Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1452
(726 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical... 40 0.001
Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical pr... 33 0.16
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 33 0.16
U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical pr... 32 0.48
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 32 0.48
AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical ... 32 0.48
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 31 0.63
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 31 0.63
AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical ... 31 0.84
U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical pr... 31 1.1
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 31 1.1
U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical pr... 30 1.5
AL032631-13|CAA21577.2| 220|Caenorhabditis elegans Hypothetical... 30 1.5
AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical ... 30 1.9
Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonin... 29 2.6
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 29 2.6
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 29 2.6
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 29 2.6
AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical ... 29 2.6
AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical... 29 2.6
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 29 2.6
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 2.6
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 29 2.6
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 29 2.6
Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 29 3.4
U41991-8|AAA83348.2| 500|Caenorhabditis elegans Hypothetical pr... 29 3.4
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 29 3.4
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 4.5
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 4.5
Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z78198-6|CAB01572.2| 848|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical pr... 28 5.9
U28731-2|AAA68297.1| 658|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 28 5.9
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 5.9
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 5.9
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 5.9
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 5.9
Z72517-2|CAA96694.1| 490|Caenorhabditis elegans Hypothetical pr... 28 7.8
U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal prote... 28 7.8
>AC025727-10|AAK66029.1| 707|Caenorhabditis elegans Hypothetical
protein Y73E7A.8 protein.
Length = 707
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +3
Query: 369 IERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPK 509
IE L SP T + L+T T P++ + T TP+T+ P+ T TP+
Sbjct: 349 IEELMSPPTTTTTLQTTTTRPQTTKTTTTPQTTTTRPQTTKTTTTPQ 395
>Z81460-5|CAB03832.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 97 RCAKMWGESSENCENNCQCSGLITE-NFRINSGNNATKRKQEEAFSHNYKKKMYPTRLAS 273
+CAK+WG + +N + NC TE F N G NA ++ ++ + N K + +
Sbjct: 489 QCAKLWGPTGKNGDENCYRKN--TEGTFHGNCGTNAHTKEIKKCETENAKCGLLQCETQA 546
Query: 274 TKVLAPRSAGSSQTYKTLYSA 336
+ + + ++ T+YS+
Sbjct: 547 ERPVFGDPGSVTFSHSTVYSS 567
>Z70209-3|CAA94147.1| 952|Caenorhabditis elegans Hypothetical
protein C04A11.4 protein.
Length = 952
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Frame = +1
Query: 97 RCAKMWGESSENCENNCQCSGLITE-NFRINSGNNATKRKQEEAFSHNYKKKMYPTRLAS 273
+CAK+WG + +N + NC TE F N G NA ++ ++ + N K + +
Sbjct: 489 QCAKLWGPTGKNGDENCYRKN--TEGTFHGNCGTNAHTKEIKKCETENAKCGLLQCETQA 546
Query: 274 TKVLAPRSAGSSQTYKTLYSA 336
+ + + ++ T+YS+
Sbjct: 547 ERPVFGDPGSVTFSHSTVYSS 567
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 33.5 bits (73), Expect = 0.16
Identities = 25/85 (29%), Positives = 35/85 (41%)
Frame = +3
Query: 255 PHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPK 434
P S F SP P + S + + + P + +E LKSPE SP P
Sbjct: 186 PKSSIFSSSPKPKET---SPFYKTTPTKTFSSTPKNLKLENLKSPEDIKSP------PPI 236
Query: 435 SQRLTLTPKTSQETPKIRHTPVTPK 509
+ TP TS+ T ++ TPK
Sbjct: 237 KKNFVATPSTSKSTASYSYSRETPK 261
>U40419-9|AAA81429.2| 1715|Caenorhabditis elegans Hypothetical protein
C27F2.8 protein.
Length = 1715
Score = 31.9 bits (69), Expect = 0.48
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 294 KRRILSDIQNSILSSPINYKPT--SPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTS 467
K+R +N+ L +PI +P SP ++ P + +P + +QR K
Sbjct: 1263 KKRAAQQKENNNLEAPIIVQPVVQSPPVQNKMEPAKKTTPGPSPKPKGNNQR-----KKH 1317
Query: 468 QETPKIRHTPVTPK 509
+ P + TPVTPK
Sbjct: 1318 VQVPPVTKTPVTPK 1331
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 31.9 bits (69), Expect = 0.48
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +3
Query: 273 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTL 452
D+ P++ +I D +NS S+ KPT+ + + + +P + T S +S LT
Sbjct: 1940 DEKKQPNREKIEIDEENSSSSNSGQEKPTTKERTTVSTTVSTTTPTEETTTS-ESLILTA 1998
Query: 453 TP-KTSQETPKIRHTPVTP 506
P K ++ T + P TP
Sbjct: 1999 APSKPTESTTESSEAPTTP 2017
>AL022270-2|CAB63433.2| 952|Caenorhabditis elegans Hypothetical
protein C26G2.2 protein.
Length = 952
Score = 31.9 bits (69), Expect = 0.48
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +2
Query: 356 YFTSDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRN-TKNQTYASHTQVRSPLSYE 532
+ T+D + VT ++ LT+ ++ T +PE+ S +E T N T + T+ +P+S +
Sbjct: 557 FTTTDNIVSVTTNEILTTTIEEQTTTLPEVYSTTETPTENPLTTVTEQTVTEATTPISLQ 616
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 276 QSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQR 443
+SP P +RR S+ SP +P SP R +S + P + + SP+ R
Sbjct: 156 RSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRRSR 211
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +3
Query: 276 QSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQR 443
+SP P +RR S+ SP +P SP R +S + P + + SP+ R
Sbjct: 156 RSPSPKRRRRPSEKPRKRSRSPRRERPRSPKRSREESRKLSRKPSSSRSKSPRRSR 211
>AF106582-4|AAC78219.1| 456|Caenorhabditis elegans Hypothetical
protein W05F2.6 protein.
Length = 456
Score = 31.1 bits (67), Expect = 0.84
Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 2/80 (2%)
Frame = +3
Query: 276 QSPGPSKRRILSDIQNSILSSPINYKPTSPLIE--RLKSPETRNSPLKTMTNSPKSQRLT 449
++P P+ +++L ++QN +++ + P E LK+PE P + ++
Sbjct: 146 RTPEPTVQQVLEELQNDVVNPKSSTTPEGYSFELRNLKTPEIPAMPTPLACSPAAARNSP 205
Query: 450 LTPKTSQETPKIRHTPVTPK 509
+ K P + P P+
Sbjct: 206 VVKKIQNHVPNVTLVPSEPR 225
>U97593-1|AAB52875.1| 715|Caenorhabditis elegans Hypothetical
protein C46G7.3 protein.
Length = 715
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 312 DIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTP 458
+++ + SPI Y +S RL T + L+ TNSP++ +T P
Sbjct: 280 NLREELNLSPIRYPASSTPHNRLTFAPTNTNRLQDTTNSPRTNDVTFVP 328
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Frame = +3
Query: 243 KEDVPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTS-PLIERLKSPETRNSPL--- 410
K +V + FD+ ++ R L + ++ ++P PTS P R++SP T S +
Sbjct: 757 KSEVTATTKFDRLKYMAEFRKLLALPDNFSTTPKQSSPTSSPTTTRMRSPSTHKSTVSQA 816
Query: 411 -KTMTNSPKSQRLT 449
KT +++P+S T
Sbjct: 817 TKTASSTPQSPSTT 830
>U23527-5|AAC46572.2| 915|Caenorhabditis elegans Hypothetical
protein K09E2.1 protein.
Length = 915
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/28 (46%), Positives = 20/28 (71%)
Frame = +3
Query: 396 RNSPLKTMTNSPKSQRLTLTPKTSQETP 479
+ +PL+T ++S SQRLT T K+S +P
Sbjct: 509 KTTPLETSSSSSTSQRLTTTTKSSTTSP 536
>AL032631-13|CAA21577.2| 220|Caenorhabditis elegans Hypothetical
protein Y106G6H.14 protein.
Length = 220
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 518 PLSYEIAENILDRPSPLTSRSLRGTL-KIKEVLEDRSWYKRSNKENCEPM 664
P +Y I+EN+ + P+PL + RG + + E L +R +K P+
Sbjct: 68 PANYVISENVEELPNPLHEAARRGNMDMLAECLRERVSVNSLDKSGATPL 117
>AC024869-5|AAK68606.3| 1126|Caenorhabditis elegans Hypothetical
protein Y75B7AL.4a protein.
Length = 1126
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +3
Query: 264 LSFDQSPGPSKRRILSDIQNS-ILSSPINYKPTSPLIERLKSPETRNSPLKTMT---NSP 431
+S ++P S+R+ + + S SP++ P+S + R S + LK +T NSP
Sbjct: 735 ISVTRTPSLSRRQSRARLSYSKATESPLDM-PSSDV--RRDSGSLMSPLLKHVTITNNSP 791
Query: 432 KSQRLTLTPKTSQETPKIRHT 494
SQ +T +P+T+ TPK HT
Sbjct: 792 PSQVITSSPRTNHLTPK-SHT 811
>Z71185-3|CAA94905.2| 427|Caenorhabditis elegans Hypothetical
protein C35A5.4 protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Frame = +3
Query: 270 FDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPL-------KTMTNS 428
FD++P P+ ++ S ++ SP + K P N L K +++S
Sbjct: 298 FDRTPTPTTKKTQSVTPSNSTPSPAKPATPTKTPTPTKKPVENNETLSQVKTVSKALSHS 357
Query: 429 PKSQRLTLTPKTSQETPKI--RHTPVTPK*DHRYH 527
PKS + K++ +PK+ + T TP D H
Sbjct: 358 PKSPKKNSQEKSAPPSPKLPPKTTAPTPTKDGGNH 392
>Z38016-1|CAA86114.1| 856|Caenorhabditis elegans serine/threonine
kinase protein.
Length = 856
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 282 PGPSKRRILSDIQNSILSSPINYKPTS--PLIERLKSPETRN-SPLKTMTNSPKSQRLTL 452
P PSKR IL ++ +L++ P S P+ +R S + + +P++ + SP+ QR +
Sbjct: 281 PSPSKR-ILESARSPLLANRRIITPQSSLPVPKRAGSTKLDSPTPVRRIGESPRVQRRVI 339
Query: 453 TPKTSQETP 479
TP P
Sbjct: 340 TPGMPSPVP 348
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/93 (23%), Positives = 36/93 (38%)
Frame = +2
Query: 374 KIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTYASHTQVRSPLSYEIAENILD 553
K K + S+ D + E S++ T+ A H Q S ++ I
Sbjct: 9990 KKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVSEADKA-HKQKESDEKQKLESEIAA 10048
Query: 554 RPSPLTSRSLRGTLKIKEVLEDRSWYKRSNKEN 652
+ S L K K+V+ED S K+ +E+
Sbjct: 10049 KKSAEQKSKLETEAKTKKVIEDESAKKQKEQED 10081
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/93 (23%), Positives = 36/93 (38%)
Frame = +2
Query: 374 KIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTYASHTQVRSPLSYEIAENILD 553
K K + S+ D + E S++ T+ A H Q S ++ I
Sbjct: 10010 KKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVSEADKA-HKQKESDEKQKLESEIAA 10068
Query: 554 RPSPLTSRSLRGTLKIKEVLEDRSWYKRSNKEN 652
+ S L K K+V+ED S K+ +E+
Sbjct: 10069 KKSAEQKSKLETEAKTKKVIEDESAKKQKEQED 10101
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/93 (23%), Positives = 36/93 (38%)
Frame = +2
Query: 374 KIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTYASHTQVRSPLSYEIAENILD 553
K K + S+ D + E S++ T+ A H Q S ++ I
Sbjct: 10010 KKKTEKSDSSISQKSDTAKTVAESAGQSDSETQKVSEADKA-HKQKESDEKQKLESEIAA 10068
Query: 554 RPSPLTSRSLRGTLKIKEVLEDRSWYKRSNKEN 652
+ S L K K+V+ED S K+ +E+
Sbjct: 10069 KKSAEQKSKLETEAKTKKVIEDESAKKQKEQED 10101
>AL117207-1|CAB60406.1| 856|Caenorhabditis elegans Hypothetical
protein Y60A3A.1 protein.
Length = 856
Score = 29.5 bits (63), Expect = 2.6
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +3
Query: 282 PGPSKRRILSDIQNSILSSPINYKPTS--PLIERLKSPETRN-SPLKTMTNSPKSQRLTL 452
P PSKR IL ++ +L++ P S P+ +R S + + +P++ + SP+ QR +
Sbjct: 281 PSPSKR-ILESARSPLLANRRIITPQSSLPVPKRAGSTKLDSPTPVRRIGESPRVQRRVI 339
Query: 453 TPKTSQETP 479
TP P
Sbjct: 340 TPGMPSPVP 348
>AL117195-12|CAB60765.1| 425|Caenorhabditis elegans Hypothetical
protein Y57A10A.19 protein.
Length = 425
Score = 29.5 bits (63), Expect = 2.6
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Frame = +3
Query: 219 RSILAQLQKEDVPHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETR 398
RS+ Q Q+ED + P +RR D S + SP +ER KSP+ R
Sbjct: 273 RSVERQDQREDRRDRRRSPEDPR-ERRRSPEDRTVRRRSPERRRQQRSPSVERRKSPQRR 331
Query: 399 NSPLKTMTNSPKSQRLTLT--PKTSQETPKIRHTPVTPK*DH 518
+ + +S +R T T K+ + +++ P + D+
Sbjct: 332 DERRRRHDSSENERRSTATASKKSRMDELEVKQEPPSDSEDY 373
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 390 ETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPK 509
ET +P ++ +P LT + +TPK TP TPK
Sbjct: 443 ETPATPRSSVPATPTESNLTTPAPKTPKTPKTPRTPRTPK 482
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 390 ETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPK 509
ET +P ++ +P LT + +TPK TP TPK
Sbjct: 393 ETPATPRSSVPATPTESNLTTPAPKTPKTPKTPRTPRTPK 432
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 390 ETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPK 509
ET +P ++ +P LT + +TPK TP TPK
Sbjct: 443 ETPATPRSSVPATPTESNLTTPAPKTPKTPKTPRTPRTPK 482
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +3
Query: 390 ETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPK 509
ET +P ++ +P LT + +TPK TP TPK
Sbjct: 443 ETPATPRSSVPATPTESNLTTPAPKTPKTPKTPRTPRTPK 482
>Z81058-7|CAB02920.1| 1011|Caenorhabditis elegans Hypothetical
protein F11E6.7 protein.
Length = 1011
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = +3
Query: 273 DQSPGPSKRRILSDIQN-SILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLT 449
D SP P+ I ++ S +S+ + + T P + K+PE SP ++++ S T
Sbjct: 775 DNSP-PANEVIAQELPKASPISNTPSVESTQPALNVQKTPEASQSPASPISSNTGSSTFT 833
Query: 450 LTPKTSQE 473
+ P Q+
Sbjct: 834 VDPTPVQK 841
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 29.1 bits (62), Expect = 3.4
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 12/101 (11%)
Frame = +3
Query: 255 PHSLSFDQSPGPSKRRILSDIQNSILSSPINYKPTSPLIE-----RLKSPETRN------ 401
P ++ + P S L D Q + +S + +SP E R +SPE N
Sbjct: 372 PEVINVYKEPSRSHANELYDSQKNQYTSHEGHSTSSPTAENRQCHRSRSPEQSNFRPSQT 431
Query: 402 -SPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVTPK*DHR 521
L +M + + P ++ P IR TP+ DHR
Sbjct: 432 VPGLSSMEQRKAHENVDWGPHRTKNVPPIRSATETPETDHR 472
>Z68314-9|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 321 NSILSSPIN-YKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTP 497
N I N +KP E+++ + P MT SP+ L PK Q+ I TP
Sbjct: 736 NQIFKDKYNRWKPGMSRAEKIEHAHYQFDPSNQMTGSPREYHLKDLPKKIQKYESILPTP 795
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 321 NSILSSPIN-YKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTP 497
N I N +KP E+++ + P MT SP+ L PK Q+ I TP
Sbjct: 736 NQIFKDKYNRWKPGMSRAEKIEHAHYQFDPSNQMTGSPREYHLKDLPKKIQKYESILPTP 795
>U41991-8|AAA83348.2| 500|Caenorhabditis elegans Hypothetical
protein C42D4.2 protein.
Length = 500
Score = 29.1 bits (62), Expect = 3.4
Identities = 32/118 (27%), Positives = 43/118 (36%), Gaps = 7/118 (5%)
Frame = +2
Query: 383 VTRDQKLTSKN---HDKLTKIPEINSHSENFTRNTKNQTYASHTQ---VRSPLSYEIAEN 544
V DQ + N D L + S NF N K T H+ V S LS+ N
Sbjct: 84 VVEDQSIAPNNLALFDMLQAMEFAKSDIHNFGGNNKRTTLLGHSYGGTVASMLSFSTKVN 143
Query: 545 I-LDRPSPLTSRSLRGTLKIKEVLEDRSWYKRSNKENCEPMMAETFMKFDNEEDARDC 715
L S S E+ +R+ Y+ + NC P ++ K E RDC
Sbjct: 144 TDLSLFQQYISMSSPTNFDTLELQVERT-YRFAEHANCLPKNSKFMRKNQKEVYMRDC 200
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 321 NSILSSPIN-YKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTP 497
N I N +KP E+++ + P MT SP+ L PK Q+ I TP
Sbjct: 736 NQIFKDKYNRWKPGMSRAEKIEHAHYQFDPSNQMTGSPREYHLKDLPKKIQKYESILPTP 795
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +3
Query: 279 SPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKS-QRLTLT 455
SP PS + S ++ S+ PT+ L+ +P T+ P + ++SP S T+T
Sbjct: 364 SPIPSTTQTSSSAPSTYTSN-FTPSPTTTLLTSTIAPSTQGVPTSSKSSSPNSTPTTTIT 422
Query: 456 PKTSQET 476
P T
Sbjct: 423 PGAPSST 429
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 28.7 bits (61), Expect = 4.5
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 4/55 (7%)
Frame = +3
Query: 357 TSPLIERLKSPETRNSPLKTMTNSPKSQRLT----LTPKTSQETPKIRHTPVTPK 509
T P +KS T + +K+ +P + + T TP T + TP TP T K
Sbjct: 151 TKPTPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMK 205
>Z83228-2|CAB05733.1| 370|Caenorhabditis elegans Hypothetical
protein F52F12.2 protein.
Length = 370
Score = 28.3 bits (60), Expect = 5.9
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 270 FDQSPGPSKRRILSDIQNSILSSPINYK-PTSPLIERLKSPETRNSPLKTMTNSPKSQRL 446
FD P RR S + S SSPI+ SP + L T +S T++ S +
Sbjct: 264 FDSGYCPCPRRSSSRVSPSGGSSPISDTFIASPTL--LPPSTTLSSTPPTISPSAPTLLP 321
Query: 447 TLTPKTSQETPKIRHTPVTP 506
T +PK+ +ETP R P
Sbjct: 322 TRSPKSREETPTRREEQQVP 341
>Z78198-6|CAB01572.2| 848|Caenorhabditis elegans Hypothetical
protein F55C5.7 protein.
Length = 848
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 464 FTRNTKNQTYASHTQVRSPLSYEIAENILDRPSPLTSRS 580
F K +TY +H + + Y+ + +ILD+P+ +S S
Sbjct: 146 FVEKAKEKTYTAHEITGNEVFYDNSSSILDQPNTNSSDS 184
>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
protein K08E7.5a protein.
Length = 1221
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 1/86 (1%)
Frame = +3
Query: 255 PHSLSFDQSPGPSKRRILSDIQN-SILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSP 431
P ++ P + R S ++ + L +P + + L++ ++P S T T+
Sbjct: 399 PRPRDYEDGPQETTRTKASGTKSPNSLQAP--QQTAAHLMKNARAPGPEPSLHSTTTHHV 456
Query: 432 KSQRLTLTPKTSQETPKIRHTPVTPK 509
++ +T+ PK S+ +P + +TPK
Sbjct: 457 QTPIITIAPKFSEPSPYAENIMLTPK 482
>Z68760-2|CAA92995.1| 597|Caenorhabditis elegans Hypothetical
protein F36H1.3 protein.
Length = 597
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 1/79 (1%)
Frame = +3
Query: 273 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTL 452
D PS + + + SP P +E+ +P SPL + +SP Q +
Sbjct: 489 DDGAQPSSAPVHTPPAPPAIPSPAKLPTAPPPVEKPVTPSPSASPLPSPVSSPAPQLVQK 548
Query: 453 -TPKTSQETPKIRHTPVTP 506
T T P + P P
Sbjct: 549 PTTPTDASKPFVAQPPFAP 567
>U28731-2|AAA68297.1| 658|Caenorhabditis elegans Hypothetical
protein F12A10.4 protein.
Length = 658
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +2
Query: 479 KNQTYASHTQVRSPLSYEIAENILDRPSPLTSRSLRGTLKIKEVL 613
KN+ + SH ++ P E + + +RP P T ++ TL I +L
Sbjct: 17 KNKNHVSHVEIGVPDPIEELQKLQNRPEPCTVLAVITTLVILVLL 61
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 28.3 bits (60), Expect = 5.9
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +3
Query: 387 PETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTP 497
PET +P+ + ++ LTP Q+ P HTP
Sbjct: 880 PETTLTPIVLPRKKQRIEKKKLTPPPPQQAPVTSHTP 916
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 243 KEDVPHSLSFDQSPGPSK-RRILSDIQNSILSSPINYKPTS-PLIERLKSPETRNSPL-- 410
K +V + FD+ ++ R+ L + ++ ++P PTS P R++SP T S +
Sbjct: 354 KSEVTATTKFDRLKYMAEFRKKLLALPDNFSTTPKQSSPTSSPTTTRMRSPSTHKSTVSQ 413
Query: 411 --KTMTNSPKSQRLT 449
KT +++P+S T
Sbjct: 414 ATKTASSTPQSPSTT 428
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 243 KEDVPHSLSFDQSPGPSK-RRILSDIQNSILSSPINYKPTS-PLIERLKSPETRNSPL-- 410
K +V + FD+ ++ R+ L + ++ ++P PTS P R++SP T S +
Sbjct: 568 KSEVTATTKFDRLKYMAEFRKKLLALPDNFSTTPKQSSPTSSPTTTRMRSPSTHKSTVSQ 627
Query: 411 --KTMTNSPKSQRLT 449
KT +++P+S T
Sbjct: 628 ATKTASSTPQSPSTT 642
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 243 KEDVPHSLSFDQSPGPSK-RRILSDIQNSILSSPINYKPTS-PLIERLKSPETRNSPL-- 410
K +V + FD+ ++ R+ L + ++ ++P PTS P R++SP T S +
Sbjct: 704 KSEVTATTKFDRLKYMAEFRKKLLALPDNFSTTPKQSSPTSSPTTTRMRSPSTHKSTVSQ 763
Query: 411 --KTMTNSPKSQRLT 449
KT +++P+S T
Sbjct: 764 ATKTASSTPQSPSTT 778
>AF067945-7|ABQ13059.1| 954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform i protein.
Length = 954
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 243 KEDVPHSLSFDQSPGPSK-RRILSDIQNSILSSPINYKPTS-PLIERLKSPETRNSPL-- 410
K +V + FD+ ++ R+ L + ++ ++P PTS P R++SP T S +
Sbjct: 753 KSEVTATTKFDRLKYMAEFRKKLLALPDNFSTTPKQSSPTSSPTTTRMRSPSTHKSTVSQ 812
Query: 411 --KTMTNSPKSQRLT 449
KT +++P+S T
Sbjct: 813 ATKTASSTPQSPSTT 827
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 243 KEDVPHSLSFDQSPGPSK-RRILSDIQNSILSSPINYKPTS-PLIERLKSPETRNSPL-- 410
K +V + FD+ ++ R+ L + ++ ++P PTS P R++SP T S +
Sbjct: 753 KSEVTATTKFDRLKYMAEFRKKLLALPDNFSTTPKQSSPTSSPTTTRMRSPSTHKSTVSQ 812
Query: 411 --KTMTNSPKSQRLT 449
KT +++P+S T
Sbjct: 813 ATKTASSTPQSPSTT 827
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 243 KEDVPHSLSFDQSPGPSK-RRILSDIQNSILSSPINYKPTS-PLIERLKSPETRNSPL-- 410
K +V + FD+ ++ R+ L + ++ ++P PTS P R++SP T S +
Sbjct: 753 KSEVTATTKFDRLKYMAEFRKKLLALPDNFSTTPKQSSPTSSPTTTRMRSPSTHKSTVSQ 812
Query: 411 --KTMTNSPKSQRLT 449
KT +++P+S T
Sbjct: 813 ATKTASSTPQSPSTT 827
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 243 KEDVPHSLSFDQSPGPSK-RRILSDIQNSILSSPINYKPTS-PLIERLKSPETRNSPL-- 410
K +V + FD+ ++ R+ L + ++ ++P PTS P R++SP T S +
Sbjct: 745 KSEVTATTKFDRLKYMAEFRKKLLALPDNFSTTPKQSSPTSSPTTTRMRSPSTHKSTVSQ 804
Query: 411 --KTMTNSPKSQRLT 449
KT +++P+S T
Sbjct: 805 ATKTASSTPQSPSTT 819
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 28.3 bits (60), Expect = 5.9
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 243 KEDVPHSLSFDQSPGPSK-RRILSDIQNSILSSPINYKPTS-PLIERLKSPETRNSPL-- 410
K +V + FD+ ++ R+ L + ++ ++P PTS P R++SP T S +
Sbjct: 757 KSEVTATTKFDRLKYMAEFRKKLLALPDNFSTTPKQSSPTSSPTTTRMRSPSTHKSTVSQ 816
Query: 411 --KTMTNSPKSQRLT 449
KT +++P+S T
Sbjct: 817 ATKTASSTPQSPSTT 831
>Z72517-2|CAA96694.1| 490|Caenorhabditis elegans Hypothetical
protein T28F4.3 protein.
Length = 490
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 380 KVTRDQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTYASHTQVRSPLS 526
K+ +KLT KN D + P + E T K++ V+ PLS
Sbjct: 409 KLQGPRKLTLKNRDGNAEEPTAKDNEERSTAEDKSKNRQKSVYVKMPLS 457
>U40799-7|AAA81485.1| 208|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 8 protein.
Length = 208
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 582 RLRLVRGEGLSRMFSAISYDSGDLTW 505
R+RLVR G + + A+ DSG+ +W
Sbjct: 42 RVRLVRTRGGNEKYRALRLDSGNFSW 67
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,027,579
Number of Sequences: 27780
Number of extensions: 334347
Number of successful extensions: 1539
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1527
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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