Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1443
         (420 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPa...    62   6e-09
UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPa...    38   0.083
UniRef50_Q8TA24 Cluster: Putative transitional endoplasmic retic...    37   0.14 
UniRef50_UPI000023E67B Cluster: predicted protein; n=1; Gibberel...    31   9.5  

>UniRef50_P55072 Cluster: Transitional endoplasmic reticulum ATPase
           (TER ATPase) (15S Mg(2+)- ATPase p97 subunit); n=169;
           Eukaryota|Rep: Transitional endoplasmic reticulum ATPase
           (TER ATPase) (15S Mg(2+)- ATPase p97 subunit) - Homo
           sapiens (Human)
          Length = 806

 Score = 61.7 bits (143), Expect = 6e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFPT 307
           AM+FA RSVS NDIRKY+M AQTLQQSRGFG +FRFP+
Sbjct: 739 AMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS 775


>UniRef50_A4ICJ9 Cluster: Transitional endoplasmic reticulum ATPase,
           putative; n=2; Leishmania|Rep: Transitional endoplasmic
           reticulum ATPase, putative - Leishmania infantum
          Length = 690

 Score = 37.9 bits (84), Expect = 0.083
 Identities = 19/33 (57%), Positives = 23/33 (69%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTN 322
           AM+ A RSVS  DIR+Y M   +LQQSR FG +
Sbjct: 632 AMRGARRSVSDADIRRYDMFKTSLQQSRTFGAS 664


>UniRef50_Q8TA24 Cluster: Putative transitional endoplasmic
           reticulum ATPase; n=1; Heterodera glycines|Rep: Putative
           transitional endoplasmic reticulum ATPase - Heterodera
           glycines (Soybean cyst nematode worm)
          Length = 89

 Score = 37.1 bits (82), Expect = 0.14
 Identities = 15/19 (78%), Positives = 17/19 (89%)
 Frame = -1

Query: 366 MXAQTLQQSRGFGTNFRFP 310
           M AQTLQQ RGFGT+F+FP
Sbjct: 1   MFAQTLQQQRGFGTSFKFP 19


>UniRef50_UPI000023E67B Cluster: predicted protein; n=1; Gibberella
           zeae PH-1|Rep: predicted protein - Gibberella zeae PH-1
          Length = 417

 Score = 31.1 bits (67), Expect = 9.5
 Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
 Frame = -3

Query: 400 LRVRQRHPQVQ-DVXADPAAEPRLWNQFQIPNKXGSYRGH 284
           LR+ + HP  Q D    P+++PRL +QF + N   S + H
Sbjct: 167 LRLTRMHPITQYDGLPQPSSQPRLVSQFPLENNMNSEKTH 206


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 355,649,264
Number of Sequences: 1657284
Number of extensions: 6274056
Number of successful extensions: 14400
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14398
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)