Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1447
         (736 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.       28   6.0  
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ...    28   6.0  
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ...    28   6.0  
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ...    28   6.0  
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ...    28   6.0  

>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
          Length = 1666

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 551 FVWNGIVCLRLPLGALFQLHTKLGQPLRYR 640
           FV+N +V + LP     QL+T+LG+ L+YR
Sbjct: 734 FVFNSLVSVNLPAA---QLNTRLGKCLQYR 760


>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
           protein W03F11.6e protein.
          Length = 1039

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 551 FVWNGIVCLRLPLGALFQLHTKLGQPLRYR 640
           FV+N +V + LP     QL+T+LG+ L+YR
Sbjct: 732 FVFNSLVSVNLPAA---QLNTRLGKCLQYR 758


>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
           protein W03F11.6d protein.
          Length = 1184

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 551 FVWNGIVCLRLPLGALFQLHTKLGQPLRYR 640
           FV+N +V + LP     QL+T+LG+ L+YR
Sbjct: 732 FVFNSLVSVNLPAA---QLNTRLGKCLQYR 758


>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
           protein W03F11.6c protein.
          Length = 1419

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 551 FVWNGIVCLRLPLGALFQLHTKLGQPLRYR 640
           FV+N +V + LP     QL+T+LG+ L+YR
Sbjct: 732 FVFNSLVSVNLPAA---QLNTRLGKCLQYR 758


>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
           protein W03F11.6a protein.
          Length = 1658

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 551 FVWNGIVCLRLPLGALFQLHTKLGQPLRYR 640
           FV+N +V + LP     QL+T+LG+ L+YR
Sbjct: 732 FVFNSLVSVNLPAA---QLNTRLGKCLQYR 758


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,392,587
Number of Sequences: 27780
Number of extensions: 311738
Number of successful extensions: 625
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 625
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)