Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1443
(420 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 66 7e-12
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 66 7e-12
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 66 7e-12
Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical p... 30 0.77
AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical ... 27 4.1
U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical pr... 27 5.5
U41038-3|AAK29708.3| 623|Caenorhabditis elegans Cadherin family... 27 7.2
U80441-7|AAB37655.1| 252|Caenorhabditis elegans Hypothetical pr... 26 9.5
U80441-6|AAT68894.1| 256|Caenorhabditis elegans Hypothetical pr... 26 9.5
U58750-2|AAB00642.1| 615|Caenorhabditis elegans Polo kinase pro... 26 9.5
AF059024-1|AAC14425.1| 615|Caenorhabditis elegans polo-like kin... 26 9.5
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 66.5 bits (155), Expect = 7e-12
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFP 310
AMKFA RSV+ NDIRKY+M AQTLQQSRGFG NF+FP
Sbjct: 750 AMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 786
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 66.5 bits (155), Expect = 7e-12
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFP 310
AMKFA RSV+ NDIRKY+M AQTLQQSRGFG NF+FP
Sbjct: 748 AMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 784
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 66.5 bits (155), Expect = 7e-12
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -1
Query: 420 AMKFAXRSVSANDIRKYKMXAQTLQQSRGFGTNFRFP 310
AMKFA RSV+ NDIRKY+M AQTLQQSRGFG NF+FP
Sbjct: 748 AMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 784
>Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical
protein C44C10.9b protein.
Length = 234
Score = 29.9 bits (64), Expect = 0.77
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = -3
Query: 325 QFQIPNKXGSYRGHGYFNGRPAHVQXEGGDDDLXR---YSVSRS 203
+++ ++ G Y+ +GY NGR V+ GG DD R Y+VS++
Sbjct: 144 KYETGSRNGGYK-NGYGNGRNLDVERSGGPDDGYRRREYAVSQN 186
>AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical
protein C17A2.5 protein.
Length = 731
Score = 27.5 bits (58), Expect = 4.1
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -3
Query: 130 HHTNMAPGPGRFTYAIV 80
+HT++ PGPG+F A++
Sbjct: 491 NHTSLEPGPGKFKLAVI 507
>U41014-3|AAK32948.1| 519|Caenorhabditis elegans Hypothetical
protein C06G1.1 protein.
Length = 519
Score = 27.1 bits (57), Expect = 5.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 341 LCCRVCANILYLRMSLADTERXANFI 418
+ C+V AN L L+ S AD+ AN+I
Sbjct: 160 ITCKVAANNLQLQFSQADSALLANYI 185
>U41038-3|AAK29708.3| 623|Caenorhabditis elegans Cadherin family
protein 9 protein.
Length = 623
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 311 GNLKLVPKPRLCCRVCANIL 370
G +KL+PK RL C+VC I+
Sbjct: 475 GVVKLLPKARLQCKVCELIV 494
>U80441-7|AAB37655.1| 252|Caenorhabditis elegans Hypothetical
protein F27C1.2a protein.
Length = 252
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -3
Query: 370 QDVXADPAAEPRLWNQFQIPNKXGSYRGHGYFNGRPAHVQXEGGDDDLXRYSVSRS 203
++V A P + + N+ + GS+ GHG G + GG +++ + R+
Sbjct: 40 KEVEAVPVPDEKDQNEHHEHSSHGSHAGHGGHEGHMMKMWFHGGFEEVILFDFWRT 95
>U80441-6|AAT68894.1| 256|Caenorhabditis elegans Hypothetical
protein F27C1.2b protein.
Length = 256
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/56 (23%), Positives = 26/56 (46%)
Frame = -3
Query: 370 QDVXADPAAEPRLWNQFQIPNKXGSYRGHGYFNGRPAHVQXEGGDDDLXRYSVSRS 203
++V A P + + N+ + GS+ GHG G + GG +++ + R+
Sbjct: 40 KEVEAVPVPDEKDQNEHHEHSSHGSHAGHGGHEGHMMKMWFHGGFEEVILFDFWRT 95
>U58750-2|AAB00642.1| 615|Caenorhabditis elegans Polo kinase
protein 3 protein.
Length = 615
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 400 LRVRQRHPQVQDVXADPAAEPRLWNQFQIPNKXGSYRGHGYF 275
LR R Q ++ P P +++ Q+P + G++ G G F
Sbjct: 5 LRTRGNSAQDKNKKHVPNVPPIIYDDMQVPYEKGAFLGEGGF 46
>AF059024-1|AAC14425.1| 615|Caenorhabditis elegans polo-like kinase
protein.
Length = 615
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = -3
Query: 400 LRVRQRHPQVQDVXADPAAEPRLWNQFQIPNKXGSYRGHGYF 275
LR R Q ++ P P +++ Q+P + G++ G G F
Sbjct: 5 LRTRGNSAQDKNKKHVPNVPPIIYDDMQVPYEKGAFLGEGGF 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,903,434
Number of Sequences: 27780
Number of extensions: 140431
Number of successful extensions: 333
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 316
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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