Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1451
         (726 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     28   0.078
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   9.0  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 28.3 bits (60), Expect = 0.078
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = -2

Query: 284 FYSVSNYIWLSVTNWTDNAISIFTEEHITFT 192
           FY V  Y+ L++  W D  I +F  E +  T
Sbjct: 49  FYEVFRYLELAMIRWKDTEIGLFLHEELRRT 79


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -3

Query: 637 SIRPTGVSSRXTSPDTSLRLGLS*RHV 557
           S+ PT  +S  T P T+    +S +H+
Sbjct: 377 SLVPTTTASPTTEPSTTTSTTISQKHI 403


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,980
Number of Sequences: 438
Number of extensions: 4240
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22535775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)