Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1447
         (736 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O51118 Cluster: V-type ATP synthase subunit I; n=3; Bor...    33   7.3  
UniRef50_Q9EMJ9 Cluster: AMV207; n=2; Amsacta moorei entomopoxvi...    33   9.6  

>UniRef50_O51118 Cluster: V-type ATP synthase subunit I; n=3;
           Borrelia burgdorferi group|Rep: V-type ATP synthase
           subunit I - Borrelia burgdorferi (Lyme disease
           spirochete)
          Length = 608

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
 Frame = +1

Query: 157 ELNSVFNILIITY--GILKLDY*HVGTFIRS*KKSTFQSQIQLKFHLHSFV*NFYLLINL 330
           E NSV NI+ I +  G+L++   HV  F R  K+      I     L   V  +YL++NL
Sbjct: 398 EKNSVQNIIFICFSIGVLQISLAHVWNFFRQVKEKPHIHSIAQIGWLMCIVGLYYLVLNL 457

Query: 331 KTILQYYQMFNEI 369
                 + M+N +
Sbjct: 458 ILSQSRFPMYNVV 470


>UniRef50_Q9EMJ9 Cluster: AMV207; n=2; Amsacta moorei entomopoxvirus
           'L'|Rep: AMV207 - Amsacta moorei entomopoxvirus (AmEPV)
          Length = 476

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 18/47 (38%), Positives = 26/47 (55%)
 Frame = +1

Query: 589 RGAVPTAYKIGPTFTLSTR*KNSH*SHRMFDKSYRSFVNKVDRLSKT 729
           R A+   +K+G T  LS+R  N + SH   D+ Y  +  KV  +SKT
Sbjct: 285 RYAMINNFKVGKTDNLSSRQSNFNSSHNTEDEFYICYYEKVFNISKT 331


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,067,711
Number of Sequences: 1657284
Number of extensions: 12203289
Number of successful extensions: 25568
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25558
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)