Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1443
         (420 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001521-1|AAN71276.1|  297|Drosophila melanogaster LP12034p pro...    69   3e-12
AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM0288...    69   3e-12
AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional...    69   3e-12
AE013599-985|AAF58864.1|  297|Drosophila melanogaster CG2331-PB,...    69   3e-12
AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,...    69   3e-12
AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic ...    61   7e-10
AY069736-1|AAL39881.1|  831|Drosophila melanogaster LP05464p pro...    28   5.8  
AL035311-2|CAA22949.1| 1854|Drosophila melanogaster EG:52C10.5 p...    28   5.8  
AE013599-2562|AAS64818.1| 1809|Drosophila melanogaster CG6355-PB...    28   5.8  
AE013599-2561|AAF57789.1| 1809|Drosophila melanogaster CG6355-PA...    28   5.8  

>BT001521-1|AAN71276.1|  297|Drosophila melanogaster LP12034p
           protein.
          Length = 297

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFP 310
           AMKFA RSVS NDIRKY+M AQTLQQSRGFG NFRFP
Sbjct: 233 AMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFP 269


>AF132553-1|AAD27852.1|  801|Drosophila melanogaster BcDNA.GM02885
           protein.
          Length = 801

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFP 310
           AMKFA RSVS NDIRKY+M AQTLQQSRGFG NFRFP
Sbjct: 737 AMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFP 773


>AF047037-1|AAC27447.1|  801|Drosophila melanogaster transitional
           endoplasmic reticulumATPase TER94 protein.
          Length = 801

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFP 310
           AMKFA RSVS NDIRKY+M AQTLQQSRGFG NFRFP
Sbjct: 737 AMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFP 773


>AE013599-985|AAF58864.1|  297|Drosophila melanogaster CG2331-PB,
           isoform B protein.
          Length = 297

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFP 310
           AMKFA RSVS NDIRKY+M AQTLQQSRGFG NFRFP
Sbjct: 233 AMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFP 269


>AE013599-984|AAF58863.1|  801|Drosophila melanogaster CG2331-PA,
           isoform A protein.
          Length = 801

 Score = 68.5 bits (160), Expect = 3e-12
 Identities = 32/37 (86%), Positives = 33/37 (89%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFP 310
           AMKFA RSVS NDIRKY+M AQTLQQSRGFG NFRFP
Sbjct: 737 AMKFARRSVSDNDIRKYEMFAQTLQQSRGFGQNFRFP 773


>AF202034-1|AAF17568.1|  799|Drosophila melanogaster endoplasmic
           reticulum membranefusion protein protein.
          Length = 799

 Score = 60.9 bits (141), Expect = 7e-10
 Identities = 28/37 (75%), Positives = 30/37 (81%)
 Frame = -1

Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFP 310
           AMKFA RSVS NDIRKY+M A   +QSRGFG NFRFP
Sbjct: 735 AMKFARRSVSDNDIRKYEMFAPDFEQSRGFGQNFRFP 771


>AY069736-1|AAL39881.1|  831|Drosophila melanogaster LP05464p
           protein.
          Length = 831

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 210 LARDLGASPPSRYXXTNVLSVCLACRPTTP 121
           L  DL  S P+R   T+  S+C A  PT P
Sbjct: 55  LTEDLTRSDPTRIYFTSWCSICNATTPTIP 84


>AL035311-2|CAA22949.1| 1854|Drosophila melanogaster EG:52C10.5
            protein.
          Length = 1854

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 210  LARDLGASPPSRYXXTNVLSVCLACRPTTP 121
            L  DL  S P+R   T+  S+C A  PT P
Sbjct: 1073 LTEDLTRSDPTRIYFTSWCSICNATTPTIP 1102


>AE013599-2562|AAS64818.1| 1809|Drosophila melanogaster CG6355-PB,
            isoform B protein.
          Length = 1809

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 210  LARDLGASPPSRYXXTNVLSVCLACRPTTP 121
            L  DL  S P+R   T+  S+C A  PT P
Sbjct: 1033 LTEDLTRSDPTRIYFTSWCSICNATTPTIP 1062


>AE013599-2561|AAF57789.1| 1809|Drosophila melanogaster CG6355-PA,
            isoform A protein.
          Length = 1809

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -1

Query: 210  LARDLGASPPSRYXXTNVLSVCLACRPTTP 121
            L  DL  S P+R   T+  S+C A  PT P
Sbjct: 1033 LTEDLTRSDPTRIYFTSWCSICNATTPTIP 1062


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,364,100
Number of Sequences: 53049
Number of extensions: 305916
Number of successful extensions: 660
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 632
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)