Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1452
(726 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 30 1.4
At4g32790.1 68417.m04665 exostosin family protein contains Pfam ... 30 1.8
At1g51170.1 68414.m05754 protein kinase family protein 29 2.4
At5g18570.1 68418.m02195 GTP1/OBG family protein similar to SP|P... 29 3.1
At4g09060.1 68417.m01493 expressed protein 29 3.1
At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664... 29 4.1
At1g74160.1 68414.m08589 expressed protein 29 4.1
At1g69720.1 68414.m08023 heme oxygenase 3 (HO3) similar to heme ... 29 4.1
At5g44970.1 68418.m05515 hypothetical protein contains a novel d... 28 5.5
At5g24220.1 68418.m02850 lipase class 3-related 28 5.5
At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR... 28 5.5
At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR... 28 5.5
At1g76740.1 68414.m08931 expressed protein weak similarity to fi... 28 5.5
At5g53870.1 68418.m06701 plastocyanin-like domain-containing pro... 28 7.2
At3g18890.1 68416.m02399 expressed protein similar to UV-B and o... 28 7.2
At1g47900.1 68414.m05334 expressed protein 28 7.2
At1g27720.1 68414.m03388 transcription initiation factor IID (TF... 28 7.2
At1g20760.1 68414.m02600 calcium-binding EF hand family protein ... 28 7.2
At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:4... 28 7.2
At5g47070.1 68418.m05800 protein kinase, putative similar to pro... 27 9.6
At5g40300.1 68418.m04888 integral membrane protein, putative MtN... 27 9.6
At3g10070.1 68416.m01207 transcription initiation factor IID (TF... 27 9.6
At2g32680.1 68415.m03995 disease resistance family protein conta... 27 9.6
At1g63550.1 68414.m07184 hypothetical protein low similarity to ... 27 9.6
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 30.3 bits (65), Expect = 1.4
Identities = 23/79 (29%), Positives = 34/79 (43%)
Frame = +3
Query: 273 DQSPGPSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTL 452
++SP P + + + S+P KP SP E K+ + + P SPK +
Sbjct: 438 EESPKPQQPSPKPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPKQE---- 493
Query: 453 TPKTSQETPKIRHTPVTPK 509
PK Q PK P +PK
Sbjct: 494 APKPEQPKPK----PESPK 508
>At4g32790.1 68417.m04665 exostosin family protein contains Pfam
domain, PF03016: Exostosin family
Length = 593
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 287 PLEAQDPLRHTKLYTQLTN*LQTYFTSDRKIKV 385
PL DPL HT LY L+ ++Y ++K+KV
Sbjct: 237 PLIENDPLLHTPLYWNLSMFKRSYELMEKKLKV 269
>At1g51170.1 68414.m05754 protein kinase family protein
Length = 404
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +3
Query: 330 LSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHTPVT 503
LS +N KPT P L PE +P ++++ KS R+ K ++T R P+T
Sbjct: 174 LSCSLN-KPTRPEFYHLSDPEPDPNPESNLSHNKKSLRIFRQKK--KKTKSARVNPIT 228
>At5g18570.1 68418.m02195 GTP1/OBG family protein similar to
SP|P20964 Spo0B-associated GTP-binding protein {Bacillus
subtilis}; contains Pfam profile PF01018: GTP1/OBG
family
Length = 681
Score = 29.1 bits (62), Expect = 3.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 365 SDRKIKVTRDQKLTSKNHDKLTKIPEINSHSENFTRNTKNQTY 493
S RK K+ R+ +L S+ DKL + + + +TR + Y
Sbjct: 37 SPRKTKLQREVELKSRGGDKLQPVSDAGGEATTYTRLPPREDY 79
>At4g09060.1 68417.m01493 expressed protein
Length = 341
Score = 29.1 bits (62), Expect = 3.1
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 297 RRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMT--NSPKSQRLTLTP 458
R++L Q+ + S+ N S + KSP+T +SP++ +SP+ R L+P
Sbjct: 273 RKLLRQQQSPLCSADKNRNSASAKSNKRKSPKTMSSPVEKRLEFSSPEISRKPLSP 328
>At4g11670.1 68417.m01865 expressed protein contains Pfam PF05664:
Protein of unknown function (DUF810)
Length = 985
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 335 LTN*LQTYFTSDRKIKVTRDQKLTSKNHDKLTKIPEI-NSHSE 460
LTN ++ Y T RKI+ + L+ K DK P+I N+HSE
Sbjct: 189 LTNSVEAYPTHRRKIEKSSRLMLSLKRKDKPHLQPQISNTHSE 231
>At1g74160.1 68414.m08589 expressed protein
Length = 1030
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 291 SKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQR 443
S+ R+ S N + SPI + L+E+ P + P+ ++T K +R
Sbjct: 472 SRTRVQSSSSNQVYQSPIVIMKPAKLVEKAGIPASSLIPIHSLTGIKKIRR 522
>At1g69720.1 68414.m08023 heme oxygenase 3 (HO3) similar to heme
oxygenase 3 [Arabidopsis thaliana]
gi|14485563|gb|AAK63006
Length = 285
Score = 28.7 bits (61), Expect = 4.1
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Frame = +2
Query: 500 HTQVRSPLSYEIAENILDRPSPLTSRSLRGT-LKIKEVL-EDRSWYKRSNKENCEPMM-A 670
H V S L Y+ E I+D + T + T L+ E L +D W+K E EPM
Sbjct: 121 HFLVDSKLVYDTLEGIIDGSNFPTYAGFKNTGLERAESLRKDLEWFKEQGYEIPEPMAPG 180
Query: 671 ETFMKF-----DNEEDARDCSF 721
+T+ ++ +N+ A C F
Sbjct: 181 KTYSEYLKDLAENDPQAFICHF 202
>At5g44970.1 68418.m05515 hypothetical protein contains a novel
domain with similarity to F-box domain;
Length = 389
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +3
Query: 360 SPLIERLKSPETRNSPLKTMTNSP 431
SP++++LK P +SP+ TMTN P
Sbjct: 344 SPILKKLK-PSFTDSPMSTMTNLP 366
>At5g24220.1 68418.m02850 lipase class 3-related
Length = 376
Score = 28.3 bits (60), Expect = 5.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 6 FIPFILVDN*TILDCYDNGLVILVF*IRIKTLCQN 110
F F LV+ T++D YD+ + VF ++ LCQN
Sbjct: 79 FFNFSLVE--TLIDDYDSSIYGAVFEYKLSNLCQN 111
>At4g19510.2 68417.m02870 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 356 YFTSDRKIKVTRDQKLTSKNHDKLTKIPEIN 448
Y R + +TRD+KL KN D +P +N
Sbjct: 317 YRQGSRIVIITRDKKLLQKNADATYVVPRLN 347
>At4g19510.1 68417.m02869 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1049
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 356 YFTSDRKIKVTRDQKLTSKNHDKLTKIPEIN 448
Y R + +TRD+KL KN D +P +N
Sbjct: 317 YRQGSRIVIITRDKKLLQKNADATYVVPRLN 347
>At1g76740.1 68414.m08931 expressed protein weak similarity to
fimbriae-associated protein Fap1 (GI:3929312)
[Streptococcus parasanguinis]; weak similarity to 1MDa_1
protein (GI:24620455) [Caenorhabditis elegans]
Length = 1532
Score = 28.3 bits (60), Expect = 5.5
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Frame = +3
Query: 225 ILAQLQKEDVPHSLSFDQSPGPSKRRILSDIQNSIL-SSPINYKPTSP-LIERLKSPETR 398
+L+ + DVPHSL D P +++ + +L S + P SP L + E+R
Sbjct: 1109 VLSDVLAADVPHSLMGDSEPDEAEKTSVEIKDVELLGESNSSTNPESPTLFGNSELDESR 1168
Query: 399 NSPLKT-----MTNSPKSQRLTLTPKTSQE 473
+S T +T SP+ + L K Q+
Sbjct: 1169 DSSAATCEEAFVTTSPEKELLINPGKQEQK 1198
>At5g53870.1 68418.m06701 plastocyanin-like domain-containing
protein contains similarity to SP|Q02917 Early nodulin
55-2 precursor {Glycine max}; PF02298: Plastocyanin-like
domain
Length = 370
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 333 SSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETP 479
SSP P +P +SP +SP + +P Q L P S+ TP
Sbjct: 283 SSPAQ-SPATPSPMTPQSPSPVSSPSPDQSAAPSDQSTPLAPSPSETTP 330
>At3g18890.1 68416.m02399 expressed protein similar to UV-B and
ozone similarly regulated protein 1 UOS1 [Pisum sativum]
GI:20339364
Length = 641
Score = 27.9 bits (59), Expect = 7.2
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 288 PSKRRILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTS 467
PSKR + + S+ + + PT P+ + +P+ +P K P+ L+P S
Sbjct: 327 PSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKEDEAPPKEKNVKPR----PLSPYAS 382
Query: 468 QETPKIRHTPV 500
E K +P+
Sbjct: 383 YEDLKPPTSPI 393
>At1g47900.1 68414.m05334 expressed protein
Length = 1054
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
Frame = +3
Query: 306 LSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLK-------TMTNSPKSQRLTLTPKT 464
L++ Q +I K P E+++SP+TRN T T+ PK+ + +
Sbjct: 934 LAECQETIFVLGKQLKSFRPQPEQMRSPQTRNESYSEEEELGTTTTSVPKNYAVVDEGDS 993
Query: 465 SQETPKIRHTPVTP 506
E P+ +P P
Sbjct: 994 VNEVPRFMESPKCP 1007
>At1g27720.1 68414.m03388 transcription initiation factor IID
(TFIID) component TAF4 family protein contains Pfam
profile PF05236: Transcription initiation factor TFIID
component TAF4 family
Length = 682
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +3
Query: 318 QNSI-LSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPKIRHT 494
+N+I +SS + + S + S + +S +MT S + P S+ PKI +
Sbjct: 336 KNAIPISSNDDLEKQSSKMGLFTSTTSASSVFPSMTTQLDSSTMVNMPAPSETIPKIANV 395
Query: 495 PVTPK 509
VTPK
Sbjct: 396 TVTPK 400
>At1g20760.1 68414.m02600 calcium-binding EF hand family protein
contains INTERPRO:IPR002048 calcium-binding EF-hand
domain
Length = 1019
Score = 27.9 bits (59), Expect = 7.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 455 SENFTRNTKNQTYASHTQVRSPLSYEIAENILDRPSPLTSRSLRGTLKIKEVLEDRSW 628
SE R+ +++ +H++ RSP ++ N + PSP S+ K E +D +W
Sbjct: 753 SETSDRHHESEYGTTHSEDRSPRDSPVSRNATEVPSPDYSQG-----KNSEFFDDSNW 805
>At1g17580.1 68414.m02165 myosin, putative similar to myosin GI:433663
from (Arabidopsis thaliana)
Length = 1520
Score = 27.9 bits (59), Expect = 7.2
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 4/41 (9%)
Frame = +3
Query: 372 ERLKSPETRNSPLK--TMTNSPKSQRLTLTPKTS--QETPK 482
E++ S E+ N L+ T+T SP ++ L L PKT+ Q TP+
Sbjct: 1032 EKVFSLESENKVLRQQTLTISPTTRALALRPKTTIIQRTPE 1072
>At5g47070.1 68418.m05800 protein kinase, putative similar to
protein kinase [Lophopyrum elongatum]
gi|13022177|gb|AAK11674
Length = 410
Score = 27.5 bits (58), Expect = 9.6
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 193 NNATKRKQEEAFSHNYKKKMYPTRLASTKVLAPRSAGSSQTYKTLYSAHQ 342
NN KRK +E ++ + + +S + PRS S ++ K LY+ +
Sbjct: 19 NNKNKRKGKELLQNSAPELTNRSETSSFNLQTPRSLPSPRSIKDLYTERE 68
>At5g40300.1 68418.m04888 integral membrane protein, putative MtN24
gene, Medicago truncatula, EMBL:MTY15290; contains Pfam
PF04535 : Domain of unknown function (DUF588); contains
4 transmembrane domains; similar to putative ethylene
responsive element binding protein (GI:22135858)
[Arabidopsis thaliana]
Length = 270
Score = 27.5 bits (58), Expect = 9.6
Identities = 26/105 (24%), Positives = 43/105 (40%)
Frame = +3
Query: 168 RKLQDKFR*QRNKT*TGRSILAQLQKEDVPHSLSFDQSPGPSKRRILSDIQNSILSSPIN 347
+K Q K + Q+ K I ++ HSL P LS I +S SSP
Sbjct: 8 QKFQKKKKQQQEKQDQSSPINFEMSSRSSLHSLPQTTIESPPDSPTLSSIPDSHGSSPHT 67
Query: 348 YKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETPK 482
PT P + + ++P + + S ++L + +S TP+
Sbjct: 68 IIPT-PSVAKTETPFRVTNGEEEKKVSESRRQLRPSFSSSSSTPR 111
>At3g10070.1 68416.m01207 transcription initiation factor IID
(TFIID) subunit A family protein similar to hypothetical
protein GB:CAB10099 [Schizosaccharomyces pombe];
contains Pfam profile PF03847: Transcription initiation
factor TFIID subunit A
Length = 539
Score = 27.5 bits (58), Expect = 9.6
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +2
Query: 494 ASHTQVRSPLSYEIAENILDRPSPLTSRSLRGT 592
AS T +SP++ + L RPSP++S +++ T
Sbjct: 234 ASSTSTQSPVAQNFQGHSLMRPSPISSPNVQST 266
>At2g32680.1 68415.m03995 disease resistance family protein contains
leucine rich-repeat (LRR) domains Pfam:PF00560,
INTERPRO:IPR001611; similar to Cf-2.2 [Lycopersicon
pimpinellifolium] gi|1184077|gb|AAC15780
Length = 890
Score = 27.5 bits (58), Expect = 9.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 653 CEPMMAETFMKFDNEEDARDCS 718
C P + F KF NE D R C+
Sbjct: 37 CRPHQIQAFTKFTNEFDTRGCN 58
>At1g63550.1 68414.m07184 hypothetical protein low similarity to
receptor-like protein kinase 5 [Arabidopsis thaliana]
GI:13506747; contains Pfam profile: PF01657 Domain of
unknown function DUF26
Length = 299
Score = 27.5 bits (58), Expect = 9.6
Identities = 19/60 (31%), Positives = 28/60 (46%)
Frame = +3
Query: 300 RILSDIQNSILSSPINYKPTSPLIERLKSPETRNSPLKTMTNSPKSQRLTLTPKTSQETP 479
+ L Q S+L SP P SP +SP ++SP ++ +P S L TP + P
Sbjct: 213 KCLLRFQTSVLLSP----PPSPSAPPPRSPPPKSSPPSSLPQTP-SPPLVFTPPQNVPNP 267
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,111,486
Number of Sequences: 28952
Number of extensions: 309874
Number of successful extensions: 1128
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1584903024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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