Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1448
(754 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15) 37 0.020
SB_21135| Best HMM Match : Peroxin-13_N (HMM E-Value=0) 36 0.027
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 36 0.035
SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31) 35 0.082
SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.19
SB_15138| Best HMM Match : CLN3 (HMM E-Value=4.4e-05) 33 0.25
SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_44033| Best HMM Match : SRCR (HMM E-Value=1.3) 32 0.43
SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 32 0.43
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 32 0.57
SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4) 32 0.57
SB_14709| Best HMM Match : Cornifin (HMM E-Value=0.0088) 32 0.57
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 31 1.0
SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74) 31 1.0
SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0) 31 1.3
SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 30 1.8
SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_33377| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091) 30 1.8
SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_11629| Best HMM Match : AT_hook (HMM E-Value=0.78) 30 2.3
SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35) 29 3.1
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_59542| Best HMM Match : Pyrophosphatase (HMM E-Value=1.9) 29 4.1
SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16) 29 4.1
SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1
SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_14859| Best HMM Match : SEA (HMM E-Value=0.01) 29 5.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08) 29 5.4
SB_59448| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94) 28 7.1
SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0) 28 7.1
SB_34906| Best HMM Match : Cadherin (HMM E-Value=0) 28 7.1
SB_31795| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_54616| Best HMM Match : zf-AD (HMM E-Value=0.038) 28 7.1
SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38) 28 7.1
SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.1
SB_24975| Best HMM Match : ET (HMM E-Value=1) 28 7.1
SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18) 28 9.4
SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8) 28 9.4
SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19) 28 9.4
SB_64| Best HMM Match : Rho_N (HMM E-Value=1.8e-07) 28 9.4
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 38.7 bits (86), Expect = 0.005
Identities = 39/151 (25%), Positives = 54/151 (35%), Gaps = 2/151 (1%)
Frame = +3
Query: 288 SPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNP--TRSSNTCHIT*RSTLRFP 461
SP PSP+ + PS++P + PS P PNP S +T I+ P
Sbjct: 488 SPNPSPNPSSDPSPNPSSNPSSDPSPNPSSNPSSEPSPNPISNPSISTSPISNPHPSSNP 547
Query: 462 STFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREARSLPRQGSSAPTLPRGETRAI 641
S P S P+ + P+L + S +P L R
Sbjct: 548 SPHPSSNPSSEPSPNPSSNPSSDPSPNPSSDPSLSFSPSSSSSPSVRPSPNLISNPNRNS 607
Query: 642 PRRKLKCPYRSPTPL*NTSVSPSRCPSTGPY 734
+ P S P + S +PS PST PY
Sbjct: 608 NSNSNRNPNPSSNPSPSLSPNPSPNPSTSPY 638
>SB_22238| Best HMM Match : CMAS (HMM E-Value=3.5e-15)
Length = 1605
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/31 (58%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -2
Query: 618 VRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
V LGH +D G+GN +LDWVGLGH +D V
Sbjct: 875 VGLGHSVVDWVGLGNSVLDWVGLGHSVVDWV 905
Score = 36.3 bits (80), Expect = 0.027
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = -1
Query: 511 VGIRHLLFDWVWRGNVDGNLNVLLHV-IWHVFDDLVGLGHGYLD--GIRHVLLNWVWNGS 341
VG+ H + DWV GN +V+ V + H D VGLGH +D G+ H +++WV G
Sbjct: 715 VGLDHSVVDWVGLGN-----SVVEWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWVGLGH 769
Query: 340 --VDGVRYRDAFDEGDGLG 290
VD V + + GLG
Sbjct: 770 SVVDWVGLGHSVVDWVGLG 788
Score = 36.3 bits (80), Expect = 0.027
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+GN ++DWVGLGH +D V
Sbjct: 849 HSVVDYVGLGHSVVDYVGLGNSVVDWVGLGHSVVDWV 885
Score = 35.9 bits (79), Expect = 0.035
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+G++++DWVGLGH +D V
Sbjct: 809 HSVVDWVGLGHSVVDWVGLGHLVVDWVGLGHSVVDWV 845
Score = 35.1 bits (77), Expect = 0.062
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+GN +++WVGLGH +D V
Sbjct: 649 HSVVDWVGLGHSVVDWVGLGNSVVEWVGLGHSIVDWV 685
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+G+ ++DWVGLGH +D V
Sbjct: 739 HSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWV 775
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+G+ ++DWVGLGH +D V
Sbjct: 749 HSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWV 785
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+G+ ++DWVGLGH +D V
Sbjct: 759 HSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWV 795
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+G+ ++DWVGLGH +D V
Sbjct: 769 HSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWV 805
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+G+ ++DWVGLGH +D V
Sbjct: 779 HSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWV 815
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+G+ ++DWVGLGH +D V
Sbjct: 789 HSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWV 825
Score = 34.7 bits (76), Expect = 0.082
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH +D G+G+ ++DWVGLGH +D V
Sbjct: 819 HSVVDWVGLGHLVVDWVGLGHSVVDWVGLGHSVVDYV 855
Score = 34.3 bits (75), Expect = 0.11
Identities = 30/84 (35%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Frame = -1
Query: 511 VGIRHLLFDWVWRGNVDGNLNVLLHVI--W----HVFDDLVGLGHGYLD--GIRHVLLNW 356
VG+ H + DWV GN L H I W + D VGLGH +D G+ H ++ W
Sbjct: 655 VGLGHSVVDWVGLGNSVVEWVGLGHSIVDWVELGNSVVDCVGLGHSVVDWVGLGHSVVGW 714
Query: 355 VW--NGSVDGVRYRDAFDEGDGLG 290
V + VD V ++ E GLG
Sbjct: 715 VGLDHSVVDWVGLGNSVVEWVGLG 738
Score = 34.3 bits (75), Expect = 0.11
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Frame = -1
Query: 511 VGIRHLLFDWVWRGNVDGNLNVLLHVI--W----HVFDDLVGLGHGYLD--GIRHVLLNW 356
VG+ H + DWV G+ + L H + W H D VGLGH +D G+ H +++W
Sbjct: 745 VGLGHSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDWVGLGHSVVDW 804
Query: 355 VWNGS--VDGVRYRDAFDEGDGLG 290
V G VD V + + GLG
Sbjct: 805 VGLGHSVVDWVGLGHSVVDWVGLG 828
Score = 34.3 bits (75), Expect = 0.11
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Frame = -1
Query: 511 VGIRHLLFDWVWRGNVDGNLNVLLHV-IWHVFDDLVGLGHGYLD--GIRHVLLNWVWNGS 341
VG+ HL+ DWV G+ +V+ V + H D VGLGH +D G+ + +++WV G
Sbjct: 825 VGLGHLVVDWVGLGH-----SVVDWVGLGHSVVDYVGLGHSVVDYVGLGNSVVDWVGLGH 879
Query: 340 --VDGVRYRDAFDEGDGLG 290
VD V ++ + GLG
Sbjct: 880 SVVDWVGLGNSVLDWVGLG 898
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LGH D G+G+ ++DWVGLGH +D V
Sbjct: 629 HSVVDWVGLGHSVADWVGLGHSVVDWVGLGHSVVDWV 665
Score = 33.5 bits (73), Expect = 0.19
Identities = 16/31 (51%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -2
Query: 618 VRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
V LGH +D G+G+ ++DWVGLGH +D V
Sbjct: 735 VGLGHSVVDWVGLGHSVVDWVGLGHSVVDWV 765
Score = 32.7 bits (71), Expect = 0.33
Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V LG+ LD G+G+ ++DWVGLGH +D V
Sbjct: 879 HSVVDWVGLGNSVLDWVGLGHSVVDWVGLGHSVVDYV 915
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/37 (43%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H + V L H +D G+GN +++WVGLGH +D V
Sbjct: 709 HSVVGWVGLDHSVVDWVGLGNSVVEWVGLGHSVVDWV 745
Score = 31.9 bits (69), Expect = 0.57
Identities = 16/37 (43%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
H+ + V LGH +D G+G+ ++D+VGLGH +D V
Sbjct: 829 HLVVDWVGLGHSVVDWVGLGHSVVDYVGLGHSVVDYV 865
Score = 30.7 bits (66), Expect = 1.3
Identities = 14/31 (45%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = -2
Query: 636 HVFLHGVRLGHWNLD--GVGNVLLDWVGLGH 550
H + V LG+ +D G+G+ ++DWVGLGH
Sbjct: 679 HSIVDWVELGNSVVDCVGLGHSVVDWVGLGH 709
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = -1
Query: 427 HVFDDLVGLGHGYLD--GIRHVLLNWVWNGS 341
H D VGLGH +D G+ H +++WV G+
Sbjct: 639 HSVADWVGLGHSVVDWVGLGHSVVDWVGLGN 669
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 618 VRLGHWNLDGV--GNVLLDWVGLGHEHLDGV 532
V LGH +D V GN ++D VGLGH +D V
Sbjct: 675 VGLGHSIVDWVELGNSVVDCVGLGHSVVDWV 705
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 2/31 (6%)
Frame = -2
Query: 618 VRLGHWNLD--GVGNVLLDWVGLGHEHLDGV 532
V LGH +D G+G+ ++ WVGL H +D V
Sbjct: 695 VGLGHSVVDWVGLGHSVVGWVGLDHSVVDWV 725
>SB_21135| Best HMM Match : Peroxin-13_N (HMM E-Value=0)
Length = 383
Score = 36.3 bits (80), Expect = 0.027
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Frame = +3
Query: 114 PLEKKLDKRGLLNLGYGYGIDGLDVGYIGHGQGLGG--AYNYVDGGYSSATASTSV 275
P+ + + G+ ++G GYG+ GY G+G G GG +Y ++ GY ST V
Sbjct: 60 PIPSRPQRAGMSSMGSGYGMS--SYGYGGYGGGYGGHPSYGMMNRGYGQEGTSTFV 113
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 35.9 bits (79), Expect = 0.035
Identities = 48/166 (28%), Positives = 66/166 (39%), Gaps = 4/166 (2%)
Frame = +3
Query: 252 SATASTSV-DIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPN-PTRSSNT 425
S+ A SV IP+ RPS + S LTPST +RST + SR PT S+
Sbjct: 1694 SSIAKNSVHSIPSPSRPSLNIAPSSTLTPSTAGHTIDIRSTNRVHSRAQEGQIPTLSTLK 1753
Query: 426 CHIT*RSTLRF-PSTFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREARSLPRQGS 602
T ST ++ P T + P T+ PR P + PR +
Sbjct: 1754 TTSTSTSTTKYIPPPHSPPTTTTTTTTTPETTA----PRTTTPETTTPE---TTTPRTTT 1806
Query: 603 SAPTLPRGET-RAIPRRKLKCPYRSPTPL*NTSVSPSRCPSTGPYP 737
T PR T + +K ++P P+ T + S PST P
Sbjct: 1807 PETTKPRTTTPKTTTPKKTTAAKKAPLPV--THATTSHAPSTTENP 1850
>SB_54456| Best HMM Match : EGF (HMM E-Value=2.3e-31)
Length = 491
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 260 GLNFGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
G+ F V + V VP P V+RPV + + +P+PV V +P VPY V
Sbjct: 247 GMPFSNMMAVDAPVHHVDRVPFPVMVNRPVHH--TERIPFPVPFVVNRPIHHTVQVPYPV 304
Score = 33.5 bits (73), Expect = 0.19
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 320 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPV 463
PVP+ V+RP+ + V+ VPYPV V P ++ V VPV
Sbjct: 285 PVPFVVNRPIHHTVQ--VPYPVPVRGPSRLVIINRPVPMPSRPVPVPV 330
>SB_42042| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 863
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/39 (48%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = +2
Query: 518 QLTGLTPSRCSCPSPTQSRSTFP--TPSRFQCPNLTPWR 628
++T TPSR + P PT SR P TPSR+ P TP R
Sbjct: 501 KVTESTPSRYNTPLPTPSRYNTPWSTPSRYNTPWSTPSR 539
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Frame = +2
Query: 515 YQLTGLTPSRCSCPSPTQSR--STFPTPSRFQCPNLTPWRNT 634
Y TPSR + P T SR + +PTPSR+ P TP R T
Sbjct: 640 YNTPWSTPSRYNTPWSTPSRYNTPWPTPSRYNTPWSTPSRVT 681
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 33.5 bits (73), Expect = 0.19
Identities = 38/144 (26%), Positives = 57/144 (39%), Gaps = 5/144 (3%)
Frame = +3
Query: 243 GYSSATASTSVDIPTSPRPSPSSKASLYLTPS--TDPFHTQLRSTCLIPSR*PCPNPTRS 416
G T S PTS + SP+S +S TP+ TD ST S NPT S
Sbjct: 98 GPDVGTQQPSPASPTSIKQSPNSSSSTGQTPTEKTDSTPKSSGSTLPTSSTPATQNPTDS 157
Query: 417 SNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSR--EARSLP 590
S + + T S ++ PT + + +P +R E ++P
Sbjct: 158 SLSTKPPTKKTGETQSPTENSISTEESATTPTPSGSTSPTSPNNASPQSSTRPGETTAIP 217
Query: 591 RQGSSAPTLPRGETR-AIPRRKLK 659
+Q + PT P G T+ P+ + K
Sbjct: 218 KQ--TGPTQPPGSTKITTPQHETK 239
>SB_12670| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1272
Score = 33.5 bits (73), Expect = 0.19
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)
Frame = +3
Query: 534 PRQGARAPALPSREARSLPRQGSSAPTLPRGETRAIPRRKLKCPYRSPTPL*NTSVSP-- 707
PR+ R PSR R P + + + PRR+ + P SP P+ ++ + P
Sbjct: 895 PRRRRRDSYSPSRRRRDSPTPSPPPRRRRKSPSPSPPRRRRRSPSNSPPPMRSSPLPPPQ 954
Query: 708 SRCPSTGPYPR 740
+ ST P PR
Sbjct: 955 RKRASTPPSPR 965
Score = 31.5 bits (68), Expect = 0.76
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +3
Query: 489 KRRCLIPTRTS*QALPRQGARAPA-LPSREARSLPRQGSSAPTLPRGETRAIPRRKLKCP 665
+RR P RTS + R+PA + S ARS R S++P + ++ A+ + ++K
Sbjct: 657 ERRRSPPRRTSRWSSQSPDRRSPARIKSSPARSRSRSQSASPRHSKSKSPALSKVQVKTE 716
Query: 666 YRSPTP 683
++P+P
Sbjct: 717 KKTPSP 722
>SB_15138| Best HMM Match : CLN3 (HMM E-Value=4.4e-05)
Length = 662
Score = 33.1 bits (72), Expect = 0.25
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +2
Query: 290 TKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
++ ITL + +PY V R +PY V + +PY V + PY V + +P+ V
Sbjct: 356 SRVITLCRTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYTVTRVLPFIV 403
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT+ + + +PY V R +PY V + +PY V + PY V + +PY V
Sbjct: 459 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYTVTRVLPYIV 507
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT+ + + +PY V R +PY V + +PY V + PY V + +PY V
Sbjct: 467 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYTVTRVL--PYIVTRVLPYIV 515
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT+ + + +PY V R +PY V + +PY V + PY V + +PY V
Sbjct: 395 VTRVLPFIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 443
Score = 31.9 bits (69), Expect = 0.57
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT+ + + +PY V R +PY V + +PY V + PY V + +PY V
Sbjct: 411 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 459
Score = 31.9 bits (69), Expect = 0.57
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT+ + + +PY V R +PY V + +PY V + PY V + +PY V
Sbjct: 427 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 475
Score = 31.9 bits (69), Expect = 0.57
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT+ + + +PY V R +PY V + +PY V + PY V + +PY V
Sbjct: 443 VTRVLPYIVTRVLPYIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 491
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT + + +PY V R +PY V + +PY V + PY V + +PY V
Sbjct: 548 VTMVLPYIVTWVLPYIVTRVLPYIVTRVLPYIVTRVL--PYTVTRVLPYIV 596
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/51 (33%), Positives = 28/51 (54%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT+ + + +PY V R +PY V + +P+ V + PY V + +PY V
Sbjct: 371 VTRVLPYIVTRVLPYIVTRVLPYTVTRVLPFIVTRVL--PYIVTRVLPYIV 419
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT + + + +PY V +PY V + +PY V + PY V + +PY V
Sbjct: 540 VTSVLPYIVTMVLPYIVTWVLPYIVTRVLPYIVTRVL--PYIVTRVLPYTV 588
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/51 (33%), Positives = 27/51 (52%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHV 439
VT+ + +P+ V R +PY V + +PY V + PY V + +PY V
Sbjct: 387 VTRVLPYTVTRVLPFIVTRVLPYIVTRVLPYIVTRVL--PYIVTRVLPYIV 435
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 287 VTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVP 400
VT+ + + +PY V R +PY V + +PY V +P
Sbjct: 564 VTRVLPYIVTRVLPYIVTRVLPYTVTRVLPYIVTRILP 601
>SB_39550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 158
Score = 32.7 bits (71), Expect = 0.33
Identities = 34/115 (29%), Positives = 45/115 (39%), Gaps = 2/115 (1%)
Frame = +3
Query: 405 PTRSSNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREA-- 578
PT + T T T P+T HT +K PT T+ P Q P PS A
Sbjct: 13 PTLTKATPQTTPTPTKPTPTT---HTPTKPSPTTPTSTA----PTQTTPTPTTPSPTAPT 65
Query: 579 RSLPRQGSSAPTLPRGETRAIPRRKLKCPYRSPTPL*NTSVSPSRCPSTGPYPRA 743
++ P + PT P +T L P + TP T +P+ T P P A
Sbjct: 66 QTTPTPATPTPTTPTPKTPTPTTSTLTKPTPATTPT-PTKPTPTAHTPTTPTPTA 119
Score = 29.5 bits (63), Expect = 3.1
Identities = 28/96 (29%), Positives = 38/96 (39%)
Frame = +3
Query: 282 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFP 461
PT P+P++ TP T T ST P+ P PT+ + T H T P
Sbjct: 64 PTQTTPTPATPTPTTPTPKTP---TPTTSTLTKPTPATTPTPTKPTPTAH---TPTTPTP 117
Query: 462 STFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPS 569
+ HT +K PT T+ P A P P+
Sbjct: 118 TA---HTPTKPTPKTPTPTT----PTPTAHTPTTPT 146
>SB_3455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 587
Score = 32.7 bits (71), Expect = 0.33
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 5/55 (9%)
Frame = +2
Query: 317 VPVPYAVDRPVPYPVE-KHVPYPVKVAVP---QPYEVVKHVPYHVKEY-VKVPVH 466
VP+P+ V PV +P +HVP+PV V P P V H P V+ +PVH
Sbjct: 412 VPIPFPV--PVNHPPRVEHVPFPVPVEGPPRIHPVIVPFHTPPRVEHVPFPIPVH 464
>SB_44033| Best HMM Match : SRCR (HMM E-Value=1.3)
Length = 112
Score = 32.3 bits (70), Expect = 0.43
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 320 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPY 433
P PY RP PY + P+P P PY + PY
Sbjct: 12 PFPYTTRRPFPYTTRR--PFPYTTRRPLPYTTRRPFPY 47
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +2
Query: 320 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPY 409
P PY RP+PY + P+P P PY
Sbjct: 28 PFPYTTRRPLPYTTRR--PFPYTTRPPFPY 55
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/46 (34%), Positives = 17/46 (36%)
Frame = +2
Query: 320 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKV 457
P PY RP PY P P P PY PY + V V
Sbjct: 20 PFPYTTRRPFPYTT--RRPLPYTTRRPFPYTTRPPFPYTTRPQVFV 63
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/38 (28%), Positives = 16/38 (42%)
Frame = +2
Query: 320 PVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPY 433
P P+ P+P P+P P PY + +PY
Sbjct: 2 PTPFRYTTRRPFPYTTRRPFPYTTRRPFPYTTRRPLPY 39
>SB_2841| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3297
Score = 32.3 bits (70), Expect = 0.43
Identities = 33/137 (24%), Positives = 51/137 (37%), Gaps = 3/137 (2%)
Frame = +3
Query: 243 GYSSATASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSN 422
G +SAT ST D + PS + + P T T + T P P T +
Sbjct: 2823 GTASATMSTFTDAADTTAPSKTGAPEITAAPET----TAVPETIETPETTSAPETTSAPE 2878
Query: 423 TCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS--*QALPRQGARAPALPSR-EARSLPR 593
T + + + +T P T P TS ++ +P S E +LP+
Sbjct: 2879 TTALPKTTAVPETTTPPETTAKPETTGAPETTSAPKTTAVQEATASPETTSEPETTALPK 2938
Query: 594 QGSSAPTLPRGETRAIP 644
++ T ET A+P
Sbjct: 2939 TTAAPETTSPTETTAVP 2955
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 32.3 bits (70), Expect = 0.43
Identities = 45/152 (29%), Positives = 59/152 (38%), Gaps = 3/152 (1%)
Frame = +3
Query: 291 PRPSPSSKASLYLTPSTDPFHTQLRSTCLIP--SR*PCPNPTRSSNTCHIT*RSTLRFPS 464
P P P+ K Y +P H Q LIP S P P+PT + T P
Sbjct: 133 PFPHPTYKHPSYPSP-----HIQASLLPLIPHTSIPPTPHPTYKHPSY-----PTYNIPP 182
Query: 465 TFPRHTQSKRRCLIPT-RTS*QALPRQGARAPALPSREARSLPRQGSSAPTLPRGETRAI 641
T HT + PT TS PR + P+ PS + S P A LP + +
Sbjct: 183 T--PHTS-----IPPTPHTSIPPTPRPTYKHPSYPSYKHPSYPSSHIQASLLPHIQASLL 235
Query: 642 PRRKLKCPYRSPTPL*NTSVSPSRCPSTGPYP 737
P + PTP +TS+ P+ P T P
Sbjct: 236 PL--IPNTSIPPTPTPHTSIPPTPTPHTSIPP 265
Score = 30.7 bits (66), Expect = 1.3
Identities = 41/153 (26%), Positives = 56/153 (36%), Gaps = 6/153 (3%)
Frame = +3
Query: 297 PSPSSKASLY-LTPSTD----PFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFP 461
PSP +ASL L P T P T + + P P+ T T H + T R
Sbjct: 145 PSPHIQASLLPLIPHTSIPPTPHPTYKHPSYPTYNIPPTPH-TSIPPTPHTSIPPTPRPT 203
Query: 462 STFPRHTQSKRRCLIPTRTS*QALPR-QGARAPALPSREARSLPRQGSSAPTLPRGETRA 638
P + K + LP Q + P +P+ P +S P P T +
Sbjct: 204 YKHPSYPSYKHPSYPSSHIQASLLPHIQASLLPLIPNTSIPPTPTPHTSIPPTPTPHT-S 262
Query: 639 IPRRKLKCPYRSPTPL*NTSVSPSRCPSTGPYP 737
IP PTP +TS+ P+ P T P
Sbjct: 263 IPPTPTPHTSIPPTPTPHTSIPPTPTPHTSIPP 295
Score = 29.5 bits (63), Expect = 3.1
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +2
Query: 323 VPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPY 433
+P+ P P+P KH YP P P+ + P+
Sbjct: 157 IPHTSIPPTPHPTYKHPSYPTYNIPPTPHTSIPPTPH 193
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 31.9 bits (69), Expect = 0.57
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 1/118 (0%)
Frame = +3
Query: 267 TSVDIP-TSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*R 443
T+V I TS P+ + +L L P T ++S L S P+P+ + T
Sbjct: 970 TTVSIEMTSIMPTETMNTTLSLLPDPSINVTYVKSPSLTTSGLLQPSPSANVTTELSKPV 1029
Query: 444 STLRFPSTFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREARSLPRQGSSAPTL 617
+T FP P S L+ +S P + A +PS SLP S T+
Sbjct: 1030 NTSFFPQPTPSTNMSSSEVLLSWNSSIMLTPSESANISKIPSSTV-SLPGNSSIMETV 1086
>SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11)
Length = 3810
Score = 31.9 bits (69), Expect = 0.57
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Frame = +2
Query: 551 CPSPTQSRSTFPTPSRFQCPN--LTPWRNTC 637
CP S+ P PS + CPN TP++N C
Sbjct: 1048 CPGANSEYSSRPCPSGYYCPNGTATPYQNPC 1078
>SB_2633| Best HMM Match : Drf_FH1 (HMM E-Value=4)
Length = 179
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 4/48 (8%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVP--YPVKVAVPQPYEVVKHVP--YHVKEYVKV 457
P V P +P++ H+P +P+KV +P + + H+P + +K +KV
Sbjct: 23 PIKVHLPNKHPIKVHLPNKHPIKVHLPNKHPIKVHLPNKHPIKHPIKV 70
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVP--YPVKVAVPQPYEVVKHVPYHVKEYVKVP 460
P V P +P++ H+P +P+KV +P + + H+P + V +P
Sbjct: 87 PIKVHLPNKHPIKVHLPNEHPIKVHLPNEHPIKVHLPNKLPIKVHLP 133
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +2
Query: 323 VPYAVDRPVPYPVEKHVP--YPVKVAVPQPYEVVKHVP 430
+P V P +P++ H+P +P+KV +P + + H+P
Sbjct: 126 LPIKVHLPNEHPIKVHLPNKHPIKVHLPNEHPIKVHLP 163
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVP--YPVKVAVPQPYEVVKHVP 430
P V P +P++ H+P +P+KV +P + + H+P
Sbjct: 13 PIKVHLPNEHPIKVHLPNKHPIKVHLPNKHPIKVHLP 49
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVP--YPVKVAVPQPYEVVKHVP 430
P V P +P++ H+P +P+KV +P + + H+P
Sbjct: 67 PIKVHLPNKHPIKVHLPNKHPIKVHLPNKHPIKVHLP 103
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVP--YPVKVAVPQPYEVVKHVP 430
P V P +P++ H+P +P+KV +P + + H+P
Sbjct: 77 PIKVHLPNKHPIKVHLPNKHPIKVHLPNEHPIKVHLP 113
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVP--YPVKVAVPQPYEVVKHVP 430
P V P +P++ H+P +P+KV +P + + H+P
Sbjct: 137 PIKVHLPNKHPIKVHLPNEHPIKVHLPNKHPIKVHLP 173
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVP--YPVKVAVPQPYEVVKHVP 430
P V P +P++ H+P P+KV +P + + H+P
Sbjct: 107 PIKVHLPNEHPIKVHLPNKLPIKVHLPNEHPIKVHLP 143
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVP--YPVKVAVPQPYEVVKHVP 430
P V P P++ H+P +P+KV +P + + H+P
Sbjct: 117 PIKVHLPNKLPIKVHLPNEHPIKVHLPNKHPIKVHLP 153
>SB_14709| Best HMM Match : Cornifin (HMM E-Value=0.0088)
Length = 301
Score = 31.9 bits (69), Expect = 0.57
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 351 HTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS 521
HT R+ C +R C TR++ CH R+ + HT ++ C TRT+
Sbjct: 165 HTDTRTACHTDTRTACHTDTRTA--CHTDIRTACHTDTRTACHTDTRTACHTDTRTA 219
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 351 HTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS 521
HT +R+ C +R C R++ CH R+ + HT ++ C TRT+
Sbjct: 133 HTDIRTACHTDTRTACHTDIRTA--CHTDIRTACHTDTRTACHTDTRTACHTDTRTA 187
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/57 (29%), Positives = 25/57 (43%)
Frame = +3
Query: 351 HTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS 521
HT R+ C +R C TR++ CH R+ HT ++ C TRT+
Sbjct: 77 HTDTRTACHTDTRTACHTNTRTA--CHTDIRTACHTDIRTACHTDTRTACHTDTRTA 131
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = +3
Query: 351 HTQLRSTCLIPSR*PCPNPTRSS------NTCHIT*RSTLRFPSTFPRHTQSKRRCLIPT 512
HT +R+ C +R C TR++ CH R+ + HT ++ C T
Sbjct: 37 HTDIRTACHTDTRTACHTDTRTACHTDTWTACHTDIRTACHTDTRTACHTDTRTACHTNT 96
Query: 513 RTS 521
RT+
Sbjct: 97 RTA 99
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/57 (29%), Positives = 24/57 (42%)
Frame = +3
Query: 351 HTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS 521
HT R+ C R C TR++ CH R+ HT ++ C TRT+
Sbjct: 125 HTDTRTACHTDIRTACHTDTRTA--CHTDIRTACHTDIRTACHTDTRTACHTDTRTA 179
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 31.1 bits (67), Expect = 1.0
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Frame = +2
Query: 278 HTDVTKTITLVKGVPVPYAVDRPVP--------YPVEKHVP----YPVKVAVPQPYEVVK 421
H + + + V +P P ++RPVP P+E+ VP P + + +P V
Sbjct: 477 HLPLERPVPAVTRLPTPLPLERPVPAVTHLPTDLPLERPVPAVTRLPTPLLLERPVPAVT 536
Query: 422 HVPYHVKEYVKVP 460
H+P H+ VP
Sbjct: 537 HLPAHLPLEWPVP 549
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 2/65 (3%)
Frame = +2
Query: 278 HTDVTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYH--VKEYV 451
H + + + V +P ++RPVP P P++ VP + H+P V
Sbjct: 381 HLPLERPVPAVTRLPTHLPLERPVPAVTRFTTPLPLERPVPAVTRLPTHLPLERPVPAVT 440
Query: 452 KVPVH 466
++P H
Sbjct: 441 RLPTH 445
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 269 FGGHTDVTKTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYH--VK 442
F + + + + V +P P ++RPVP P++ VP + H+P +
Sbjct: 602 FTTYLPLERPVPAVTRLPTPLPLERPVPAVTRLPTHLPLEQPVPAVTSLPTHLPLERPLP 661
Query: 443 EYVKVPVH 466
+ ++P H
Sbjct: 662 DVTRLPTH 669
Score = 28.7 bits (61), Expect = 5.4
Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Frame = +2
Query: 293 KTITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYH--VKEYVKVPVH 466
+ + V +P P ++RPVP P++ VP + H+P V ++P H
Sbjct: 514 RPVPAVTRLPTPLLLERPVPAVTHLPAHLPLEWPVPAVTRLPTHLPLERPVPAVTRLPTH 573
>SB_23620| Best HMM Match : Pentapeptide_2 (HMM E-Value=0.74)
Length = 483
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +2
Query: 368 HVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPVH 466
H P+PV+V V P+ V VP V+ V VP+H
Sbjct: 212 HHPFPVRVPVRVPFRVPVRVPVPVR--VPVPIH 242
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 320 PVPYAVDRPVPYPVEKHVPYPVKVAVP 400
P P V VP+ V VP PV+V VP
Sbjct: 214 PFPVRVPVRVPFRVPVRVPVPVRVPVP 240
>SB_7831| Best HMM Match : RNA_pol_Rpb1_7 (HMM E-Value=0)
Length = 1467
Score = 30.7 bits (66), Expect = 1.3
Identities = 51/169 (30%), Positives = 66/169 (39%), Gaps = 7/169 (4%)
Frame = +3
Query: 249 SSATASTSVDIPTSPRPSPSSKASLY--LTPSTDPFHTQLRSTCLIPSR*P-CPNPTRSS 419
S + AS S PTSP SPSS +S Y +PS P T PS P P+ + +S
Sbjct: 425 SMSPASPSYS-PTSPGYSPSSPSSGYSPASPSYSPTSPSYSPTS--PSYSPTSPSYSPTS 481
Query: 420 NTCHIT*RS-TLRFPSTFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREARS---L 587
+ T S + PS P + TS P + +P PS S
Sbjct: 482 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 541
Query: 588 PRQGSSAPTLPRGETRAIPRRKLKCPYRSPTPL*NTSVSPSRCPSTGPY 734
P S +PT P + P P SPT + SPS PS+ Y
Sbjct: 542 PTSPSYSPTSP-SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSY 589
>SB_59003| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 605
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = +3
Query: 534 PRQGARAPALPSR--EARSLPRQGSSAPTLPRGETRAIPRRK 653
PR + A P A + PR GSSA T PR ++ AI K
Sbjct: 243 PRSDSSAMTTPGSGSSAMATPRSGSSATTTPRSDSSAITTTK 284
Score = 27.9 bits (59), Expect = 9.4
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Frame = +3
Query: 363 RSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS*QALPRQ 542
+S+ L PS P P RS + R S+ S+RR L+ T A+PR
Sbjct: 401 QSSSLYPST-PLPTTPRSGSQAE-------RTTSSGSSDKLSRRRGLL---TLTLAVPRS 449
Query: 543 GA-RAPALPSREARSLPRQGSSAPTLPRGETRAIPRRKLKCPYRSPTPL*NTSVSPSRCP 719
+ R P R A+ PR GSSA PR + ++ R TP + S R P
Sbjct: 450 SSQRTP----RSAQRTPRSGSSAQRTPRSGS-SVQRTPRSGSLAQGTP--KSGSSAQRTP 502
Query: 720 STG 728
S+G
Sbjct: 503 SSG 505
>SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35)
Length = 1118
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -1
Query: 511 VGIRHLLFDWVWRGNVDGNLNVLLHVIWHVFDDLVG--LGHGYLDGIRHVLLNW 356
V I + + DW W + G ++L V W + + + HG L+ R VL+ +
Sbjct: 791 VVIAYFIRDWRWYMRISGLPSILFLVFWRLLPETPRWLIAHGRLEEARDVLIKY 844
>SB_51898| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1712
Score = 30.3 bits (65), Expect = 1.8
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 15/79 (18%)
Frame = +3
Query: 228 NYVDGGYSSATASTSVDI----PTSPRPSPSSKASLY-----------LTPSTDPFHTQL 362
N++ G SS++A T + P +P PSP+++ SL+ +TPST P H
Sbjct: 1542 NHLTGASSSSSACTVISAYPREPLNPPPSPATERSLFTVRSRGYCESVMTPSTCPSHRYY 1601
Query: 363 RSTCLIPSR*PCPNPTRSS 419
R+ + P P S
Sbjct: 1602 RTPRMPPPPTPASTDAEGS 1620
>SB_33377| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = -1
Query: 508 GIRHLLFDWVWRGNVDGNLNVLLHVIWHVFDDLVGLGHGYLDGIRHVLLNWVWNGSVDGV 329
GI HL + + V+G ++ + I H+ + G+GH ++GI H+ + + +V+G+
Sbjct: 45 GIGHLAVEGIGHLAVEGIGHLAVEEIGHLAVE--GIGHLAVEGIGHLAVEGTGHLAVEGI 102
Query: 328 RY 323
R+
Sbjct: 103 RH 104
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/60 (28%), Positives = 34/60 (56%)
Frame = -1
Query: 508 GIRHLLFDWVWRGNVDGNLNVLLHVIWHVFDDLVGLGHGYLDGIRHVLLNWVWNGSVDGV 329
GI HL + + V+G ++ + I H+ + G GH ++GIRH+ + + + +V+G+
Sbjct: 61 GIGHLAVEEIGHLAVEGIGHLAVEGIGHLAVE--GTGHLAVEGIRHIAVEGIGHLAVEGI 118
>SB_30317| Best HMM Match : Protamine_3 (HMM E-Value=0.091)
Length = 761
Score = 30.3 bits (65), Expect = 1.8
Identities = 27/90 (30%), Positives = 40/90 (44%)
Frame = +3
Query: 336 STDPFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTR 515
S+ T+ RS I SR +P RS + H RS S HT+S+ R I +R
Sbjct: 406 SSSRSRTKSRSRSRIRSR----SPARSRSWSHTRSRSRSHTRSRSRSHTRSRSRSRIRSR 461
Query: 516 TS*QALPRQGARAPALPSREARSLPRQGSS 605
+ Q L + R+ R +R+ R+ S
Sbjct: 462 SRSQELDSRTLRSKKSFERRSRASHRESRS 491
>SB_15490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 302
Score = 30.3 bits (65), Expect = 1.8
Identities = 49/165 (29%), Positives = 65/165 (39%), Gaps = 12/165 (7%)
Frame = +3
Query: 282 PTSPRP-SP-SSKASLYLTPSTDPFHTQLRSTCLIPSR*PCP------NPTRSSNTCHIT 437
PT P SP SS +S + + PFHT R IP P P +P +S T
Sbjct: 52 PTPPEGISPLSSSSSASSSSAASPFHTIPRDEFGIPLEFPSPPSLSTLSPLAASPPVS-T 110
Query: 438 *RSTLRFPSTF-PRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREARSLPRQGSSAPT 614
R R PS+F PR + S+RR P++ R R +L R + T
Sbjct: 111 PRQQRRTPSSFTPRSSISRRR---------SDTPKKRRRISVSRRRAGSALGRLTTKKKT 161
Query: 615 LPRGETRAIPRRKLKCPYRSPTPL*NTSVSPSRCPSTG---PYPR 740
PR R C +P ++S+SP S G P PR
Sbjct: 162 PPRRTNLLEAFRAATC---TPAGSRSSSISPGMRSSLGSIAPPPR 203
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.9 bits (64), Expect = 2.3
Identities = 30/146 (20%), Positives = 53/146 (36%), Gaps = 1/146 (0%)
Frame = +3
Query: 252 SATASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTCH 431
+A T+ T+ P +S P T T + T P P P T + T
Sbjct: 2926 TAAPETTAVPKTTAAPETTSVPKTTAAPET----TSVPKTTAAPETTPLPKTTAAPETTP 2981
Query: 432 IT*RSTLRFPSTFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREARSLPRQGSSAP 611
+ + +T P+ T + +P T A P + E +LP+ ++
Sbjct: 2982 LPKTTAAPETTTLPKTTAAPETTTLPKTT---AAPETTTLPKTTAAPETTTLPKTTAAPE 3038
Query: 612 TLPRGETRAIPRRKLKC-PYRSPTPL 686
T E+ + P + +RS +P+
Sbjct: 3039 TTAVHESTSAPEMSSRTEAFRSTSPV 3064
Score = 28.7 bits (61), Expect = 5.4
Identities = 29/121 (23%), Positives = 44/121 (36%), Gaps = 3/121 (2%)
Frame = +3
Query: 249 SSATASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTC 428
++A +TSV T+ P +S P T P L T P P P T + T
Sbjct: 2938 TAAPETTSVP-KTTAAPETTSVPKTTAAPETTP----LPKTTAAPETTPLPKTTAAPETT 2992
Query: 429 HIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS---*QALPRQGARAPALPSREARSLPRQG 599
+ + +T P+ T + +P T+ LP+ A E+ S P
Sbjct: 2993 TLPKTTAAPETTTLPKTTAAPETTTLPKTTAAPETTTLPKTTAAPETTAVHESTSAPEMS 3052
Query: 600 S 602
S
Sbjct: 3053 S 3053
>SB_11629| Best HMM Match : AT_hook (HMM E-Value=0.78)
Length = 147
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +2
Query: 530 LTPSRCSCPSPTQSRSTFPTPSRFQCPNLT 619
L P+R PSP Q + TFP P RF P+ T
Sbjct: 12 LPPARL--PSPVQRKVTFPVPFRFILPSNT 39
>SB_13194| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/49 (48%), Positives = 26/49 (53%)
Frame = +2
Query: 317 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPV 463
V VPY VD VPY V+ VPY V V VP V +V V YV V V
Sbjct: 68 VTVPY-VDVTVPYNVDVTVPY-VDVTVPYGDVTVPYVDGTV-PYVDVTV 113
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +2
Query: 317 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHV 427
V VPY VD VPY V+ VPY V V VP V +V
Sbjct: 167 VTVPY-VDVTVPYNVDVTVPY-VDVTVPYGDVTVPYV 201
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/49 (46%), Positives = 25/49 (51%)
Frame = +2
Query: 317 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPV 463
V VPY VD VPY V+ VPY V VP V +V V YV V V
Sbjct: 75 VTVPYNVDVTVPY-VDVTVPYG-DVTVPYVDGTVPYVDVTV-PYVDVTV 120
>SB_11938| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 272
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/49 (48%), Positives = 26/49 (53%)
Frame = +2
Query: 317 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPV 463
V VPY VD VPY V+ VPY V V VP V +V V YV V V
Sbjct: 68 VTVPY-VDVTVPYNVDVTVPY-VDVTVPYGDVTVPYVDGTV-PYVDVTV 113
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/37 (51%), Positives = 21/37 (56%)
Frame = +2
Query: 317 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHV 427
V VPY VD VPY V+ VPY V V VP V +V
Sbjct: 167 VTVPY-VDVTVPYNVDVTVPY-VDVTVPYGDVTVPYV 201
Score = 27.9 bits (59), Expect = 9.4
Identities = 23/49 (46%), Positives = 25/49 (51%)
Frame = +2
Query: 317 VPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVPV 463
V VPY VD VPY V+ VPY V VP V +V V YV V V
Sbjct: 75 VTVPYNVDVTVPY-VDVTVPYG-DVTVPYVDGTVPYVDVTV-PYVDVTV 120
>SB_14918| Best HMM Match : Extensin_2 (HMM E-Value=0.35)
Length = 1242
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Frame = +2
Query: 317 VPVPYAVDRPVPYPVE---KHVPYP---VKVAVPQPYEVVKHVPYH 436
V P+ +D PYP+E P+P +++ P P ++ H P H
Sbjct: 234 VTSPHRMDHKTPYPIEIVDPKSPHPMGTLRLYSPHPMQITDHKPLH 279
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 29.5 bits (63), Expect = 3.1
Identities = 19/55 (34%), Positives = 26/55 (47%)
Frame = +3
Query: 156 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSATASTSVDIPTSPRPSPSSKAS 320
G G G G +G G G G GG GGYS+ +S+S +S S + K +
Sbjct: 1821 GEGMGAAGGGMGAGGEGGGAGGG----GGGYSAQKSSSSFSYTSSSSSSAARKGA 1871
>SB_59542| Best HMM Match : Pyrophosphatase (HMM E-Value=1.9)
Length = 149
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 368 HVPYPVKVAVPQPYEVVKHVPYHVKEYVK 454
+V Y + VP+ + V+++ +H+K YVK
Sbjct: 82 NVDYVIDNLVPEEIKTVENIDFHIKRYVK 110
>SB_43290| Best HMM Match : AMP-binding (HMM E-Value=6.5e-16)
Length = 980
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 627 ETRAIPRRKLKCPYRSPTP 683
ET P+RKL PYR+PTP
Sbjct: 463 ETDDPPKRKLSNPYRAPTP 481
>SB_59417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1822
Score = 29.1 bits (62), Expect = 4.1
Identities = 23/59 (38%), Positives = 31/59 (52%)
Frame = +3
Query: 285 TSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFP 461
T P PSP + SLY ST T++R T +PS P + +R S H+T ST+ P
Sbjct: 137 TYPPPSPRAHQSLY---STVVLVTKVRLT--LPS--PRAHQSRYSTVVHVTKGSTITAP 188
>SB_42963| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 397
Score = 28.7 bits (61), Expect = 5.4
Identities = 33/119 (27%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Frame = +3
Query: 237 DGGYSSATASTSVDIPTSP-RPSPSSK---ASLYLTPSTDPFHTQLRSTCLIPSR*PCPN 404
D + T TSV TSP PS + + L L H QL T P+ P
Sbjct: 253 DSAPTIPTGGTSVRSNTSPVHPSTVNTPFVSRLLLALVLPTMHLQLLLTKPTPATPPSRA 312
Query: 405 PTRSSNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREAR 581
PTRS + C S P PR + + ++PT L + A A+ + A+
Sbjct: 313 PTRSPSGC----SSDSTNPPPSPRVSGAVPPLMLPTMRQGVLLHEEQTEAEAIDTESAK 367
>SB_14859| Best HMM Match : SEA (HMM E-Value=0.01)
Length = 1776
Score = 28.7 bits (61), Expect = 5.4
Identities = 43/161 (26%), Positives = 59/161 (36%), Gaps = 9/161 (5%)
Frame = +3
Query: 282 PTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPN-PTRSSNTCHIT*RSTLRF 458
P+ RPS + S LTPST +RST + SR PT S+ T ST ++
Sbjct: 91 PSPSRPSLNIAPSSTLTPSTAGHTIDIRSTDHVHSRAQEEQIPTLSTLKTTATSTSTTKY 150
Query: 459 ----PSTFPRHTQSKRRCLIP-TRTS*QALPRQGARAPALP--SREARSLPRQGSSAPTL 617
PS T + P T T P P + + P + T
Sbjct: 151 IPPPPSPPTTTTTTTPETTAPRTTTPETTTPETTTPRTTTPVTTTPRTTTPETTTPETTT 210
Query: 618 PRGET-RAIPRRKLKCPYRSPTPL*NTSVSPSRCPSTGPYP 737
PR T +K ++P P+ T + S PST P
Sbjct: 211 PRTTTPETTTPKKTTAAKKAPLPV--THATTSHAPSTTENP 249
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.7 bits (61), Expect = 5.4
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVKEYVKVP 460
PY PYP + PYP + P P + PY Y P
Sbjct: 139 PYPPSPNAPYPPPPNPPYPPPLYPPPPNPPPPNAPYPPPPYPPPP 183
>SB_5388| Best HMM Match : PH (HMM E-Value=2.5e-08)
Length = 293
Score = 28.7 bits (61), Expect = 5.4
Identities = 22/72 (30%), Positives = 27/72 (37%), Gaps = 2/72 (2%)
Frame = +3
Query: 531 LPRQGARAPALPSREARSLPRQGSSAPT-LPRGETRAIPRRKLKCPYRSPTPL*-NTSVS 704
+P GA P +P A P G PT P A P + P + P
Sbjct: 129 VPYPGAAGPPMPHPTASVYPPPGGYPPTSYPPQPYPAQPYPQQGYPPQPPPQAYPQPGYP 188
Query: 705 PSRCPSTGPYPR 740
P P TGPYP+
Sbjct: 189 PQGYPPTGPYPQ 200
>SB_59448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 234
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +3
Query: 477 HTQSKRRCLIPTRTS*QALPRQGARAPALPSREARSLPRQGSSAPTLPR 623
H ++KR C P P A + P+ + LPR G AP+ R
Sbjct: 42 HYEAKRGCQHPREHISDTEPTHRAHPQSPPTEPTQRLPRDGHPAPSKRR 90
>SB_50629| Best HMM Match : Extensin_2 (HMM E-Value=0.94)
Length = 450
Score = 28.3 bits (60), Expect = 7.1
Identities = 37/148 (25%), Positives = 57/148 (38%), Gaps = 2/148 (1%)
Frame = +3
Query: 288 SPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSS--NTCHIT*RSTLRFP 461
SPR P S +P P + RS P R P R + ++ R P
Sbjct: 283 SPRRVPVSPRQRSNSPRRVPVSPRQRSNS--PRRVPVSPRQRPNLPRRVPLSSRQQSNSP 340
Query: 462 STFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREARSLPRQGSSAPTLPRGETRAI 641
P + + R ++ R Q+ P RAP + ++S R +S +
Sbjct: 341 RRVPLSPRQQSRPVVRGRRYSQS-PN---RAPVSQRQRSQSPQRVQASPRRRSQSPDHVS 396
Query: 642 PRRKLKCPYRSPTPL*NTSVSPSRCPST 725
PRRK + P R+ T S SP+R ++
Sbjct: 397 PRRKSQTPNRASTSTRQQSRSPNRASTS 424
>SB_47303| Best HMM Match : CPSF_A (HMM E-Value=0)
Length = 1291
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +2
Query: 344 PVPYPVEKHVPYPVKVAVPQP--YEVVKHVPYHVKEYVKVPVH 466
P Y V +H P+ +V P Y V++H P+H + P H
Sbjct: 1027 PFHYRVLRHHPFHYRVLRHHPFYYRVLRHHPFHYRVLRHHPFH 1069
>SB_34906| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3922
Score = 28.3 bits (60), Expect = 7.1
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = +3
Query: 156 GYGYGIDGLDVGYIGHGQGLGGAYNYVDGGYSSATASTSVDIPTSPRPSPSSKASLYLTP 335
GYG G G G G+G G GGA + SA A+ V P P ++ P
Sbjct: 3700 GYGGGGGGYGGGGGGYGDGTGGA------AFGSAYAAVPVSGTGQPPAPPDIPTAITDPP 3753
Query: 336 STD 344
S D
Sbjct: 3754 SRD 3756
>SB_31795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1525
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 171 YRIHTRGSGDHVCPISSLG-VQLCFLSSSSHWQPLL 67
+R T GS H P L V L S +HWQPLL
Sbjct: 828 HRQQTSGSKTHRTPFYMLDRVGLPIFSYDNHWQPLL 863
>SB_54616| Best HMM Match : zf-AD (HMM E-Value=0.038)
Length = 607
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 296 TITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVK 442
T+ V+ PVP AV++ P E V PV+V P P E VP V+
Sbjct: 165 TVPAVEQAPVP-AVEQAT-VPAEGQVLVPVEVRAPVPTEEQALVPAEVQ 211
>SB_54614| Best HMM Match : Peptidase_A17 (HMM E-Value=1.2e-38)
Length = 1935
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +2
Query: 296 TITLVKGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVVKHVPYHVK 442
T+ V+ PVP AV++ P E V PV+V P P E VP V+
Sbjct: 165 TVPAVEQAPVP-AVEQAT-VPAEGQVLVPVEVRAPVPTEEQALVPAEVQ 211
>SB_25009| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 641
Score = 28.3 bits (60), Expect = 7.1
Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 1/168 (0%)
Frame = +3
Query: 237 DGGYSSATASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRS 416
D +++ +V + ++P + +S + +TP+ T+ + + P PT +
Sbjct: 416 DATTKDVSSTETVSVTSAPTATLTSAPTATVTPTASNAFTETTTVTSTTTITVLPQPTSA 475
Query: 417 SNTCHIT*RSTLRFPSTFPRHTQSKRRCLIPTRTS*QALPRQGARAPALPSREARSLPRQ 596
S++ IT ST P+T T + +P + A RQ +P PS +P
Sbjct: 476 SSS--ITPSST---PAT-GTATIATATYSVPPSVAPTAKKRQDIASPVQPSPSWVMVPSG 529
Query: 597 GSSAPTLPRGETRAIPRRKLK-CPYRSPTPL*NTSVSPSRCPSTGPYP 737
T+ ET+ + + SP P+ V+ + P + P
Sbjct: 530 SVMKTTVTVWETKFVTASNIAWSTISSPLPMTTVFVTTTVAPLSPAAP 577
>SB_24975| Best HMM Match : ET (HMM E-Value=1)
Length = 316
Score = 28.3 bits (60), Expect = 7.1
Identities = 22/73 (30%), Positives = 31/73 (42%)
Frame = +3
Query: 249 SSATASTSVDIPTSPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTC 428
+S TAS SV T PS S AS+ +TP+T P T + P +S T
Sbjct: 97 ASVTASVSVTPNTPLSPSASVTASVSVTPNT-PLSLSASVTASVSVTPNTPQSPSASVTA 155
Query: 429 HIT*RSTLRFPST 467
++ + P T
Sbjct: 156 SVSVTPNIHTPVT 168
>SB_43004| Best HMM Match : FAD_binding_4 (HMM E-Value=1.4e-18)
Length = 1067
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +3
Query: 246 YSSATASTSVDIPTSPRPSPSSKASLYLTPSTDPFHT 356
+S+ +T +DI TS +P+++ LY+ PS FH+
Sbjct: 313 HSTFALTTFIDIDTSGADTPTARVQLYV-PSRVKFHS 348
>SB_44753| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +3
Query: 288 SPRPSPSSKASLYLTPSTDPFHTQLRSTCLIPSR*PCPNPTRSSNTCHIT*RSTLRFPST 467
SP + + ++ LTP + HT ST P P S+N + ST P +
Sbjct: 484 SPNSNQEDRPAMNLTPPSSTIHTPQSSTIHTPQSSTIHTPQSSTNPTPQS--STSPTPQS 541
Query: 468 FPRHTQSKRRCLIPTRTS*Q 527
HT P R++ Q
Sbjct: 542 STIHTPQSSTSPTPQRSAAQ 561
>SB_27470| Best HMM Match : Baculo_PEP_C (HMM E-Value=2.8)
Length = 627
Score = 27.9 bits (59), Expect = 9.4
Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +3
Query: 531 LPRQGARAPALPSREAR--SLPRQGSSAPTLPRGETR 635
LPR R LP R +LPR G+ TLPR TR
Sbjct: 127 LPRVVTRLDTLPRVVTRLDTLPRVGTRLDTLPRAVTR 163
>SB_7375| Best HMM Match : RVT_1 (HMM E-Value=7.6e-19)
Length = 544
Score = 27.9 bits (59), Expect = 9.4
Identities = 11/27 (40%), Positives = 13/27 (48%)
Frame = +2
Query: 326 PYAVDRPVPYPVEKHVPYPVKVAVPQP 406
PY R PYP + PYP + P P
Sbjct: 190 PYPGRRGAPYPGRRGAPYPGRRGAPYP 216
>SB_64| Best HMM Match : Rho_N (HMM E-Value=1.8e-07)
Length = 320
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +2
Query: 311 KGVPVPYAVDRPVPYPVEKHVPYPVKVAVPQPYEVV 418
+ +P+P A R +PYP K +P P K QP + +
Sbjct: 94 RSLPIP-APRRNIPYPQPKPIPTPRKNTPNQPQKPI 128
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,442,296
Number of Sequences: 59808
Number of extensions: 482128
Number of successful extensions: 2540
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 1709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2367
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2046258890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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