Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1442
(763 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 24 1.2
AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain tran... 24 1.5
AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein p... 24 1.5
AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein p... 24 1.5
AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein p... 23 2.0
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 23 2.0
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 2.7
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 2.7
DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein. 22 4.6
AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment h... 22 4.6
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 22 4.6
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 22 6.1
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +1
Query: 40 AWSLLDASRDVPNNCGFSG 96
A SL++++R+VP C F+G
Sbjct: 735 ATSLVESNRNVPQKCIFNG 753
>AY043293-2|AAK96034.1| 353|Tribolium castaneum homeodomain
transcription factor Labialprotein.
Length = 353
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 395 LAPTSLPTPTSQVALLEPLPTRHPSC 472
+ P PT +S AL P P SC
Sbjct: 214 IPPAEFPTTSSSSALESPNPASRSSC 239
>AF231104-1|AAF64149.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 395 LAPTSLPTPTSQVALLEPLPTRHPSC 472
+ P PT +S AL P P SC
Sbjct: 3 IPPAEFPTTSSSSALESPNPASRSSC 28
>AF231103-1|AAF64148.1| 142|Tribolium castaneum labial protein
protein.
Length = 142
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 395 LAPTSLPTPTSQVALLEPLPTRHPSC 472
+ P PT +S AL P P SC
Sbjct: 3 IPPAEFPTTSSSSALESPNPASRSSC 28
>AF230312-1|AAF64146.1| 253|Tribolium castaneum labial protein
protein.
Length = 253
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 395 LAPTSLPTPTSQVALLEPLPTRHPSC 472
+ P PT +S AL P P SC
Sbjct: 214 IPPAEFPTTSSSSALESPDPASRSSC 239
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 23.4 bits (48), Expect = 2.0
Identities = 10/38 (26%), Positives = 23/38 (60%)
Frame = +2
Query: 497 HHFPRSSSDQEEVCPRAGDNLHRTYYLHRCSPRSFLSS 610
H S+S +++ + GD+ H+T++L + +P + L +
Sbjct: 253 HSVDNSNSSEKKSSIQHGDDAHKTHHLDK-NPENTLGT 289
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 286 PGEEFYRGRWFYDG 245
P +E WFYDG
Sbjct: 1165 PSDEVMENSWFYDG 1178
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
protein.
Length = 1464
Score = 23.0 bits (47), Expect = 2.7
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -1
Query: 286 PGEEFYRGRWFYDG 245
P +E WFYDG
Sbjct: 1165 PSDEVMENSWFYDG 1178
>DQ414247-1|ABD63009.2| 414|Tribolium castaneum paired protein.
Length = 414
Score = 22.2 bits (45), Expect = 4.6
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = +2
Query: 413 PTPTSQVALLEPLPTRHPSCRP--CRSHRLHHFPRSS 517
PTPTS + L P P S P +H + H P S
Sbjct: 313 PTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPYPS 349
>AY695258-1|AAW21975.1| 232|Tribolium castaneum muscle segment
homeodomain protein protein.
Length = 232
Score = 22.2 bits (45), Expect = 4.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = +1
Query: 316 LISQPIAYSAHFIKKRSPQWPVSYIAPSSYITPNTYIASGP 438
LI QP+ S + PQWP ++ + +P T +GP
Sbjct: 64 LIPQPLHPSVP--RLGHPQWPFAWGSLXRSSSPQTSAPTGP 102
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = -3
Query: 95 PEKPQLLGTSREASRRLQAQQPRQLIKHT 9
PEK G + S QA QP I+H+
Sbjct: 117 PEKGGGAGAAASGSAAAQAGQPDNAIEHS 145
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 21.8 bits (44), Expect = 6.1
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +1
Query: 616 SYNLHGAPLVTSYTTPLVYSAP 681
S + GAP++ S PL+Y P
Sbjct: 143 SLQVPGAPMMMSSHGPLMYGQP 164
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,725
Number of Sequences: 336
Number of extensions: 3270
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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