Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1446
         (752 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   4.1  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   4.1  
DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein ...    23   4.1  
AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein ...    23   4.1  
AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory...    23   4.1  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   4.1  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 673 CFYPLYFLIHLILHELLKCCPS 608
           C+ P +FL+++I+     CCPS
Sbjct: 339 CWLP-FFLMYVIVPFCPDCCPS 359


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 673 CFYPLYFLIHLILHELLKCCPS 608
           C+ P +FL+++I+     CCPS
Sbjct: 339 CWLP-FFLMYVIVPFCPDCCPS 359


>DQ855487-1|ABH88174.1|  125|Apis mellifera chemosensory protein 6
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 324 FSEITLTSCIFSEDYSASSHDTEYIGIVNN 235
           F  +T+T C+ +EDY+    D +   I+ N
Sbjct: 8   FVLVTIT-CVIAEDYTTKYDDMDIDRILQN 36


>AJ973402-1|CAJ01449.1|  125|Apis mellifera hypothetical protein
           protein.
          Length = 125

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 324 FSEITLTSCIFSEDYSASSHDTEYIGIVNN 235
           F  +T+T C+ +EDY+    D +   I+ N
Sbjct: 8   FVLVTIT-CVIAEDYTTKYDDMDIDRILQN 36


>AJ555537-1|CAD88245.1|  210|Apis mellifera putative chemosensory
           receptor 2 protein.
          Length = 210

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = -3

Query: 738 KLSSLVPQAVQAFLXRHXHVINVFT 664
           K   LV  A++ ++ RH H++ + T
Sbjct: 94  KQEMLVRSAIKYWVERHKHIVRLVT 118


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 673 CFYPLYFLIHLILHELLKCCPS 608
           C+ P +FL+++I+     CCPS
Sbjct: 339 CWLP-FFLMYVIVPFCPDCCPS 359


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,914
Number of Sequences: 438
Number of extensions: 4621
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)