97 TYRSHCLLPTRQLLRRTS*ISEI 29
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 6.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 252 FEGQDTSFALCLISYIRVLLSHTDHHA 172
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 25.4 bits (53), Expect = 8.9
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 539 IYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSF 646
+ EG +P++ ++++ G D+T MK+L + +
Sbjct: 308 VEEGVVVPNSRIKINYGGDDITLLFMKLLMRSHFPY 343
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,346,315
Number of Sequences: 5004
Number of extensions: 75764
Number of successful extensions: 263
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 227
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 257
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 363302114
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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