Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1452
(726 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046) 34 0.13
SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_24123| Best HMM Match : RCSD (HMM E-Value=3.8) 34 0.13
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 33 0.24
SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_2821| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54) 32 0.54
SB_21119| Best HMM Match : Orexin_rec2 (HMM E-Value=3.9) 32 0.54
SB_47342| Best HMM Match : VWA (HMM E-Value=0) 31 0.72
SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83) 31 0.72
SB_29436| Best HMM Match : PAN (HMM E-Value=0.021) 31 0.72
SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.95
SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081) 31 0.95
SB_26471| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12) 30 1.7
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_22927| Best HMM Match : SerH (HMM E-Value=1.1) 30 1.7
SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24) 30 1.7
SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_4802| Best HMM Match : zf-C2H2 (HMM E-Value=9.1e-19) 30 2.2
SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_32852| Best HMM Match : bZIP_2 (HMM E-Value=0.58) 29 2.9
SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0) 29 3.8
SB_441| Best HMM Match : zf-C2H2 (HMM E-Value=5.5) 29 5.1
SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30) 29 5.1
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 29 5.1
SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.1
SB_59547| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_58772| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_49934| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_17138| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_5548| Best HMM Match : PT (HMM E-Value=3.1) 28 6.7
SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45) 28 8.9
SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.9
SB_30378| Best HMM Match : RCSD (HMM E-Value=0.78) 28 8.9
>SB_13377| Best HMM Match : Extensin_2 (HMM E-Value=0.00046)
Length = 797
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +3
Query: 342 INYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTS---QETPKIRHTPVTP 506
+++ P +PL SP R+SP +T + S R+ +P+TS TP++ H+P TP
Sbjct: 649 VHHSPRTPL-PAYTSPRVRHSP-RTPVPAYTSPRVHQSPRTSLPAYSTPRVLHSPRTP 704
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = +3
Query: 342 INYKPTSPLIERLKSPETRNSPLKTMT--NSPKSQRLTLTPKTSQETPKIRHTPVTP 506
+++ P +P + +P +SP + SP+ TP + TP++ H+P TP
Sbjct: 544 VHHSPRTP-VPAYTTPRVHHSPRTPLPAYTSPRVHHSPRTPVPAYTTPRVLHSPRTP 599
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 384 SPETRNSPLKTMT--NSPKSQRLTLTPKTSQETPKIRHTPVTP 506
SP NSP SP+ + TP + TP++ H+P TP
Sbjct: 161 SPRVHNSPRTPFLAYTSPREHQSPRTPLPAYFTPRVIHSPRTP 203
Score = 29.5 bits (63), Expect = 2.9
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Frame = +3
Query: 357 TSPLIERL-KSPETRNSPLKTM--TNSPKSQRLTLTPKTSQETPKIRHTPVTP 506
TSP + ++P SP T+ +P+ TP + +P++RH+P TP
Sbjct: 620 TSPRVHHSPRTPLPAYSPRTTLPANTTPRVHHSPRTPLPAYTSPRVRHSPRTP 672
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 402 SPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTP 506
+PL T SP+ + TP + TP++ H+P TP
Sbjct: 461 TPLPAYT-SPREHQSPCTPVPAYTTPRVLHSPRTP 494
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 333 SSPINYKPTSPLIERLKSPETRNSPLKTMT--NSPKSQRLTLTPKTSQETPKIRHTPVTP 506
S +++ P +P + +P +SP + SP+ TP + +P++ H+P TP
Sbjct: 573 SPRVHHSPRTP-VPAYTTPRVLHSPRTPVPAYTSPRVHHSPRTPLPAYTSPRVHHSPRTP 631
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 333 SSPINYKPTSPLIERLKSPETRNSPLKTMT--NSPKSQRLTLTPKTSQETPKIRHTPVTP 506
S + + P +P + SP SP ++ ++P+ TP + +P++ H+P TP
Sbjct: 662 SPRVRHSPRTP-VPAYTSPRVHQSPRTSLPAYSTPRVLHSPRTPVPAYTSPRVLHSPRTP 720
Score = 28.3 bits (60), Expect = 6.7
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +3
Query: 336 SPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTP 506
SP P L SP T PL T T SP+ TP + +P++ +P TP
Sbjct: 474 SPCTPVPAYTTPRVLHSPRT---PLPTYT-SPREHHSPRTPLPTYTSPRVHQSPRTP 526
>SB_41443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 330 LSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRL-TLTPKTSQETPKIRHTPVTP 506
L +P+ P + S ++ SPL+ + S + T TPK+S +TP TP TP
Sbjct: 16 LDAPLAKGPAPRWQRKASSGRSQTSPLRNSSRLNTSTKTPTKTPKSSNKTPLTAKTPKTP 75
Query: 507 K*D 515
D
Sbjct: 76 SED 78
>SB_24123| Best HMM Match : RCSD (HMM E-Value=3.8)
Length = 255
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +3
Query: 330 LSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRL-TLTPKTSQETPKIRHTPVTP 506
L +P+ P + S ++ SPL+ + S + T TPK+S +TP TP TP
Sbjct: 16 LDAPLAKGPAPRWQRKASSGRSQTSPLRNSSRLNTSTKTPTKTPKSSNKTPLTAKTPKTP 75
Query: 507 K*D 515
D
Sbjct: 76 SED 78
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 33.1 bits (72), Expect = 0.24
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +3
Query: 246 EDVPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETR-NSPLKTMT 422
ED P + D+ + ++ + + + P + + T+P R S +T N+ KT
Sbjct: 279 EDKPEDKTEDRPEDKPEDKLEDKPKENQQNKPEDKQQTTPKTSRKTSQKTSLNASRKTSR 338
Query: 423 NSPKSQRLTLTPKTSQETPKIRHTPVTPK 509
+ + L +PKTS +T +++ +PK
Sbjct: 339 KTSLKRSLKTSPKTSPKTMRMKSLKTSPK 367
>SB_39471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 167
Score = 32.3 bits (70), Expect = 0.41
Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
Frame = +3
Query: 276 QSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSP--ETRNSPLKTMTNSPKSQRLT 449
Q+ P ++ + I N ++PIN + +P+I++ +P E N+PL N+P Q+
Sbjct: 12 QANNPINQQASNPI-NQQANNPINQQANNPMIQQANNPLTEQANNPLTQEANNPTGQQPN 70
Query: 450 LTPKTSQETPKIRHTPVTP 506
P Q T P P
Sbjct: 71 -QPTGQQPTDPTGQQPNDP 88
>SB_2821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 32.3 bits (70), Expect = 0.41
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = -3
Query: 712 VSRIFFIIKFHESFCHHWLTVLLV 641
+SR+ I HE FCHHWL+ ++V
Sbjct: 98 LSRVVVTIGCHEWFCHHWLSRVVV 121
>SB_54883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2070
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 545 ILDRPSPLTSRSLRGTLKIKEVLEDRSWYKRS--NKENCEPMMAETFMKFDNEEDARDCS 718
+LD+P + ++ L EVLE ++ KRS + C+ + FM+ D+ +D R +
Sbjct: 1480 LLDQPQKKAFKEIKKKLASTEVLEHYAFEKRSIVAPDACQDGLGAVFMQIDDLDDRRPIA 1539
Query: 719 F 721
+
Sbjct: 1540 Y 1540
>SB_39577| Best HMM Match : DUF1213 (HMM E-Value=0.54)
Length = 240
Score = 31.9 bits (69), Expect = 0.54
Identities = 23/93 (24%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Frame = +3
Query: 246 EDVPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETR-----NSPL 410
ED P S D+ + ++ + + + P + + TSP R S +T N+
Sbjct: 27 EDKPEDKSEDRLEDKPEDKLEDKPKENQQNKPEDKQQTSPKTSRKTSKKTSQKTSLNASR 86
Query: 411 KTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPK 509
KT + + L +PKTS +T +++ +PK
Sbjct: 87 KTSRRTSLKRSLKTSPKTSPKTMRMKSLKTSPK 119
>SB_21119| Best HMM Match : Orexin_rec2 (HMM E-Value=3.9)
Length = 306
Score = 31.9 bits (69), Expect = 0.54
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +2
Query: 545 ILDRPSPLTSRSLRGTLKIKEVLEDRSWYKRS--NKENCEPMMAETFMKFDNEEDARDCS 718
+LD+P + ++ L EVLE ++ KRS + C+ + FM+ D+ +D R +
Sbjct: 83 LLDQPQKKAFKEIKKKLASTEVLEHYAFEKRSIVAPDACQDGLGAVFMQIDDLDDRRPIA 142
Query: 719 F 721
+
Sbjct: 143 Y 143
>SB_47342| Best HMM Match : VWA (HMM E-Value=0)
Length = 483
Score = 31.5 bits (68), Expect = 0.72
Identities = 25/87 (28%), Positives = 40/87 (45%)
Frame = +3
Query: 246 EDVPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTN 425
ED+ SFD+ +K+ +PI PT + R SP T P+ T+
Sbjct: 208 EDIYEVESFDKLIAEAKK-----FSKRACPAPIQPSPTDSQVTRENSPSTTRRPITTIPT 262
Query: 426 SPKSQRLTLTPKTSQETPKIRHTPVTP 506
S + RL+ TP T ++T + R + + P
Sbjct: 263 S-RPTRLS-TPSTRRKTTR-RASTIPP 286
>SB_33602| Best HMM Match : Amelogenin (HMM E-Value=0.83)
Length = 242
Score = 31.5 bits (68), Expect = 0.72
Identities = 22/72 (30%), Positives = 34/72 (47%)
Frame = +3
Query: 306 LSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKI 485
+S + + + I Y PT+P R +P SPL T SP S ++ + + T
Sbjct: 1 MSTVAHKVFWVYILYSPTAPRPHRPIAP----SPLGPTTPSPPSHHGPISLRPHRPTIPS 56
Query: 486 RHTPVTPK*DHR 521
H P+TP+ HR
Sbjct: 57 PHDPITPR-PHR 67
>SB_29436| Best HMM Match : PAN (HMM E-Value=0.021)
Length = 419
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Frame = +3
Query: 381 KSPETRNSP----LKTMTNSPKSQRLTLTPKTSQ--ETPKIRHTPVTPK 509
+SPET+++ ++ T SP++Q T TP+T ETP+ + T TP+
Sbjct: 99 ESPETQSTTETPETQSTTESPETQSTTQTPETQSTTETPETQSTTETPE 147
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Frame = +3
Query: 357 TSPLIERLKSPETRNSP-LKTMTNSPKSQRLTLTPKTSQ--ETPKIRHTPVTPK 509
T E ++ T SP ++ T +P++Q T TP+T ETP+ + T TP+
Sbjct: 103 TQSTTETPETQSTTESPETQSTTQTPETQSTTETPETQSTTETPETQSTTDTPE 156
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/45 (37%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Frame = +3
Query: 381 KSPETRNSPLKTMTNSPKSQRLTLTPKT--SQETPKIRHTPVTPK 509
K+PET+++ T SP++Q T TP+T + E+P+ + T TP+
Sbjct: 90 KAPETQST-----TESPETQSTTETPETQSTTESPETQSTTQTPE 129
Score = 28.7 bits (61), Expect = 5.1
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +3
Query: 255 PHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERL-KSPETRNSPLKTMTNSP 431
P + S +SP + Q++ S +P + ++PET+++ T +P
Sbjct: 92 PETQSTTESPETQSTTETPETQSTTESPETQSTTQTPETQSTTETPETQST-----TETP 146
Query: 432 KSQRLTLTPKTSQ--ETPKIRHTPVTPK 509
++Q T TP+T +TP+ + T TP+
Sbjct: 147 ETQSTTDTPETQSPTQTPETQSTTTTPE 174
>SB_11110| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 862
Score = 31.1 bits (67), Expect = 0.95
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +3
Query: 288 PSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRL 446
PS I+ D S SSP N + SP++ RL E+R+S L+ ++ SP RL
Sbjct: 50 PSDDCIIFDDSFSSCSSPENKQLYSPVVARLLD-ESRSSELEELSYSPVVARL 101
>SB_37609| Best HMM Match : Extensin_2 (HMM E-Value=0.081)
Length = 1617
Score = 31.1 bits (67), Expect = 0.95
Identities = 28/80 (35%), Positives = 37/80 (46%), Gaps = 3/80 (3%)
Frame = +3
Query: 279 SPGPSKRRILS---DIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLT 449
SP S R++S D N I SP+ Y+ S L S +SPL P+SQ
Sbjct: 1071 SPQSSSFRVMSTCSDDSNIIPESPLKYQQ-SRLEHSFDSLVQHHSPL------PESQLRH 1123
Query: 450 LTPKTSQETPKIRHTPVTPK 509
PKTS+ K + PV P+
Sbjct: 1124 SWPKTSETPQKPENDPVIPR 1143
>SB_26471| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 566
Score = 30.7 bits (66), Expect = 1.3
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Frame = -3
Query: 481 FGVSCEVFGVRVNLWDFGEFVMVFRGEF--LVSGDFNLSIRGEVGL*LIGELSIEFC--M 314
+G F ++ W +GE F GEF G+ + S+ GE+ L GELS F +
Sbjct: 65 YGEFSSWFYGEISSWFYGELSFWFYGEFSSWFYGELSSSLSGELSSWLYGELSSWFYGEL 124
Query: 313 SERILRFEGPGLWSKLSEW 257
S L+ +LS W
Sbjct: 125 SSWFYGELSSWLYGELSSW 143
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 481 FGVSCEVFGVRVNLWDFGEFVMVFRGEF--LVSGDFNLSIRGEVGL*LIGELS 329
+G F ++ W +GE F GEF G+ + S+ GE+ L GELS
Sbjct: 161 YGEFSSWFYGEISSWFYGELSFWFYGEFSSWFYGELSSSLSGELSSWLYGELS 213
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = -3
Query: 481 FGVSCEVFGVRVNLWDFGEFVMVFRGEF--LVSGDFNLSIRGEVGL*LIGELS 329
+G F ++ W +GE F GEF G+ + S+ GE+ GELS
Sbjct: 407 YGEFSSWFYGEISSWFYGELSFWFYGEFSSWFYGELSSSLSGELSSWFYGELS 459
>SB_48991| Best HMM Match : Rad52_Rad22 (HMM E-Value=5.2e-12)
Length = 353
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 294 KRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNS--PLKT--MTNSPKSQRLTLTPK 461
K R D N ++PIN T+ ++ S + +NS P+KT ++P + L
Sbjct: 133 KSRTSEDSSNRNCTTPINQSTTTVTVKNETSSDRKNSNQPIKTPCAESTPIALENRLVKT 192
Query: 462 TSQETPKIRHTPVTP 506
++ TP++ H+ TP
Sbjct: 193 SAVTTPQVSHS-TTP 206
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 30.3 bits (65), Expect = 1.7
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 384 SPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTP 506
+P TR++P + ++P + TP T TP + HTP TP
Sbjct: 645 TPSTRSTP--STPSTPSTPSTPSTPSTPS-TPSLTHTPSTP 682
Score = 29.1 bits (62), Expect = 3.8
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 306 LSDIQNSILSSPINYKPTSPLIERLKS-PETRNSPLKTMTNS-PKSQRLTLTPKTSQETP 479
L+ + LS+P P++P S P T ++P T S P + LT TP T TP
Sbjct: 629 LAHLCTCTLSTPST--PSTPSTRSTPSTPSTPSTPSTPSTPSTPSTPSLTHTPSTPS-TP 685
Query: 480 KIRHTPVTP 506
TP TP
Sbjct: 686 STPSTPSTP 694
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 354 PTSPLIERLKS-PETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTP 506
P++P+ R S P T ++P +P + TP T TP + HTP TP
Sbjct: 413 PSTPITPRTPSTPCTHSTP-----GTPSTPSTPSTPSTPS-TPSLTHTPSTP 458
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Frame = +3
Query: 375 RLKSPETRNSPLKTMTNS-PKSQRLTLTPKT--SQETPKIRHTPVTP 506
+L +P T +P T S P + R TP T + TP TP+TP
Sbjct: 8 KLSTPSTPCTPSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITP 54
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 354 PTSPLIERLKS-PETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTP 506
P++P + S P T ++P T S S T + ++ TPK TP TP
Sbjct: 282 PSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTP 333
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +3
Query: 306 LSDIQNSILSSPINYKPTSPLIERLKS-PETRNSPLKTMTNS-PKSQRLTLTPKTSQETP 479
L DI S S+P P++P S P T ++P T S P + +TP+T TP
Sbjct: 369 LVDIITSTPSTPCT--PSTPSTPSTPSTPRTPSTPSTPCTPSTPSTPSTPITPRTPS-TP 425
Query: 480 KIRHTPVTP 506
TP TP
Sbjct: 426 CTHSTPGTP 434
Score = 28.3 bits (60), Expect = 6.7
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = +3
Query: 333 SSPINYK-PTSPLIERLKSPETRNSPLKTMTNS-PKSQRLTLTPKT--SQETPKIRHTPV 500
S+PI + P++P +P T ++P T S P + LT TP T + TP TP
Sbjct: 414 STPITPRTPSTPCTH--STPGTPSTPSTPSTPSTPSTPSLTHTPSTPSTPSTPSTPSTPS 471
Query: 501 TP 506
TP
Sbjct: 472 TP 473
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 354 PTSPLIERLKS-PETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTP 506
P++P + S P T ++P T S S T + ++ TPK TP TP
Sbjct: 832 PSTPSMPSTPSTPSTPSTPSTPSTPSAPSTPSTPSTPSTPSTPKTPSTPCTP 883
>SB_36971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1870
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 282 PGPSKRRILSDIQ-NSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTP 458
P S R ++D+ N++ S P+ YK P+ KSP P+ ++ +PKS TP
Sbjct: 369 PIVSHRMRITDVAFNAVSSKPV-YKAFRPV----KSPGREQKPVISLMPTPKSVTTGTTP 423
Query: 459 KTSQE 473
T+ E
Sbjct: 424 ATTSE 428
>SB_22927| Best HMM Match : SerH (HMM E-Value=1.1)
Length = 678
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/68 (26%), Positives = 35/68 (51%)
Frame = +3
Query: 294 KRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQE 473
K ++ + +S+ +S T +I S E + SP+ ++T+S + T PK+S
Sbjct: 526 KAAYITSVTSSVQASHAK-SITQSIISVAASAELQGSPVTSVTHSGDLKYTTSPPKSSIV 584
Query: 474 TPKIRHTP 497
TP + ++P
Sbjct: 585 TPDLSNSP 592
>SB_3503| Best HMM Match : Rad52_Rad22 (HMM E-Value=1e-24)
Length = 398
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/75 (28%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = +3
Query: 294 KRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNS--PLKT--MTNSPKSQRLTLTPK 461
K R D N ++PIN T+ ++ S + +NS P+KT ++P + L
Sbjct: 178 KSRTSEDSSNRNCTTPINQSTTTVTVKNETSSDRKNSNQPIKTPCAESTPIALENRLVKT 237
Query: 462 TSQETPKIRHTPVTP 506
++ TP++ H+ TP
Sbjct: 238 SAVTTPQVSHS-TTP 251
>SB_25422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 258
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 318 QNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTP 497
+N + + P+ Y P L E E+ + ++ S + ++ K + PKI+H P
Sbjct: 132 ENHVPTPPLAYTPVRSLKEEQNLRESLQASVEESLESHEQEKKA---KKKNKQPKIKHEP 188
Query: 498 VTPK 509
+PK
Sbjct: 189 ESPK 192
>SB_4802| Best HMM Match : zf-C2H2 (HMM E-Value=9.1e-19)
Length = 374
Score = 29.9 bits (64), Expect = 2.2
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 1/87 (1%)
Frame = +3
Query: 276 QSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLT 455
QSP S + P+N P L + T+ + +K + P + T
Sbjct: 54 QSPSTSSHSVTQQGVTQHTMIPVNQMPLRTTSSGLSNVVTQINSVKIAQSVPVQVASSFT 113
Query: 456 PKTSQETP-KIRHTPVTPK*DHRYHMK 533
K +Q P K+ H+P T H+ H +
Sbjct: 114 VKVTQSLPVKVTHSP-TVSHSHKEHFQ 139
>SB_39472| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 177
Score = 29.5 bits (63), Expect = 2.9
Identities = 19/71 (26%), Positives = 39/71 (54%), Gaps = 12/71 (16%)
Frame = +3
Query: 333 SSPINYKPTSPLIERLKSPETR--NSPLKTMTNSPKSQR----LT------LTPKTSQET 476
+ PIN + +P+ ++ +P+T+ N+P+ N+P +Q+ LT LT + ++
Sbjct: 6 NKPINQQANNPINQQANNPKTQQANNPMTQQANNPINQQANNSLTQQANNPLTQQANKSL 65
Query: 477 PKIRHTPVTPK 509
+ + P+TPK
Sbjct: 66 TQQANNPLTPK 76
>SB_32852| Best HMM Match : bZIP_2 (HMM E-Value=0.58)
Length = 277
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = -1
Query: 717 EQSLASSSLSNFMKVSAIIGSQFSLLDRLYQDLSSNTSLIFNVPLRLRLVRGEGLSRMFS 538
++S+ + + ++ M S +FS++DR + DLS NT + L R + E R F+
Sbjct: 158 DRSVNTDASNDLMDESVNTSVEFSVMDRQFADLSMNTDADIDKELFDRSMNTEPEERDFA 217
Query: 537 AISYDS 520
+ S ++
Sbjct: 218 SHSINT 223
>SB_8676| Best HMM Match : Peptidase_M18 (HMM E-Value=0)
Length = 1161
Score = 29.1 bits (62), Expect = 3.8
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +2
Query: 362 TSDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNT 478
T+ ++K RDQK+ S N D + P I S +NT
Sbjct: 114 TAPERMKEERDQKIKSANRDNCLRKPHIYEFSRLTLQNT 152
>SB_441| Best HMM Match : zf-C2H2 (HMM E-Value=5.5)
Length = 336
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Frame = +3
Query: 282 PGPSKRRILSDIQNSILSSPINYKPT---SPLIERLKSPETRNSPLKTMTN 425
P S +R+ +++++ + P Y+ +P R+K+P+ N P K + N
Sbjct: 146 PRKSVKRMAQELEDNTIPPPPEYRDRPAPTPRARRIKTPQRVNKPDKALVN 196
>SB_41024| Best HMM Match : DIL (HMM E-Value=1.3e-30)
Length = 1440
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/69 (24%), Positives = 31/69 (44%)
Frame = +3
Query: 276 QSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLT 455
+SP + R + +N++ SSP++ + T SP SP + SP + +
Sbjct: 189 ESPPINTARQIETYRNNVSSSPVSVRSTESEHSNKASPRFAISPSRDSPTSPPLRPGSSG 248
Query: 456 PKTSQETPK 482
S+ TP+
Sbjct: 249 SDKSRSTPR 257
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 28.7 bits (61), Expect = 5.1
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +3
Query: 309 SDIQNSILSSPINYKPTSPLIERLKSPET--RNSPLKTMTNSPKSQRLTLTPKTSQETPK 482
+ ++ S+ +SP TS +R KS T + SP + +SPK+ T +S+ +PK
Sbjct: 120 TSLKRSLKTSPKTSLKTSRKTDRKKSRNTSPKRSPKTSSKSSPKTSPKTSLKTSSKTSPK 179
>SB_11602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 440
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 6/48 (12%)
Frame = +3
Query: 384 SPETRNSPL----KTMTNSPKSQRLTLTPKT--SQETPKIRHTPVTPK 509
+PET+++ ++ T +P++Q T TP+T + ETP+ + T TP+
Sbjct: 357 TPETQSTTTTPETQSTTETPETQSPTQTPETQLTTETPETQSTTTTPE 404
>SB_59547| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1516
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 508 LGVTGVCLIFG-VSCEVFGVR-VNLWDFGEFVMVFRGEFLVSGDFNLSIRG 362
LG ++FG C + G+ ++ F E ++++ F G FN+SIRG
Sbjct: 867 LGDGSADVVFGDTQCVIQGITSTHVMSFQEGTVLYKYSFWNEGTFNVSIRG 917
>SB_58772| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 104
Score = 28.3 bits (60), Expect = 6.7
Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 330 LSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTP-KTSQETPKIR 488
+SSP P+SP + ++ ET + P+ T T + ++ ++T KT+Q K R
Sbjct: 4 ISSPEKQTPSSPTVHEYETRET-SEPIVTETETVETTPSSVTKVKTTQTVAKSR 56
>SB_49934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 221
Score = 28.3 bits (60), Expect = 6.7
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +2
Query: 386 TRDQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTYASHTQVRSPLSYEI-AENILDRPS 562
T + +S+N + ++ ++S E +++ +S + LS + ++L R
Sbjct: 14 TTGRNRSSRNAVRSSRDSLLSSFGELDNLSSRKHLLSSRNEDDEDLSSRMDVADLLSRKE 73
Query: 563 PLTSRSLRGTLKIKEVLEDRSWYKRSNKENCEPMMAETFMKFDNEEDAR 709
RSLRG+L + ++DRS R + ++ P + N+ D R
Sbjct: 74 DEECRSLRGSLSSRNDVDDRS--SRDDMDDLSPFNDVDGLSSRNDVDDR 120
>SB_17138| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 1/81 (1%)
Frame = +3
Query: 246 EDVPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPL-IERLKSPETRNSPLKTMT 422
++VP +F QS + LSD N + PT PL E +K + KT
Sbjct: 301 DEVPSKNNFSQSAKAQRNGELSDSDNDLPPVLSRQPPTEPLKKENVKMSRFKELTAKTTK 360
Query: 423 NSPKSQRLTLTPKTSQETPKI 485
+S +L+ ++ P +
Sbjct: 361 SSMGKGSSSLSVSSASSNPSL 381
>SB_5548| Best HMM Match : PT (HMM E-Value=3.1)
Length = 157
Score = 28.3 bits (60), Expect = 6.7
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 426 SPKSQRLTLTPKTSQETPKIRHTPVTPK 509
SPK+ T +PKTSQ+T +I+ TPK
Sbjct: 2 SPKTSPKT-SPKTSQKTMRIKSLKTTPK 28
>SB_42335| Best HMM Match : Hint (HMM E-Value=1.4013e-45)
Length = 825
Score = 27.9 bits (59), Expect = 8.9
Identities = 15/55 (27%), Positives = 25/55 (45%)
Frame = +3
Query: 315 IQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETP 479
+ +S P KPT+ + + P T +PL + + S + TP T + TP
Sbjct: 163 LPSSTPEMPETAKPTTVVTQVTTMPNTSVTPLTSPSTSVTQRTRPTTPVTQEATP 217
>SB_5192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4865
Score = 27.9 bits (59), Expect = 8.9
Identities = 16/39 (41%), Positives = 22/39 (56%)
Frame = +3
Query: 273 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSP 389
DQSP P + R+ S ++S SS +P SP+ R SP
Sbjct: 1922 DQSPRPGRSRVNSPSRDSRRSSG-GSRPPSPVKSRSSSP 1959
>SB_56456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 387 PETRNSPLKTMTNSPKSQRLTLTPKTSQETPK 482
P +R +P +T TN+P+S+R S++TPK
Sbjct: 405 PSSRRNPRETKTNTPRSRR-----SNSRKTPK 431
>SB_54211| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/36 (47%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Frame = +3
Query: 333 SSPINYKPTSPLIERLKSPET-RNSPLKTMTNSPKS 437
SS N KP SP P T RNSP ++ NSP S
Sbjct: 494 SSDTNKKP-SPSQASFSQPSTLRNSPSSSLRNSPSS 528
>SB_51982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 260
Score = 27.9 bits (59), Expect = 8.9
Identities = 17/65 (26%), Positives = 33/65 (50%)
Frame = +3
Query: 282 PGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPK 461
P P+K+R SD+ + + +SP P+I R+ P T+ + T + + +S+ +
Sbjct: 127 PDPAKQRKSSDVSHRLSASP---NSRLPMIRRVSQPATKPT-TGTSSRTDRSRPAPSPAR 182
Query: 462 TSQET 476
+Q T
Sbjct: 183 VNQAT 187
>SB_30378| Best HMM Match : RCSD (HMM E-Value=0.78)
Length = 258
Score = 27.9 bits (59), Expect = 8.9
Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 9/117 (7%)
Frame = +3
Query: 201 NKT*TGRSILAQLQKEDVPHSL-SFDQSPGPSKRRILSDIQNSILSSPIN---YKPTSP- 365
+K T +SI + + K P S+ S+ P S + I S I I+ YKP +P
Sbjct: 75 DKPKTPQSIHSYIDKPKTPQSIHSYIDKP-KSPQSIHSYIDKPKTPQSIHTYIYKPKTPQ 133
Query: 366 ----LIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPK*DHRY 524
I++ K+P++ +S + PKT Q P TP+ H Y
Sbjct: 134 SIHSYIDKPKTPQSIHSYIDKPKTPQSIHTYIYKPKTPQSIHSYIDKPKTPQSIHTY 190
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,187,904
Number of Sequences: 59808
Number of extensions: 422747
Number of successful extensions: 1865
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1762
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1937927537
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -