Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1449
(767 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 203 1e-52
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 203 1e-52
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 203 1e-52
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 201 4e-52
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 200 6e-52
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 200 8e-52
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 198 3e-51
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 198 3e-51
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 198 3e-51
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 185 3e-47
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 182 3e-46
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 173 8e-44
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 119 2e-27
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 100 9e-22
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 89 2e-18
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 72 5e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 62 4e-10
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 58 5e-09
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 51 1e-06
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 34 0.12
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 34 0.12
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 34 0.12
At1g16690.2 68414.m01999 transcription factor-related similar to... 33 0.21
At1g16690.1 68414.m01998 transcription factor-related similar to... 33 0.21
At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit (... 30 2.0
At4g17410.1 68417.m02607 expressed protein 30 2.0
At5g26070.1 68418.m03102 hydroxyproline-rich glycoprotein family... 29 3.4
At5g29020.1 68418.m03592 hypothetical protein 28 7.9
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 28 7.9
At1g76110.1 68414.m08838 high mobility group (HMG1/2) family pro... 28 7.9
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 203 bits (495), Expect = 1e-52
Identities = 104/165 (63%), Positives = 110/165 (66%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETFN PAMYVAIQAVLSLYASGRTT P + P
Sbjct: 127 ETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEMAT 750
EREIVRDIKEKLCY+ALD++QE+ T
Sbjct: 187 LTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELET 231
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 112 bits (270), Expect = 2e-25
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTT
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTT 205
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 203 bits (495), Expect = 1e-52
Identities = 105/165 (63%), Positives = 111/165 (67%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETFNTPAMYVAIQAVLSLYASGRTT P + P
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEMAT 750
EREIVRD+KEKL Y+ALD++QEM T
Sbjct: 187 LTDYLMKILTERGYSFTTSAEREIVRDVKEKLAYIALDYEQEMET 231
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 114 bits (275), Expect = 5e-26
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTT+
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTS 205
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 203 bits (495), Expect = 1e-52
Identities = 104/165 (63%), Positives = 110/165 (66%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETFN PAMYVAIQAVLSLYASGRTT P + P
Sbjct: 127 ETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEMAT 750
EREIVRDIKEKLCY+ALD++QE+ T
Sbjct: 187 LTDALMKILTERGYSFTTTAEREIVRDIKEKLCYIALDYEQELET 231
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 112 bits (270), Expect = 2e-25
Identities = 53/54 (98%), Positives = 53/54 (98%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGYSFTTT
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTT 205
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 201 bits (491), Expect = 4e-52
Identities = 105/165 (63%), Positives = 110/165 (66%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETFNTPAMYVAIQAVLSLYASGRTT P + P
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEMAT 750
EREIVRD+KEKL Y+ALDF+QE+ T
Sbjct: 187 LTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDFEQELET 231
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 114 bits (274), Expect = 7e-26
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTT
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTT 205
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 200 bits (489), Expect = 6e-52
Identities = 105/165 (63%), Positives = 110/165 (66%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETFN PAMYVAIQAVLSLYASGRTT P + P
Sbjct: 127 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEMAT 750
EREIVRDIKEKL YVALD++QE+ T
Sbjct: 187 LTDSLMKILTERGYMFTTTAEREIVRDIKEKLAYVALDYEQELET 231
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 110 bits (265), Expect = 9e-25
Identities = 52/54 (96%), Positives = 52/54 (96%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTT
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDSLMKILTERGYMFTTT 205
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 200 bits (488), Expect = 8e-52
Identities = 104/165 (63%), Positives = 110/165 (66%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETFNTPAMYVAIQAVLSLYASGRTT P + P
Sbjct: 127 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 186
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEMAT 750
EREIVRD+KEKL Y+ALD++QE+ T
Sbjct: 187 LTDHLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELET 231
Score = 115 bits (276), Expect = 4e-26
Identities = 52/61 (85%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKR
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
Score = 114 bits (274), Expect = 7e-26
Identities = 53/54 (98%), Positives = 54/54 (100%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD+LMKILTERGYSFTTT
Sbjct: 152 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDHLMKILTERGYSFTTT 205
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 198 bits (484), Expect = 3e-51
Identities = 102/165 (61%), Positives = 111/165 (67%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETFN+PAMYVAIQAVLSLYASGRTT P + P
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 186
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEMAT 750
EREIVRDIKEKL +VA+D++QEM T
Sbjct: 187 LTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMET 231
Score = 111 bits (267), Expect = 5e-25
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTT
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTT 205
Score = 110 bits (265), Expect = 9e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 198 bits (484), Expect = 3e-51
Identities = 102/165 (61%), Positives = 111/165 (67%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETFN+PAMYVAIQAVLSLYASGRTT P + P
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 186
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEMAT 750
EREIVRDIKEKL +VA+D++QEM T
Sbjct: 187 LTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMET 231
Score = 111 bits (267), Expect = 5e-25
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTT
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTT 205
Score = 110 bits (265), Expect = 9e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 198 bits (484), Expect = 3e-51
Identities = 102/165 (61%), Positives = 111/165 (67%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMF
Sbjct: 67 LTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMF 126
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETFN+PAMYVAIQAVLSLYASGRTT P + P
Sbjct: 127 ETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRD 186
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEMAT 750
EREIVRDIKEKL +VA+D++QEM T
Sbjct: 187 LTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFVAVDYEQEMET 231
Score = 111 bits (267), Expect = 5e-25
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTDYLMKILTERGY FTTT
Sbjct: 152 GIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTT 205
Score = 110 bits (265), Expect = 9e-25
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKD+YVGDEAQSKR
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKR 64
Query: 251 G 253
G
Sbjct: 65 G 65
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 185 bits (450), Expect = 3e-47
Identities = 92/163 (56%), Positives = 106/163 (65%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
L+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAPLNPK NREKMTQIMF
Sbjct: 68 LSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAPLNPKVNREKMTQIMF 127
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
E+F P+MY+ IQAVLSLY+SGRTT P + P
Sbjct: 128 ESFAFPSMYIGIQAVLSLYSSGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 187
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEM 744
EREIVRDIKEKLCY+A+D++QEM
Sbjct: 188 LTEYLTKIMMERGYTYTTSAEREIVRDIKEKLCYIAVDYEQEM 230
Score = 107 bits (256), Expect = 1e-23
Identities = 46/61 (75%), Positives = 56/61 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM +KD++VGDEAQ++R
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDEAQARR 65
Query: 251 G 253
G
Sbjct: 66 G 66
Score = 105 bits (251), Expect = 4e-23
Identities = 47/54 (87%), Positives = 52/54 (96%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+YL KI+ ERGY++TT+
Sbjct: 153 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYLTKIMMERGYTYTTS 206
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 182 bits (442), Expect = 3e-46
Identities = 103/186 (55%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
Frame = +1
Query: 190 RDGRYGTEGLLCRR*GTEQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 369
RDG E + G + LTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDGLNPNESYVGEE-GHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 370 VLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTT-VSCWTPATVSPT 546
VLLTEAP NPKANREKMTQIMFE+F+ PAMYV++Q+VL LY+SGRTT V VS T
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYVSMQSVLYLYSSGRTTGVVLDLGERVSHT 153
Query: 547 PCPSTKDTHSPTPSCVWT*PVXXXXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVAL 726
P + P EREIVRDIKEKLCYVAL
Sbjct: 154 -VPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTSAEREIVRDIKEKLCYVAL 212
Query: 727 DFQQEM 744
D++QEM
Sbjct: 213 DYEQEM 218
Score = 97.1 bits (231), Expect = 1e-20
Identities = 41/54 (75%), Positives = 50/54 (92%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
G+VLD G+ VSHTVP+YEGYALPH ILRLDL GRDLTDYL++I+TERGY++TT+
Sbjct: 141 GVVLDLGERVSHTVPVYEGYALPHGILRLDLGGRDLTDYLIEIMTERGYTYTTS 194
Score = 61.7 bits (143), Expect = 5e-10
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+V D G GM +AGFAGD+AP+ VFP +VGRPR G+ +SYVG+E + R
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPRD-----GLNPNESYVGEEGHANR 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 173 bits (422), Expect = 8e-44
Identities = 89/163 (54%), Positives = 108/163 (66%)
Frame = +1
Query: 256 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMF 435
LTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPLNPKA+REKMTQIMF
Sbjct: 22 LTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPLNPKADREKMTQIMF 81
Query: 436 ETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVWT*PVXX 615
ETF P+MY+ +QA LSL+ASGRTT + P + S P + +
Sbjct: 82 ETFAVPSMYIGMQAALSLHASGRTTGTVLDSGDGVSYIVPIYEG--SALPHAILRLDL-A 138
Query: 616 XXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEM 744
ERE+VRDIKE+ Y+ALD++QEM
Sbjct: 139 GRHLTNYLMKIMMERGYTSAEREVVRDIKEQFGYIALDYEQEM 181
Score = 88.2 bits (209), Expect = 5e-18
Identities = 41/50 (82%), Positives = 45/50 (90%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 659
G VLDSGDGVS+ VPIYEG ALPHAILRLDLAGR LT+YLMKI+ ERGY+
Sbjct: 107 GTVLDSGDGVSYIVPIYEGSALPHAILRLDLAGRHLTNYLMKIMMERGYT 156
Score = 28.7 bits (61), Expect = 4.5
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 194 MVGMGQKDSYVGDEAQSKRG 253
MVGM + D +VGD+A+++ G
Sbjct: 1 MVGMNENDLFVGDDAEARSG 20
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 119 bits (287), Expect = 2e-27
Identities = 61/168 (36%), Positives = 86/168 (51%)
Frame = +1
Query: 238 TEQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 417
+E + L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ PLNP NREK
Sbjct: 60 SELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNREK 119
Query: 418 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHSPTPSCVW 597
M + MFE +N +++ IQAVL+LYA G T P P +
Sbjct: 120 MIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRM 179
Query: 598 T*PVXXXXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQE 741
+ E VR+IKEKLCY++ D+++E
Sbjct: 180 NVAGRHITAYLVDLLSRRGYAMNKTADFETVREIKEKLCYISYDYKRE 227
Score = 70.1 bits (164), Expect = 1e-12
Identities = 27/54 (50%), Positives = 41/54 (75%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTT 671
G+V+DSGDGV+H VP+ +GY+ PH R+++AGR +T YL+ +L+ RGY+ T
Sbjct: 151 GLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVAGRHITAYLVDLLSRRGYAMNKT 204
Score = 50.0 bits (114), Expect = 2e-06
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKR 250
+V DNG+G K GFAG++ P +VFP +VGRP R++ ++ KD VG+ R
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVKDIVVGETCSELR 63
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 100 bits (240), Expect = 9e-22
Identities = 45/86 (52%), Positives = 59/86 (68%)
Frame = +1
Query: 262 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 441
L YPIEHG V +WD ME+ W +N LR PE+H LLTE+PL P +RE +I+FET
Sbjct: 86 LHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTESPLTPPESREYTGEILFET 145
Query: 442 FNTPAMYVAIQAVLSLYASGRTTVSC 519
FN P +Y+A+ +VL+L A+G TT C
Sbjct: 146 FNVPGLYIAVNSVLAL-AAGYTTSKC 170
Score = 53.6 bits (123), Expect = 1e-07
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 653
G+V+D GDG +H VP+ EGY + I + +AG+D+T ++ +++ ERG
Sbjct: 174 GVVVDVGDGATHVVPVAEGYVIGSCIKSIPIAGKDVTLFIQQLMRERG 221
Score = 35.9 bits (79), Expect = 0.030
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +2
Query: 83 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 169
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 89.4 bits (212), Expect = 2e-18
Identities = 42/104 (40%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Frame = +1
Query: 244 QKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 423
++ ++ + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN + REK
Sbjct: 85 RRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLNTQQQREKAA 144
Query: 424 QIMFETFNTPAMYVAIQAVLSLYASGRTT---VSC-WTPATVSP 543
++MFE + PA+++A VL+ +A+GR T V C T+SP
Sbjct: 145 ELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISP 188
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 172
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/47 (38%), Positives = 28/47 (59%)
Frame = +3
Query: 513 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERG 653
+V+D G G + P+++GY L A++ L G LTD L+K L +G
Sbjct: 175 LVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKG 221
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 71.7 bits (168), Expect = 5e-13
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +1
Query: 271 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFN 447
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 448 TPAMYVAIQAVLSLYASGR 504
Y + QAVLSLYA GR
Sbjct: 117 VSGFYASEQAVLSLYAVGR 135
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 62.1 bits (144), Expect = 4e-10
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +1
Query: 271 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 417
P + GIVT+WD ++ +W H F N L + P EHP+LL E PLN + REK
Sbjct: 88 PTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +2
Query: 71 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 250
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG G+ + + E+ ++
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEK 64
Query: 251 G 253
G
Sbjct: 65 G 65
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 58.4 bits (135), Expect = 5e-09
Identities = 43/169 (25%), Positives = 74/169 (43%), Gaps = 8/169 (4%)
Frame = +1
Query: 262 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 441
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + +++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 442 FNTPAMYVAI-QAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHS-------PTPSCVW 597
F ++Y+A Q+++ LY + R S + S TH+ +
Sbjct: 121 FGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFTLNHAIK 180
Query: 598 T*PVXXXXXXXXXXXXXXXXXXXXXXEREIVRDIKEKLCYVALDFQQEM 744
+ E +V D KEKLC+V+LD +++
Sbjct: 181 RIDLGGKAFTNYLKELVSYRSINVMDETFLVDDAKEKLCFVSLDLLRDL 229
Score = 49.6 bits (113), Expect = 2e-06
Identities = 23/74 (31%), Positives = 41/74 (55%)
Frame = +3
Query: 429 HVRNIQHARHVRRHPSRALAVRVRSYHGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 608
H +++ H R P L+ ++ +V+D G +H VP+ + L HAI R+DL G
Sbjct: 130 HPQSLVHLYEASRQPDSILS---KTQCSLVVDCGFSFTHAVPVLHNFTLNHAIKRIDLGG 186
Query: 609 RDLTDYLMKILTER 650
+ T+YL ++++ R
Sbjct: 187 KAFTNYLKELVSYR 200
Score = 32.7 bits (71), Expect = 0.28
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 178
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 50.8 bits (116), Expect = 1e-06
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Frame = +1
Query: 271 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN 447
P + +V ++ ME I + F + +HP+L+TE NP +R KM +++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 448 TPAMYVAIQAVLSLYASGRTTVSCWTPATVSPTPCPSTKDTHS 576
PA+ + A S Y + C V CP THS
Sbjct: 145 VPAVAFGVDAAFS-YKYNQLHGICKKDGIVL---CPGFTTTHS 183
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = +2
Query: 86 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGD 232
+V+DNG+ + G+AG+ PR VF +IV RPRH+ G+ + VGD
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHKAT----GETVTIVGD 66
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +3
Query: 510 GIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTR 674
GIVL G +H++P +G + R ++ G +TDYL ++L+ + Y F ++R
Sbjct: 171 GIVLCPGFTTTHSIPFVDGEPIYKGSSRTNIGGYHVTDYLKQLLSLK-YPFHSSR 224
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 688 VRDIKEKLCYVALDFQQEMA 747
VR +KEKLCYVALD++ E++
Sbjct: 309 VRTLKEKLCYVALDYKAELS 328
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Frame = +1
Query: 328 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 477
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 478 VLSLYASGRTT 510
VL+LYA+ RT+
Sbjct: 241 VLALYAARRTS 251
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 688 VRDIKEKLCYVALDFQQEMA 747
VR +KEKLCYVALD++ E++
Sbjct: 309 VRTLKEKLCYVALDYKAELS 328
Score = 32.7 bits (71), Expect = 0.28
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Frame = +1
Query: 328 TFYNELRVAPEEHPVLLTEAPL-------NPKANREKMTQIMFETF---NTPAMYVAIQA 477
T + ++V P P++++ PL + KA+R ++ +F N PA+ QA
Sbjct: 182 TIFTRMQVKPSMQPIVVS-LPLCHFDDTESAKASRRQLKTAIFNVLFDMNVPAVCAVNQA 240
Query: 478 VLSLYASGRTT 510
VL+LYA+ RT+
Sbjct: 241 VLALYAARRTS 251
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = -3
Query: 207 PIPTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 70
P P I P RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 290 PTPDIKP-TRGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 241 EQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 417
E +YL++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/59 (33%), Positives = 28/59 (47%)
Frame = +1
Query: 241 EQKRYLTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 417
E +YL++KY + H I + W + +IW L+ P PV T P N REK
Sbjct: 173 EALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRPREK 227
>At5g17420.1 68418.m02044 cellulose synthase, catalytic subunit
(IRX3) identical to gi:5230423
Length = 1026
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +3
Query: 384 GSPQPQGQQREDDPDHVR---NIQHARHVRRHPSRALAVRVRSY 506
GSP+ +G + E+D D + NI+H + +H + A+ SY
Sbjct: 91 GSPRVEGDEDEEDIDDIEYEFNIEHEQDKHKHSAEAMLYGKMSY 134
>At4g17410.1 68417.m02607 expressed protein
Length = 744
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/65 (35%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = +2
Query: 461 TSPSKPCSRC--TRPVVPRYRAGLRR-RCLPHRAHLRRIRTPPRHPASGLSRSRPHRLPH 631
+SP KP SR P+ Y R R P R RR +PPR + R R H L
Sbjct: 551 SSPVKPKSRQGPPPPISSDYDRRRRSDRSSPERQSSRRFTSPPRSSSRKSERDRHHDLDS 610
Query: 632 EDPHR 646
E R
Sbjct: 611 EHDRR 615
>At5g26070.1 68418.m03102 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965; similar to root nodule extensin
[Pisum sativum] gi|15021750|gb|AAK77902; Common family
members: At5g19800, At5g57070, At1g72790 [Arabidopsis
thaliana]
Length = 102
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 542 PHRAHLRRIRTPPRHPASGLSRSRPHRLP--HEDPHRARLLVHYH--PPSGK 685
P+R+ + + PP HPA + P LP H PH R PPSGK
Sbjct: 46 PYRSPVT-LPPPPPHPAYSRPVALPPTLPIPHPSPHAERFYYRQSPPPPSGK 96
>At5g29020.1 68418.m03592 hypothetical protein
Length = 847
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 461 TSPSKPCSRCTRPVVPRY-RAGLRRRCLPHRAHLRRIRTPPRHPASGL 601
++P+KPC T PV P Y G R+R P + R + P P+ L
Sbjct: 26 SNPAKPCGSRTLPVNPPYPTTGKRKRADPPKPS-RGLSPNPTDPSGVL 72
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +2
Query: 452 PPCTSPSKPCSRCTRPVVPRYRAGLRRRCLPHRAH 556
PP SP + P PRYRAGL R P H
Sbjct: 107 PPHHSPLTLFPTLSPPSSPRYRAGLIRSLSPKSKH 141
>At1g76110.1 68414.m08838 high mobility group (HMG1/2) family
protein / ARID/BRIGHT DNA-binding domain-containing
protein low similarity to high mobility group protein
[Plasmodium falciparum] GI:790198; contains Pfam
profiles PF00505: HMG (high mobility group) box,
PF01388: ARID/BRIGHT DNA binding domain
Length = 338
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 440 HSTRP-PCTSPSKPCSRCTRPVVPRYRAGLRRRCLPHRAHLRRIRTPPRHP 589
HS +P P +SP+ + VVP G RRR L R RR R P +P
Sbjct: 209 HSAQPGPSSSPTAVLNNA---VVPYVETGRRRRRLGKRRRSRR-REDPNYP 255
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,648,852
Number of Sequences: 28952
Number of extensions: 451540
Number of successful extensions: 1657
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1426
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1646
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1721869952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -