Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1448
         (754 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    26   0.33 
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   7.1  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   7.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   9.4  

>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 26.2 bits (55), Expect = 0.33
 Identities = 14/29 (48%), Positives = 20/29 (68%)
 Frame = +3

Query: 246 YSSATASTSVDIPTSPRPSPSSKASLYLT 332
           Y SA A++S    TSPRP+ S+ A+L L+
Sbjct: 829 YLSAAATSSTS--TSPRPASSTAATLVLS 855


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -1

Query: 358 WVWNGSVDGVRYRDAF 311
           W WN ++  + ++D F
Sbjct: 659 WAWNFTIPNMYFKDVF 674


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 5/16 (31%), Positives = 10/16 (62%)
 Frame = -1

Query: 358 WVWNGSVDGVRYRDAF 311
           W WN ++  + ++D F
Sbjct: 659 WAWNFTIPNMYFKDVF 674


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/35 (28%), Positives = 14/35 (40%)
 Frame = +3

Query: 225  YNYVDGGYSSATASTSVDIPTSPRPSPSSKASLYL 329
            Y+ +D  YS+   +        P P P S    YL
Sbjct: 1335 YSSIDSDYSTLERTAWRQQQPPPPPPPPSSGQAYL 1369


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 463 PRSRAIPSRKEGALSLHVPVDRP 531
           P  R     ++GAL LH   DRP
Sbjct: 118 PSFRCTERPEDGALILHYYSDRP 140


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 463 PRSRAIPSRKEGALSLHVPVDRP 531
           P  R     ++GAL LH   DRP
Sbjct: 118 PSFRCTERPEDGALILHYYSDRP 140


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,389
Number of Sequences: 438
Number of extensions: 4764
Number of successful extensions: 15
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)