Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1443
         (420 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC122550-1|AAI22551.1|  475|Homo sapiens VCP protein protein.          62   1e-09
BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing prot...    62   1e-09
BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing prot...    62   1e-09
BC007562-1|AAH07562.2|  644|Homo sapiens VCP protein protein.          62   1e-09
AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing prot...    62   1e-09
AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmi...    62   1e-09
AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.           62   1e-09

>BC122550-1|AAI22551.1|  475|Homo sapiens VCP protein protein.
          Length = 475

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFPT 307
           AM+FA RSVS NDIRKY+M AQTLQQSRGFG +FRFP+
Sbjct: 408 AMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS 444


>BC121794-1|AAI21795.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFPT 307
           AM+FA RSVS NDIRKY+M AQTLQQSRGFG +FRFP+
Sbjct: 739 AMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS 775


>BC110913-1|AAI10914.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFPT 307
           AM+FA RSVS NDIRKY+M AQTLQQSRGFG +FRFP+
Sbjct: 739 AMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS 775


>BC007562-1|AAH07562.2|  644|Homo sapiens VCP protein protein.
          Length = 644

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFPT 307
           AM+FA RSVS NDIRKY+M AQTLQQSRGFG +FRFP+
Sbjct: 577 AMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS 613


>AL353795-2|CAH70993.1|  806|Homo sapiens valosin-containing protein
           protein.
          Length = 806

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFPT 307
           AM+FA RSVS NDIRKY+M AQTLQQSRGFG +FRFP+
Sbjct: 739 AMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS 775


>AF100752-1|AAD43016.1|  806|Homo sapiens transitional endoplasmic
           reticulum ATPase protein.
          Length = 806

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFPT 307
           AM+FA RSVS NDIRKY+M AQTLQQSRGFG +FRFP+
Sbjct: 739 AMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS 775


>AC004472-1|AAC07984.1|  806|Homo sapiens TERA_HUMAN protein.
          Length = 806

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 30/38 (78%), Positives = 34/38 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFPT 307
           AM+FA RSVS NDIRKY+M AQTLQQSRGFG +FRFP+
Sbjct: 739 AMRFARRSVSDNDIRKYEMFAQTLQQSRGFG-SFRFPS 775


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,395,929
Number of Sequences: 237096
Number of extensions: 974702
Number of successful extensions: 1854
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1850
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3202085264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)