Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1446
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X92396-1|CAA63133.1| 220|Homo sapiens ORF protein. 176 6e-44
BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1 pr... 176 6e-44
AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1 va... 176 6e-44
AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1 pr... 176 6e-44
AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like prot... 171 2e-42
AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAM... 74 7e-19
>X92396-1|CAA63133.1| 220|Homo sapiens ORF protein.
Length = 220
Score = 176 bits (429), Expect = 6e-44
Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = +1
Query: 247 AYIFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLV 426
A +F++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 427 YFCITDDKFQRSRAFLFLNEIKRRFTTDLLTPHRQQYLTP*TVN--FGRVLATEMKHYSE 600
Y CITDD F+RSRAF FLNEIK+RF T R Q P +N F VLA ++KH+SE
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY--GSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 601 SRDLDNISRVHGELDELKNIMGKNIDNMAMAXEK 702
++ LD + ++DELK IM +NID +A E+
Sbjct: 120 NKGLDKVMETQAQVDELKGIMVRNIDLVAQRGER 153
>BC056141-1|AAH56141.1| 220|Homo sapiens synaptobrevin-like 1
protein.
Length = 220
Score = 176 bits (429), Expect = 6e-44
Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = +1
Query: 247 AYIFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLV 426
A +F++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 427 YFCITDDKFQRSRAFLFLNEIKRRFTTDLLTPHRQQYLTP*TVN--FGRVLATEMKHYSE 600
Y CITDD F+RSRAF FLNEIK+RF T R Q P +N F VLA ++KH+SE
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY--GSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 601 SRDLDNISRVHGELDELKNIMGKNIDNMAMAXEK 702
++ LD + ++DELK IM +NID +A E+
Sbjct: 120 NKGLDKVMETQAQVDELKGIMVRNIDLVAQRGER 153
>AK222794-1|BAD96514.1| 220|Homo sapiens synaptobrevin-like 1
variant protein.
Length = 220
Score = 176 bits (429), Expect = 6e-44
Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = +1
Query: 247 AYIFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLV 426
A +F++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 427 YFCITDDKFQRSRAFLFLNEIKRRFTTDLLTPHRQQYLTP*TVN--FGRVLATEMKHYSE 600
Y CITDD F+RSRAF FLNEIK+RF T R Q P +N F VLA ++KH+SE
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY--GSRAQTAPPYAMNSEFSSVLAAQLKHHSE 119
Query: 601 SRDLDNISRVHGELDELKNIMGKNIDNMAMAXEK 702
++ LD + ++DELK IM +NID +A E+
Sbjct: 120 NKGLDKVMETQAQVDELKGIMVRNIDLVAQRGER 153
>AJ271736-1|CAB96816.1| 220|Homo sapiens synaptobrevin-like 1
protein protein.
Length = 220
Score = 176 bits (429), Expect = 6e-44
Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 2/154 (1%)
Frame = +1
Query: 247 AYIFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLV 426
A +F++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 427 YFCITDDKFQRSRAFLFLNEIKRRFTTDLLTPHRQQYLTP*TVN--FGRVLATEMKHYSE 600
Y CITDD F+RSRAF FLNEIK+RF T R Q P +N F VLA ++KH+SE
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY--GSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 601 SRDLDNISRVHGELDELKNIMGKNIDNMAMAXEK 702
++ LD + ++DELK IM +NID +A E+
Sbjct: 120 NKGLDKVMETQAQVDELKGIMVRNIDLVAQRGER 153
>AJ295938-1|CAC16891.1| 260|Homo sapiens synaptobrevin like protein
1B protein.
Length = 260
Score = 171 bits (416), Expect = 2e-42
Identities = 82/145 (56%), Positives = 106/145 (73%), Gaps = 2/145 (1%)
Frame = +1
Query: 247 AYIFSIVARGTVVLAKYATCQGNFTEVAEQILSKIPPHDDKLTYSHGNYLFHYIAENKLV 426
A +F++VARGT +LAK+A C GNF EV EQIL+KIP ++KLTYSHGNYLFHYI ++++V
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIV 61
Query: 427 YFCITDDKFQRSRAFLFLNEIKRRFTTDLLTPHRQQYLTP*TVN--FGRVLATEMKHYSE 600
Y CITDD F+RSRAF FLNEIK+RF T R Q P +N F VLA ++KH+SE
Sbjct: 62 YLCITDDDFERSRAFNFLNEIKKRFQTTY--GSRAQTALPYAMNSEFSSVLAAQLKHHSE 119
Query: 601 SRDLDNISRVHGELDELKNIMGKNI 675
++ LD + ++DELK IM +NI
Sbjct: 120 NKGLDKVMETQAQVDELKGIMVRNI 144
>AJ549301-1|CAD70593.2| 179|Homo sapiens tetanus insensitive VAMP
(Ti-VAMP) protein.
Length = 179
Score = 74.1 bits (174), Expect(2) = 7e-19
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Frame = +1
Query: 445 DKFQRSRAFLFLNEIKRRFTTDLLTPHRQQYLTP*TVN--FGRVLATEMKHYSESRDLDN 618
+ F+RSRAF FLNEIK+RF T + R Q P +N F VLA ++KH+SE++ LD
Sbjct: 27 EDFERSRAFNFLNEIKKRFQTTYGS--RAQTALPYAMNSEFSSVLAAQLKHHSENKGLDK 84
Query: 619 ISRVHGELDELKNIMGKNIDNMAMAXEK 702
+ ++DELK IM +NID +A E+
Sbjct: 85 VMETQAQVDELKGIMVRNIDLVAQRGER 112
Score = 39.9 bits (89), Expect(2) = 7e-19
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = +1
Query: 247 AYIFSIVARGTVVLAKYATCQGNFTEVAEQ 336
A +F++VARGT +LAK+A C GNF E E+
Sbjct: 2 AILFAVVARGTTILAKHAWCGGNFLEDFER 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,254,877
Number of Sequences: 237096
Number of extensions: 1972909
Number of successful extensions: 3520
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3508
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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