Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1453
(758 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 4e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 6e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 6e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 2e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 182 2e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 182 2e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 3e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 3e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 167 9e-42
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 163 2e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 161 5e-40
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 117 1e-26
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 95 5e-20
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 94 8e-20
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 77 2e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 4e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 59 3e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 56 3e-08
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 39 0.003
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 39 0.003
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.12
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 31 0.83
At1g32190.1 68414.m03959 expressed protein 31 0.83
At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family p... 30 1.9
At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family p... 30 1.9
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 2.4
At4g29780.1 68417.m04241 expressed protein 29 3.4
At5g29020.1 68418.m03592 hypothetical protein 29 4.4
At1g62420.1 68414.m07042 expressed protein contains Pfam profile... 28 5.9
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 4e-47
Identities = 84/85 (98%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 137 bits (332), Expect = 6e-33
Identities = 67/76 (88%), Positives = 70/76 (92%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+AEREIVRD+K
Sbjct: 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTSAEREIVRDVK- 215
Query: 689 EACATFALDFEQEMAT 736
E A ALD+EQEM T
Sbjct: 216 EKLAYIALDYEQEMET 231
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYP 258
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 6e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 135 bits (326), Expect = 3e-32
Identities = 66/76 (86%), Positives = 70/76 (92%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+K
Sbjct: 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMK- 215
Query: 689 EACATFALDFEQEMAT 736
E + ALDFEQE+ T
Sbjct: 216 EKLSYIALDFEQELET 231
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYP 258
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 6e-47
Identities = 84/85 (98%), Positives = 84/85 (98%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 131
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 134 bits (323), Expect = 8e-32
Identities = 65/76 (85%), Positives = 70/76 (92%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTTAEREIVRD+K
Sbjct: 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTTAEREIVRDMK- 215
Query: 689 EACATFALDFEQEMAT 736
E + ALD+EQE+ T
Sbjct: 216 EKLSYIALDYEQELET 231
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYP 258
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 2e-46
Identities = 83/85 (97%), Positives = 84/85 (98%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN
Sbjct: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNV 131
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 132 bits (319), Expect = 2e-31
Identities = 66/76 (86%), Positives = 68/76 (89%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRDIK
Sbjct: 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTTAEREIVRDIK- 215
Query: 689 EACATFALDFEQEMAT 736
E A ALD+EQE+ T
Sbjct: 216 EKLAYVALDYEQELET 231
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYP 258
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 132 bits (318), Expect = 3e-31
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIK
Sbjct: 157 SGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIK- 215
Query: 689 EACATFALDFEQEMAT 736
E + A+D+EQEM T
Sbjct: 216 EKLSFVAVDYEQEMET 231
Score = 125 bits (301), Expect = 4e-29
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 235 GILTLKYP 258
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 132 bits (318), Expect = 3e-31
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIK
Sbjct: 157 SGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIK- 215
Query: 689 EACATFALDFEQEMAT 736
E + A+D+EQEM T
Sbjct: 216 EKLSFVAVDYEQEMET 231
Score = 125 bits (301), Expect = 4e-29
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 235 GILTLKYP 258
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 182 bits (443), Expect = 2e-46
Identities = 81/85 (95%), Positives = 85/85 (100%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN+
Sbjct: 72 PIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNS 131
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 132 bits (318), Expect = 3e-31
Identities = 64/76 (84%), Positives = 69/76 (90%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTTAEREIVRDIK
Sbjct: 157 SGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIK- 215
Query: 689 EACATFALDFEQEMAT 736
E + A+D+EQEM T
Sbjct: 216 EKLSFVAVDYEQEMET 231
Score = 125 bits (301), Expect = 4e-29
Identities = 55/68 (80%), Positives = 62/68 (91%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 235 GILTLKYP 258
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (442), Expect = 3e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNA 131
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 134 bits (325), Expect = 5e-32
Identities = 66/76 (86%), Positives = 69/76 (90%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIK
Sbjct: 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKE 216
Query: 689 EACATFALDFEQEMAT 736
+ C ALD+EQE+ T
Sbjct: 217 KLC-YIALDYEQELET 231
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYP 258
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 3e-46
Identities = 82/85 (96%), Positives = 83/85 (97%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMFETFN
Sbjct: 72 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFNA 131
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYVAIQAVLSLYASGRTTGIVLD
Sbjct: 132 PAMYVAIQAVLSLYASGRTTGIVLD 156
Score = 134 bits (325), Expect = 5e-32
Identities = 66/76 (86%), Positives = 69/76 (90%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTTAEREIVRDIK
Sbjct: 157 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKE 216
Query: 689 EACATFALDFEQEMAT 736
+ C ALD+EQE+ T
Sbjct: 217 KLC-YIALDYEQELET 231
Score = 129 bits (312), Expect = 2e-30
Identities = 59/68 (86%), Positives = 63/68 (92%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 235 GILTLKYP 258
GILTLKYP
Sbjct: 65 GILTLKYP 72
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 167 bits (405), Expect = 9e-42
Identities = 72/85 (84%), Positives = 80/85 (94%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMFE+F
Sbjct: 73 PIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMFESFAF 132
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
P+MY+ IQAVLSLY+SGRTTGIVLD
Sbjct: 133 PSMYIGIQAVLSLYSSGRTTGIVLD 157
Score = 125 bits (302), Expect = 3e-29
Identities = 59/74 (79%), Positives = 67/74 (90%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+AEREIVRDIK
Sbjct: 158 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTSAEREIVRDIKE 217
Query: 689 EACATFALDFEQEM 730
+ C A+D+EQEM
Sbjct: 218 KLC-YIAVDYEQEM 230
Score = 120 bits (288), Expect = 1e-27
Identities = 52/68 (76%), Positives = 63/68 (92%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 234
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 235 GILTLKYP 258
GIL+LKYP
Sbjct: 66 GILSLKYP 73
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 163 bits (395), Expect = 2e-40
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
P+EHGIV NWDDMEKIWH+TFYNELRV PEEHPVLLTEAP NPKANREKMTQIMFE+F+
Sbjct: 61 PMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLLTEAPYNPKANREKMTQIMFESFDV 120
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
PAMYV++Q+VL LY+SGRTTG+VLD
Sbjct: 121 PAMYVSMQSVLYLYSSGRTTGVVLD 145
Score = 120 bits (288), Expect = 1e-27
Identities = 55/73 (75%), Positives = 65/73 (89%)
Frame = +2
Query: 512 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKGE 691
G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+AEREIVRDIK +
Sbjct: 147 GERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEK 206
Query: 692 ACATFALDFEQEM 730
C ALD+EQEM
Sbjct: 207 LCYV-ALDYEQEM 218
Score = 71.7 bits (168), Expect = 5e-13
Identities = 34/63 (53%), Positives = 43/63 (68%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 249
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R ILTL
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANRDILTL 58
Query: 250 KYP 258
K P
Sbjct: 59 KDP 61
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 161 bits (391), Expect = 5e-40
Identities = 70/85 (82%), Positives = 80/85 (94%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
P+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMFETF
Sbjct: 27 PMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMFETFAV 86
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLD 509
P+MY+ +QA LSL+ASGRTTG VLD
Sbjct: 87 PSMYIGMQAALSLHASGRTTGTVLD 111
Score = 105 bits (252), Expect = 3e-23
Identities = 55/74 (74%), Positives = 61/74 (82%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY T+AERE+VRDIK
Sbjct: 112 SGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGY---TSAEREVVRDIK- 167
Query: 689 EACATFALDFEQEM 730
E ALD+EQEM
Sbjct: 168 EQFGYIALDYEQEM 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +1
Query: 178 MVGMGQKDSYVGDEAQSKRGILTLKYP 258
MVGM + D +VGD+A+++ GILTL YP
Sbjct: 1 MVGMNENDLFVGDDAEARSGILTLDYP 27
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 117 bits (281), Expect = 1e-26
Identities = 49/96 (51%), Positives = 67/96 (69%)
Frame = +3
Query: 222 TEQKRYPDPQIPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 401
+E + D P+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 402 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLD 509
M + MFE +N +++ IQAVL+LYA G TG+V+D
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVID 155
Score = 77.0 bits (181), Expect = 1e-14
Identities = 33/73 (45%), Positives = 52/73 (71%)
Frame = +2
Query: 509 SGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKG 688
SGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+ TA+ E VR+IK
Sbjct: 156 SGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKE 215
Query: 689 EACATFALDFEQE 727
+ C + D+++E
Sbjct: 216 KLC-YISYDYKRE 227
Score = 55.6 bits (128), Expect = 3e-08
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRGIL 243
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELRHQL 66
Query: 244 TLKYP 258
+ YP
Sbjct: 67 DINYP 71
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 95.1 bits (226), Expect = 5e-20
Identities = 42/95 (44%), Positives = 62/95 (65%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK ++MFE +
Sbjct: 94 PIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAAELMFEKYKV 153
Query: 435 PAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCP 539
PA+++A VL+ +A+GR T +V+D S T P
Sbjct: 154 PALFMAKNPVLTSFATGRATSLVVDCGGGSTTISP 188
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 156
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 35.5 bits (78), Expect = 0.039
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 512 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 637
G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 180 GGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 94.3 bits (224), Expect = 8e-20
Identities = 44/90 (48%), Positives = 59/90 (65%), Gaps = 5/90 (5%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FETFN
Sbjct: 89 PIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFETFNV 148
Query: 435 PAMYVAIQAVLSLYASGRT-----TGIVLD 509
P +Y+A+ +VL+L A T TG+V+D
Sbjct: 149 PGLYIAVNSVLALAAGYTTSKCEMTGVVVD 178
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/64 (32%), Positives = 37/64 (57%)
Frame = +2
Query: 512 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKGE 691
GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG + ++ R +K
Sbjct: 180 GDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERGENIPPEDSFDVARKVKEM 239
Query: 692 ACAT 703
C T
Sbjct: 240 YCYT 243
Score = 35.9 bits (79), Expect = 0.029
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 67 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 153
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 76.6 bits (180), Expect = 2e-14
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 431
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 432 TPAMYVAIQAVLSLYASGRTTGIVLD 509
Y + QAVLSLYA GR +G +D
Sbjct: 117 VSGFYASEQAVLSLYAVGRISGCTVD 142
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 401
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/67 (44%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Frame = +1
Query: 55 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMV---GMGQKDSYVGDEAQ 225
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + +D+ D+ +
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 226 SKRGILT 246
KR + T
Sbjct: 65 GKRKLYT 71
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 59.3 bits (137), Expect = 3e-09
Identities = 30/91 (32%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 255 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 434
PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE F
Sbjct: 64 PIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFEDFGF 123
Query: 435 PAMYVA-IQAVLSLYASGRTTGIVLDPATVS 524
++Y+A Q+++ LY + R +L S
Sbjct: 124 SSLYIAHPQSLVHLYEASRQPDSILSKTQCS 154
Score = 46.0 bits (104), Expect = 3e-05
Identities = 27/95 (28%), Positives = 45/95 (47%)
Frame = +2
Query: 413 HVRNIQHARHVRRHPSRALAVRVRSYHRYRAGSGDGVSHTVPIYEGYALPHAILRLDLAG 592
H +++ H R P L+ ++ G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 593 RDLTDYLMKILTERGYSFTTTAEREIVRDIKGEAC 697
+ T+YL ++++ R S E +V D K + C
Sbjct: 187 KAFTNYLKELVSYR--SINVMDETFLVDDAKEKLC 219
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 162
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 55.6 bits (128), Expect = 3e-08
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +3
Query: 246 PQIPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 422
P+ P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FE
Sbjct: 82 PRSPFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFE 141
Query: 423 TFNTPAMYVAIQAVLSLYASGRTTGIVLDPATVSPTPCPSTRDTHS 560
T+ PA+ + A S Y + GI V CP THS
Sbjct: 142 TYGVPAVAFGVDAAFS-YKYNQLHGICKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +1
Query: 70 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 216
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 31.9 bits (69), Expect = 0.48
Identities = 19/73 (26%), Positives = 36/73 (49%)
Frame = +2
Query: 512 GDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKGE 691
G +H++P +G + R ++ G +TDYL ++L+ + ++ E D+K E
Sbjct: 177 GFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLKYPFHSSRFTWEKAEDLKLE 236
Query: 692 ACATFALDFEQEM 730
C A D+ E+
Sbjct: 237 HC-YIAPDYASEI 248
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +3
Query: 312 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 461
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 462 VLSLYASGRTTGIVLD 509
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +3
Query: 312 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 461
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 462 VLSLYASGRTTGIVLD 509
VL+LYA+ RT+GIV++
Sbjct: 241 VLALYAARRTSGIVVN 256
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -1
Query: 191 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 54
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 31.1 bits (67), Expect = 0.83
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 368 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSYHR 496
GSP+ +G + E+D D + NI+H + +H + A+ SY R
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSYGR 136
>At1g32190.1 68414.m03959 expressed protein
Length = 422
Score = 31.1 bits (67), Expect = 0.83
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = +1
Query: 415 CSKHSTRPPCTSPSKPCSRC-TRPVVPPVSCWIRRRC 522
C K S C P+ CS C +P P SCW +C
Sbjct: 343 CKKPSCVSSCCCPTFKCSSCFGKPKCPKCSCWKCLKC 379
>At5g37370.2 68418.m04490 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 385
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +1
Query: 526 PHRAHLRGIRTPPRHPASGLGRS*PHRLPHEDPHRARLLVHYHRRAGNRS*HQRRSLCYV 705
PHRA RG R P +G R+ + P R++ +Y R +R + R
Sbjct: 205 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDRQREREREKDRE 264
Query: 706 RSRLR 720
R R R
Sbjct: 265 RERGR 269
>At5g37370.1 68418.m04489 pre-mRNA splicing factor PRP38 family
protein (SRL1) contains Pfam profile PF03371: PRP38
family
Length = 393
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/65 (29%), Positives = 27/65 (41%)
Frame = +1
Query: 526 PHRAHLRGIRTPPRHPASGLGRS*PHRLPHEDPHRARLLVHYHRRAGNRS*HQRRSLCYV 705
PHRA RG R P +G R+ + P R++ +Y R +R + R
Sbjct: 213 PHRASTRGSSPVRRPPPTGYDRNGGDEVQQRSPRRSQSRDYYSDRDSDRQREREREKDRE 272
Query: 706 RSRLR 720
R R R
Sbjct: 273 RERGR 277
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect(2) = 2.4
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 167 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 81
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 2.4
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -1
Query: 356 DGVFLGGDTQLIVEGMMPNLLHVIPVS 276
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
>At4g29780.1 68417.m04241 expressed protein
Length = 540
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 587 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKGEACATF 706
+G LTDYL+ T + ++T A E + +I+G A A F
Sbjct: 413 SGFPLTDYLLVPYTRQNLTWTQHAFNESIGEIQGIATAAF 452
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 445 TSPSKPCSRCTRPVVPPVSCWIRRRCLPHRAHLRGIRTPPRHPASGL 585
++P+KPC T PV PP +R+ RG+ P P+ L
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPSRGLSPNPTDPSGVL 72
>At1g62420.1 68414.m07042 expressed protein contains Pfam profile
PF04720: Protein of unknown function (DUF506)
Length = 465
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +1
Query: 154 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPSNTESSLTGMTWRRFG 306
G R + + M ++VGD + SKR ++ ++ L +W RFG
Sbjct: 84 GEERMRILSATMEVAGTFVGDISSSKRHLMAFLRNKGFDAGLCKSSWERFG 134
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,616,408
Number of Sequences: 28952
Number of extensions: 456539
Number of successful extensions: 1649
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1640
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1692519896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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