Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1453
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 9e-47
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 9e-47
SB_56| Best HMM Match : Actin (HMM E-Value=0) 184 9e-47
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 184 9e-47
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 184 9e-47
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 145 3e-35
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 131 7e-31
SB_54| Best HMM Match : Actin (HMM E-Value=0) 108 4e-24
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 94 1e-19
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 81 7e-16
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 2e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 55 7e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 43 2e-04
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 40 0.002
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77
SB_13911| Best HMM Match : PAN (HMM E-Value=0.033) 31 0.77
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.77
SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22) 31 1.0
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 31 1.3
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_35006| Best HMM Match : PT (HMM E-Value=3.4) 30 1.8
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_27518| Best HMM Match : RWD (HMM E-Value=0.015) 30 1.8
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12) 29 4.1
SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16) 29 4.1
SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07) 29 4.1
SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38) 29 5.4
SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026) 29 5.4
SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_29052| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45) 29 5.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_46180| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07) 28 7.2
SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43) 28 9.5
SB_25841| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016) 28 9.5
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032) 28 9.5
SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 184 bits (447), Expect = 9e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIV+D
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMD 155
Score = 147 bits (356), Expect = 1e-35
Identities = 68/71 (95%), Positives = 70/71 (98%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 139 bits (337), Expect = 2e-33
Identities = 68/82 (82%), Positives = 72/82 (87%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEM T +S
Sbjct: 216 KLCYV-ALDFEQEMETAASSSS 236
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 184 bits (447), Expect = 9e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIV+D
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMD 154
Score = 144 bits (349), Expect = 7e-35
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +1
Query: 52 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 231
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 232 RGILTLKYP 258
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
Score = 142 bits (343), Expect = 4e-34
Identities = 71/82 (86%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK- 213
Query: 689 EACATFALDFEQEMATRCXXAS 754
E A ALDFEQEMAT +S
Sbjct: 214 EKLAYVALDFEQEMATAAASSS 235
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 184 bits (447), Expect = 9e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 129
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIV+D
Sbjct: 130 PAMYVAIQAVLSLYASGRTTGIVMD 154
Score = 145 bits (352), Expect = 3e-35
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +1
Query: 52 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 231
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 232 RGILTLKYP 258
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
Score = 140 bits (339), Expect = 1e-33
Identities = 69/82 (84%), Positives = 72/82 (87%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 155 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 214
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEM T +S
Sbjct: 215 KLCYV-ALDFEQEMQTAASSSS 235
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 184 bits (447), Expect = 9e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIV+D
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMD 155
Score = 151 bits (367), Expect = 5e-37
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 140 bits (340), Expect = 8e-34
Identities = 69/82 (84%), Positives = 72/82 (87%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEM T +S
Sbjct: 216 KLCYV-ALDFEQEMTTAASSSS 236
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 184 bits (447), Expect = 9e-47
Identities = 83/85 (97%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIV+D
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVMD 155
Score = 147 bits (356), Expect = 1e-35
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/53 (60%), Positives = 36/53 (67%)
Frame = +2
Query: 596 DLTDYLMKILTERGYSFTTTAEREIVRDIKGEACATFALDFEQEMATRCXXAS 754
D + + I ERGYSFTTTAEREIVRDIK + C ALDFEQEM T +S
Sbjct: 158 DGVSHTVPIYEERGYSFTTTAEREIVRDIKEKLCYV-ALDFEQEMQTAASSSS 209
Score = 32.7 bits (71), Expect = 0.33
Identities = 15/18 (83%), Positives = 16/18 (88%), Gaps = 2/18 (11%)
Frame = +2
Query: 509 SGDGVSHTVPIYE--GYA 556
SGDGVSHTVPIYE GY+
Sbjct: 156 SGDGVSHTVPIYEERGYS 173
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 145 bits (352), Expect = 3e-35
Identities = 66/69 (95%), Positives = 69/69 (100%)
Frame = +1
Query: 52 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 231
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 232 RGILTLKYP 258
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
Score = 139 bits (337), Expect = 2e-33
Identities = 68/82 (82%), Positives = 72/82 (87%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 118 SGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 177
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEM T +S
Sbjct: 178 KLCYV-ALDFEQEMQTAASSSS 198
Score = 70.5 bits (165), Expect = 1e-12
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +3
Query: 390 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 509
N + M +IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+D
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRTTGIVMD 117
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTF 317
PIEHGIVTNWDDMEKI TF
Sbjct: 70 PIEHGIVTNWDDMEKIMFETF 90
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 131 bits (316), Expect = 7e-31
Identities = 63/74 (85%), Positives = 67/74 (90%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSH VPIYEGYALPHAILRLDLAGRDLTDYLMK++TERGYSFTTTAEREIVRDIK
Sbjct: 34 SGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYSFTTTAEREIVRDIKE 93
Query: 689 EACATFALDFEQEM 730
+ C ALDF QE+
Sbjct: 94 KLCYV-ALDFYQEI 106
Score = 62.1 bits (144), Expect = 5e-10
Identities = 28/33 (84%), Positives = 31/33 (93%)
Frame = +3
Query: 411 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 509
IMFE FN+PA+YVAIQAVLSLYASGRTTG+V D
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRTTGVVFD 33
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 108 bits (260), Expect = 4e-24
Identities = 49/71 (69%), Positives = 59/71 (83%)
Frame = +3
Query: 297 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 476
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 477 ASGRTTGIVLD 509
ASGRTTG V D
Sbjct: 2189 ASGRTTGTVFD 2199
Score = 105 bits (253), Expect = 3e-23
Identities = 46/73 (63%), Positives = 61/73 (83%)
Frame = +2
Query: 512 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKGE 691
GDGVSHTVP+Y+GY LPHA R+DLAGRDLT YL +++TERGYSF +TAE++I+RD+K
Sbjct: 2201 GDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYSFQSTAEQQIIRDLKET 2260
Query: 692 ACATFALDFEQEM 730
C A+D+E+E+
Sbjct: 2261 LCYC-AMDYEREL 2272
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 171
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 106 bits (254), Expect = 2e-23
Identities = 50/106 (47%), Positives = 69/106 (65%), Gaps = 2/106 (1%)
Frame = +3
Query: 228 QKRYP-DPQIPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREK 401
Q RY + P+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREK
Sbjct: 63 QLRYMLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREK 122
Query: 402 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCP 539
M ++MFE + +Y+AIQAVL+LYA G TG+V+D CP
Sbjct: 123 MIEVMFENYQFEGVYIAIQAVLTLYAQGLLTGVVIDSGDGVTHICP 168
Score = 86.2 bits (204), Expect = 3e-17
Identities = 39/76 (51%), Positives = 56/76 (73%), Gaps = 1/76 (1%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+H P+YEG+ALPH RLD+AGRD+T YL+K++ RGY+F TA+ E VR +K
Sbjct: 159 SGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNHTADFETVRMMKE 218
Query: 689 EAC-ATFALDFEQEMA 733
+ C + ++ EQ++A
Sbjct: 219 KLCYVGYNIEQEQKLA 234
Score = 57.6 bits (133), Expect = 1e-08
Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Frame = +1
Query: 64 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 237
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 238 ILTLKYP 258
+L + YP
Sbjct: 67 MLEVNYP 73
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 93.9 bits (223), Expect = 1e-19
Identities = 39/55 (70%), Positives = 50/55 (90%)
Frame = +3
Query: 345 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 509
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRTTG+VLD
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLD 180
Score = 82.2 bits (194), Expect = 4e-16
Identities = 35/62 (56%), Positives = 51/62 (82%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
+GDGVSH+VPIYEG+A+PH+I+R D+AGRD++ YL +L + G+ F +++E EIVR IK
Sbjct: 181 AGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFHSSSELEIVRTIKE 240
Query: 689 EA 694
E+
Sbjct: 241 ES 242
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 81.4 bits (192), Expect = 7e-16
Identities = 33/95 (34%), Positives = 59/95 (62%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCP 539
PA ++ +VL+ +A+GR+ G+V+D + P
Sbjct: 63 PAFFLCKNSVLTAFANGRSNGLVIDSGATQTSAVP 97
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE 631
SG + VP+++GY L AI+R LAG +T ++ E
Sbjct: 88 SGATQTSAVPVHDGYVLQQAIVRSPLAGDFITAQCRQMFEE 128
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 171
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +1
Query: 40 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 210
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 211 GDEAQSKRGILTL 249
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
Score = 49.2 bits (112), Expect = 4e-06
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTE-RGYSFTTTAEREIVRDIK 685
SG + IYEG+ L H + L++ G LT+ L + L + RG++FT+++ +IV DIK
Sbjct: 785 SGFSCTQAAVIYEGHTLNHTLQTLEIGGHHLTENLKQYLRDQRGHNFTSSSGWQIVNDIK 844
Query: 686 GEAC 697
+ C
Sbjct: 845 EKIC 848
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 54.8 bits (126), Expect = 7e-08
Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK- 685
SGDGV+H +P+ EGY + I + +AGRD+T ++ ++L ER E + IK
Sbjct: 68 SGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLREREMGIPPEQSMETAKTIKE 127
Query: 686 --GEACATFALDF---EQEMA 733
G C A +F EQE A
Sbjct: 128 RWGYICPDIAKEFAKYEQEPA 148
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/36 (47%), Positives = 21/36 (58%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 362
PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 301 PIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/68 (29%), Positives = 38/68 (55%)
Frame = +3
Query: 300 IWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYA 479
I H F + L+V P +H V++T +E++ +I+ F A+Y+ Q++L++Y+
Sbjct: 513 ILEHAFLS-LKVDPVKHKVIMTIPQNTGLQEKEELVEILLGYFRVQAVYLQEQSILAMYS 571
Query: 480 SGRTTGIV 503
+GIV
Sbjct: 572 YSAVSGIV 579
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.082
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 168 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 52
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 143 GNTARGASSPAKPALHIPEPLSTT 72
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_13911| Best HMM Match : PAN (HMM E-Value=0.033)
Length = 534
Score = 31.5 bits (68), Expect = 0.77
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +3
Query: 387 ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 503
A +E++ +I+ F A+Y+ Q++L++Y+ +GIV
Sbjct: 420 AKKEELVEILLGYFRVQAVYLQEQSILAMYSYSAVSGIV 458
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 143 GNTARGASSPAKPALHIPEPLSTT 72
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_58796| Best HMM Match : TIG (HMM E-Value=6.3e-22)
Length = 1709
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 430 TRPPCTSPSKPCSRCTRPVVPPVSCWIRRRCLPHRAHLRGIRTP 561
TR T +PCS TR V+P + W R LP R + ++ P
Sbjct: 1531 TRLLATKDFQPCSAKTRRVIPSFTVWRVRGRLPLRFWINIVKNP 1574
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 30.7 bits (66), Expect = 1.3
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +3
Query: 252 IPIEHGIVTNWDDMEKIWHHTFYNE 326
+P + G + NWD ++IW +TF E
Sbjct: 291 LPFQKGFLVNWDVEKQIWDYTFGKE 315
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +1
Query: 58 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 237
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 238 ILTLKY 255
L Y
Sbjct: 284 YSALFY 289
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 143 GNTARGASSPAKPALHIPEPLSTT 72
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_35006| Best HMM Match : PT (HMM E-Value=3.4)
Length = 325
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -1
Query: 263 FDGYLRVRIPLLLCASSPT*ESFCPIPTITP*WRGLPT 150
+DG + +++ LLL +SSP S PI TP +GL T
Sbjct: 273 YDGVIDIKLNLLLLSSSPMFLSAVPIAPHTPTLQGLHT 310
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +2
Query: 371 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 463
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_27518| Best HMM Match : RWD (HMM E-Value=0.015)
Length = 277
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +1
Query: 451 PSKPCSRCTRPVVPP 495
P++PCS CT+P +PP
Sbjct: 220 PTEPCSLCTKPALPP 234
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANRE 398
P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 134 PFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = -3
Query: 144 GKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCD 10
G+HC + I C G GA GN+ E C D
Sbjct: 724 GRHCEKDIDECSLGYCKNGATCTNTPGNYSCQCTEFTNGTNCELD 768
>SB_19798| Best HMM Match : Calx-beta (HMM E-Value=6.3e-12)
Length = 185
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/53 (35%), Positives = 25/53 (47%)
Frame = +3
Query: 405 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSP 563
T I F+ + P A A L L SG +G L ATV+P + D +SP
Sbjct: 26 TYIGFDLSDVPVPESAGTATLGLTRSGDVSGESLVTATVTPLTATAGTDYNSP 78
>SB_17678| Best HMM Match : zf-C2H2 (HMM E-Value=8.3e-16)
Length = 284
Score = 29.1 bits (62), Expect = 4.1
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 249 QIPIEHGIVTNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLN 380
++ +E G W+D+ + HTF +L + A E +P L+E PLN
Sbjct: 45 EVKLEKGKNQAWEDLRSVNAHTFDVKLFKEADESYP--LSEKPLN 87
>SB_3786| Best HMM Match : THAP (HMM E-Value=7.5e-07)
Length = 807
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +2
Query: 350 PRPAY*GSPQPQGQ---QREDDPDHVRNIQHARHVRRHPSRALAVRVRSYHR 496
PR A +P+PQ + Q +PDHVR + V SR+ V R+Y R
Sbjct: 704 PRDATTHTPEPQQEPEVQSHMEPDHVRYMLERMSVNYPTSRSSFVDPRTYPR 755
>SB_35900| Best HMM Match : EGF_CA (HMM E-Value=2.5e-38)
Length = 839
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 324 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 503
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 641 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 695
Query: 504 LDPATVSPTPCPSTRD 551
L +V P+P P+T D
Sbjct: 696 LSTTSVGPSPTPTTTD 711
>SB_29911| Best HMM Match : 7tm_1 (HMM E-Value=0.0026)
Length = 197
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = -2
Query: 520 TVAGSSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLL 389
T+ + + VV D Y + +ATY+ L VSN++ V+ +L
Sbjct: 20 TLGNAVVVVVVYKDPYKQLKKNLATYLIAGLAVSNLLLVVGEIL 63
>SB_28336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +3
Query: 375 LNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 503
+ PK ++ ++F F P M +A++ + A+G TGI+
Sbjct: 174 ITPKRATSQIIFVLFCIFGLPVMMLALKTAGDIIAAGLKTGII 216
>SB_23757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2834
Score = 28.7 bits (61), Expect = 5.4
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 423 TFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPS 572
T TP++ + QA S+ S T V V+P+ ST+ S TPS
Sbjct: 1840 THLTPSVASSTQAASSVILSAEVTTSVTSSTQVTPSVASSTQAATSVTPS 1889
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +3
Query: 363 TEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPS 542
T+ + ++ + T + T P++ + Q S+ +S + T V +P+ PS
Sbjct: 1870 TQVTPSVASSTQAATSVTPSTQGMPSVAPSTQMTPSVASSTQVTPSVASSTQAAPSVTPS 1929
Query: 543 TRDTHSPTPS 572
T T S TPS
Sbjct: 1930 TLMTPSVTPS 1939
>SB_14817| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 28.7 bits (61), Expect = 5.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -2
Query: 715 VESERSTSFSFDVTNDFPLGGGSERVAALGEDLHEVVCEVTTGQVQTQ 572
+ E S+S SF+ N PLG GS LH+V + T+ Q
Sbjct: 372 LSQEPSSSSSFNRKNISPLGNGSVSALTKDTSLHKVTTDNTSSNSDKQ 419
>SB_29052| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 484 VVPPVSCWIRRRCLPHRAHLRGIRTPPRHPAS 579
+VPP C I R P H G+ PPR P+S
Sbjct: 122 LVPP--CVIMRVTPPDETHAAGLSVPPRAPSS 151
>SB_8084| Best HMM Match : EGF_CA (HMM E-Value=2.8026e-45)
Length = 3094
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 324 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 503
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 590 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 644
Query: 504 LDPATVSPTPCPSTRD 551
L +V P+P P+T D
Sbjct: 645 LSTTSVGPSPTPTTTD 660
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/76 (28%), Positives = 34/76 (44%)
Frame = +3
Query: 324 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 503
E VAPE + E + P+ + T + E+ P V + +SL TT +
Sbjct: 2896 ESTVAPET--TVAPETTVAPEITASRETTVAPESTVWPVSTVEPKTTISLPV---TTLVQ 2950
Query: 504 LDPATVSPTPCPSTRD 551
L +V P+P P+T D
Sbjct: 2951 LSTTSVGPSPTPTTTD 2966
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 143 GNTARGASSPAKPALHIPEPLSTT 72
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 143 GNTARGASSPAKPALHIPEPLSTT 72
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_46180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 321
Score = 28.3 bits (60), Expect = 7.2
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 468 SLYASGRTTGIVLDPATVSPTPCPSTRDT 554
S+Y +G TGIV P T SP ++R T
Sbjct: 49 SIYVNGANTGIVGPPVTASPKSRCTSRQT 77
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +3
Query: 312 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 491
T E VAPE + E ++P+ T + ET TP VA + ++ +
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 492 TGIVLDPATVSPTPCPSTRDTHSP 563
+ TV+P + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
>SB_28070| Best HMM Match : RRM_1 (HMM E-Value=1.3e-07)
Length = 694
Score = 28.3 bits (60), Expect = 7.2
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 450 AIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTP 569
AIQ V A RTTGI LD + T+ H+PTP
Sbjct: 209 AIQIVYDHQAKERTTGIELDGRRIR-VDYSVTKRAHTPTP 247
>SB_38546| Best HMM Match : Trypsin (HMM E-Value=1.90577e-43)
Length = 506
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/46 (39%), Positives = 24/46 (52%)
Frame = +3
Query: 453 IQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHSPTPSCVWTWP 590
+ VLS++ G T L P +PTP P + T +PTPS T P
Sbjct: 203 VSIVLSMF-DGNMTIFGLSPD--APTPPPPVKTTAAPTPSPPQTPP 245
>SB_25841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.9 bits (59), Expect = 9.5
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Frame = -2
Query: 235 LFCSVPHLLHKSPSVPYR---PSRPDGGAFPRSRETLREEHHLLRSRPCTYRS 86
LF + P L SVP P+R + G P S LR + LLR + TY +
Sbjct: 213 LFSAQPESLGPVVSVPEANAVPARVETGGTPASSPNLRVDQILLRLKMLTYNT 265
>SB_5534| Best HMM Match : Peptidase_C48 (HMM E-Value=0.00016)
Length = 313
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +2
Query: 605 DYLMKILTERGYSFTTTAEREIVRDIKGEACATFALDFEQEMATRC 742
D +M I ++ +SF T EI + + C F +E+ +AT+C
Sbjct: 220 DKMMSITMDQ-WSFYTIKPYEIPQQVNSFDCGVFTCIYERCLATKC 264
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +1
Query: 436 PPCTSPSKPCSRCTRPVVPPVSC 504
PP P P T P +PP SC
Sbjct: 973 PPLPPPPPPVQTTTAPTLPPASC 995
>SB_43322| Best HMM Match : Peptidase_S9 (HMM E-Value=0.032)
Length = 216
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +2
Query: 428 QHARHVRRHPSRALAVRVRSYHRYRAGSGDGVSHTVPIYEG 550
QH RHV S ++ S +Y D + +P YEG
Sbjct: 25 QHERHVGHGKSEGERAQIDSLQKYVRDIFDHIDQIIPKYEG 65
>SB_26826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = -2
Query: 220 PHLLHKSPSVPYRPSRPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLLRR 50
P L +P + RPS + S + LL RP TYR+ LP+ LL +
Sbjct: 131 PLYLPSAPLLTERPSTYRAPLYLPSAPSTYRAPLLLTERPSTYRAPLYLPSTPLLTK 187
>SB_21041| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 27.9 bits (59), Expect = 9.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 519 VSPTPCPSTRDTHSPTPSCVWTWPV 593
VS TP + + H PTP C +PV
Sbjct: 10 VSSTPSQMSAERHEPTPQCRLKFPV 34
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,311,238
Number of Sequences: 59808
Number of extensions: 689102
Number of successful extensions: 2596
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 2219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2578
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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