Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1453
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 186 2e-47
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 186 2e-47
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 186 2e-47
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 186 2e-47
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 186 2e-47
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 186 2e-47
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 186 2e-47
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 186 2e-47
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 186 2e-47
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 186 2e-47
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 182 2e-46
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 153 2e-37
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 153 2e-37
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 151 4e-37
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 151 4e-37
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 134 5e-32
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 110 1e-24
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 95 5e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 89 4e-18
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 37 0.014
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 37 0.014
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 33 0.29
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 32 0.38
U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 29 4.7
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 28 8.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 8.3
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 186 bits (453), Expect = 2e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLD 155
Score = 151 bits (367), Expect = 4e-37
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 216 KLCYV-ALDFEQEMATAASSSS 236
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (453), Expect = 2e-47
Identities = 85/85 (100%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGIVLD 155
Score = 150 bits (363), Expect = 1e-36
Identities = 67/71 (94%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 216 KLCYV-ALDFEQEMATAASSSS 236
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 153 bits (370), Expect = 2e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 216 KLCYV-ALDFEQEMATAASSSS 236
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 153 bits (370), Expect = 2e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 216 KLCYV-ALDFEQEMATAASSSS 236
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 153 bits (370), Expect = 2e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 216 KLCYV-ALDFEQEMATAASSSS 236
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 186 bits (452), Expect = 2e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 153 bits (370), Expect = 2e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 216 KLCYV-ALDFEQEMATAASSSS 236
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 153 bits (370), Expect = 2e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 216 KLCYV-ALDFEQEMATAASSSS 236
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 186 bits (452), Expect = 2e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 27 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 86
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 87 PAMYVAIQAVLSLYASGRTTGVVLD 111
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 112 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 171
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 172 KLCYV-ALDFEQEMATAASSSS 192
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 178 MVGMGQKDSYVGDEAQSKRGILTLKYP 258
MVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYP 27
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 186 bits (452), Expect = 2e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 57 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 116
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 117 PAMYVAIQAVLSLYASGRTTGVVLD 141
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 142 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 201
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 202 KLCYV-ALDFEQEMATAASSSS 222
Score = 114 bits (274), Expect = 7e-26
Identities = 52/53 (98%), Positives = 53/53 (100%)
Frame = +1
Query: 100 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 258
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 57
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 186 bits (452), Expect = 2e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 71 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 130
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTG+VLD
Sbjct: 131 PAMYVAIQAVLSLYASGRTTGVVLD 155
Score = 153 bits (370), Expect = 2e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 142 bits (344), Expect = 2e-34
Identities = 70/82 (85%), Positives = 73/82 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIK
Sbjct: 156 SGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKE 215
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C ALDFEQEMAT +S
Sbjct: 216 KLCYV-ALDFEQEMATAASSSS 236
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 182 bits (443), Expect = 2e-46
Identities = 82/85 (96%), Positives = 84/85 (98%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREKMTQIMFETFNT
Sbjct: 70 PIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNT 129
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYV IQAVLSLYASGRTTGIVLD
Sbjct: 130 PAMYVNIQAVLSLYASGRTTGIVLD 154
Score = 146 bits (354), Expect = 1e-35
Identities = 67/69 (97%), Positives = 69/69 (100%)
Frame = +1
Query: 52 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 231
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 232 RGILTLKYP 258
RGILTLKYP
Sbjct: 62 RGILTLKYP 70
Score = 128 bits (310), Expect = 3e-30
Identities = 62/82 (75%), Positives = 69/82 (84%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
+GDGV+HTVPIYEGYALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDIK
Sbjct: 155 TGDGVTHTVPIYEGYALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKE 214
Query: 689 EACATFALDFEQEMATRCXXAS 754
+ C A DFE E+A +S
Sbjct: 215 KLCYV-AHDFESELAAAASSSS 235
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 153 bits (370), Expect = 2e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKI 302
PIEHGIVTNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 153 bits (370), Expect = 2e-37
Identities = 70/71 (98%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKI 302
PIEHGIVTNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 151 bits (367), Expect = 4e-37
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKI 302
PIEHGIVTNWDDMEKI
Sbjct: 71 PIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 151 bits (367), Expect = 4e-37
Identities = 69/71 (97%), Positives = 71/71 (100%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 225
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 226 SKRGILTLKYP 258
SKRGILTLKYP
Sbjct: 61 SKRGILTLKYP 71
Score = 35.1 bits (77), Expect = 0.055
Identities = 13/13 (100%), Positives = 13/13 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDM 293
PIEHGIVTNWDDM
Sbjct: 71 PIEHGIVTNWDDM 83
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 134 bits (325), Expect = 5e-32
Identities = 58/88 (65%), Positives = 73/88 (82%), Gaps = 1/88 (1%)
Frame = +3
Query: 249 QIPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 425
+ P+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE+ +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 426 FNTPAMYVAIQAVLSLYASGRTTGIVLD 509
FN PA+Y+ +QAVLSLYA+GRTTG+VLD
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLD 158
Score = 81.4 bits (192), Expect = 6e-16
Identities = 39/69 (56%), Positives = 50/69 (72%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+H VPI +G+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++K
Sbjct: 159 SGDGVTHAVPIVKGFAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKE 218
Query: 689 EACATFALD 715
AC ALD
Sbjct: 219 NAC-YLALD 226
Score = 71.3 bits (167), Expect = 7e-13
Identities = 29/63 (46%), Positives = 45/63 (71%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 249
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 250 KYP 258
+YP
Sbjct: 71 EYP 73
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 110 bits (264), Expect = 1e-24
Identities = 52/100 (52%), Positives = 68/100 (68%), Gaps = 1/100 (1%)
Frame = +3
Query: 243 DPQIPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMTQIMF 419
D P+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 420 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCP 539
E + ++YVA+QAVL+LYA G TG+V+D CP
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICP 168
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/73 (54%), Positives = 53/73 (72%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR +K
Sbjct: 159 SGDGVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKE 218
Query: 689 EACATFALDFEQE 727
+ C A D EQE
Sbjct: 219 KLC-YIAYDVEQE 230
Score = 55.6 bits (128), Expect = 4e-08
Identities = 28/65 (43%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 243
+VVDNG+G K G+AG + P +FPS+VGRP R + + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 244 TLKYP 258
+ YP
Sbjct: 69 DINYP 73
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 95.1 bits (226), Expect = 5e-20
Identities = 42/76 (55%), Positives = 52/76 (68%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE+FN
Sbjct: 84 PIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFESFNV 143
Query: 435 PAMYVAIQAVLSLYAS 482
P +Y+A+QAVL+L AS
Sbjct: 144 PGLYIAVQAVLALTAS 159
Score = 54.0 bits (124), Expect = 1e-07
Identities = 21/63 (33%), Positives = 38/63 (60%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+H +P+ +GY + I + +AGRD+T ++ +L +R ++ E+ + IK
Sbjct: 177 SGDGVTHCIPVADGYVIGSCIKHIPIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKE 236
Query: 689 EAC 697
+ C
Sbjct: 237 KFC 239
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 13/84 (15%)
Frame = +1
Query: 46 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGM 189
M ++ A V+DNG+G K G+AG+ P+ + PS V Q V G+
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGI 60
Query: 190 GQKDSYVGDEAQSKRGI-LTLKYP 258
D ++GDEA S T+KYP
Sbjct: 61 DDLDFFIGDEALSPAATNYTVKYP 84
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 88.6 bits (210), Expect = 4e-18
Identities = 39/94 (41%), Positives = 59/94 (62%)
Frame = +3
Query: 258 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 437
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 438 AMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCP 539
A Y++ VLS +A GRT G+++D + P
Sbjct: 154 AYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVP 187
Score = 36.3 bits (80), Expect = 0.024
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +2
Query: 491 HRYRAGSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 634
H SG + VP+++GYA+ HA+++ + G +T+ L ++L ++
Sbjct: 172 HGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLITEQLAQMLDQQ 219
Score = 33.5 bits (73), Expect = 0.17
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 153
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 428
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF 428
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+ F
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFDYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 32.7 bits (71), Expect = 0.29
Identities = 21/62 (33%), Positives = 31/62 (50%)
Frame = +3
Query: 324 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIV 503
EL+V P ++ VLL+ P ++ QI E + + Q L LYA TTG+V
Sbjct: 266 ELKVEPWKYKVLLSIPQNIPTVLIGELLQICLEDIKFQSAGITRQPSLILYAYDVTTGVV 325
Query: 504 LD 509
+D
Sbjct: 326 VD 327
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 32.3 bits (70), Expect = 0.38
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -1
Query: 236 PLLLCASSPT*ESFCPIPTITP*WRGLPTIEGN-TARGASSPAKPALHIPEPLSTTNAAT 60
PL++ +SS S TITP +G+PT N S+P P + STT A +
Sbjct: 464 PLVVSSSSSGSSSTVVTSTITPSTQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTTGATS 523
Query: 59 SSS 51
++S
Sbjct: 524 TAS 526
>U39848-3|AAA80690.1| 423|Caenorhabditis elegans Hypothetical
protein B0286.3 protein.
Length = 423
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Frame = -2
Query: 574 QDGVGECVSLVDG--HGVGDTVAGSSTIPVVRPDAYSESTA 458
+ GV V V G +G+G +AG+S++PV+ SEST+
Sbjct: 321 ESGVPTVVIAVAGRSNGLGPVIAGNSSLPVINCPPPSESTS 361
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = -2
Query: 520 TVAGSSTIPVVRPDAYSESTAWMATYMAGVLNVSNMIWVIFSLLALGLRGASVSRTGCSS 341
T+A SST P++ + + ST +T + S+ I S+ LG+ + S TG ++
Sbjct: 826 TIAYSSTTPIIARSSEASSTDTRST--TSTIFTSSEIRPTSSITILGVESTTASSTGSTT 883
Query: 340 GATRSS 323
+ +S
Sbjct: 884 SESTTS 889
>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical protein
F54F3.1 protein.
Length = 1584
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 219 GTEQKRYPDPQIPIEHGIVTNWDDMEKIWHHTFYNELRVAP---EEHPVLLTEAPLNPKA 389
GTE K Y + ++ GI +W + + +E+ VA + L+TE +NP++
Sbjct: 1348 GTEHKSYFNKELSSPEGIAVDWSSRNVYYADSMNDEIGVASLNGKFKKSLVTEGLVNPRS 1407
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +3
Query: 510 PATVSPTPCPSTRDTHSPTPSCVWTWPV 593
PAT P + R T PTP WT+ V
Sbjct: 230 PATFPPGSVSTVRYTPGPTPPAPWTYTV 257
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +1
Query: 100 KAGFAGDDAPRAVFPSIVGRPRHQG 174
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,262,439
Number of Sequences: 27780
Number of extensions: 468421
Number of successful extensions: 1931
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1913
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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