Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1440
(302 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 94 2e-20
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 4e-19
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 90 4e-19
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 88 1e-18
SB_56| Best HMM Match : Actin (HMM E-Value=0) 88 1e-18
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 87 3e-18
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 4e-10
SB_54| Best HMM Match : Actin (HMM E-Value=0) 60 4e-10
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 48 2e-06
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 2e-05
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.015
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.059
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.078
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.10
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.14
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.14
SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9) 29 0.72
SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.72
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.3
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 28 1.7
SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_47339| Best HMM Match : Rubredoxin (HMM E-Value=0.76) 28 1.7
SB_23698| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 1.7
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 28 1.7
SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 2.2
SB_18995| Best HMM Match : rve (HMM E-Value=0.0012) 27 2.2
SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24) 27 2.9
SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1) 27 2.9
SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5) 27 2.9
SB_20183| Best HMM Match : Astacin (HMM E-Value=2.2e-06) 27 3.9
SB_3900| Best HMM Match : DUF1070 (HMM E-Value=1) 27 3.9
SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9) 27 3.9
SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.9
SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06) 27 3.9
SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29) 26 5.1
SB_34833| Best HMM Match : E6 (HMM E-Value=7.2) 26 5.1
SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6) 26 5.1
SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 5.1
SB_56014| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08) 26 5.1
SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3) 26 5.1
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 26 5.1
SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3) 26 5.1
SB_51102| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.7
SB_53826| Best HMM Match : HipA_C (HMM E-Value=2.7) 26 6.7
SB_24332| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 6.7
SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73) 26 6.7
SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88) 26 6.7
SB_47153| Best HMM Match : CCG (HMM E-Value=3.4) 25 8.9
SB_34040| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9) 25 8.9
SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
SB_4354| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 8.9
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 94.3 bits (224), Expect = 2e-20
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.078
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ GVMVGMGQKDSYV
Sbjct: 37 GRPRHQGVMVGMGQKDSYV 55
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 89.8 bits (213), Expect = 4e-19
Identities = 40/43 (93%), Positives = 42/43 (97%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.078
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ GVMVGMGQKDSYV
Sbjct: 37 GRPRHQGVMVGMGQKDSYV 55
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 89.8 bits (213), Expect = 4e-19
Identities = 38/43 (88%), Positives = 42/43 (97%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 32.3 bits (70), Expect = 0.078
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ GVMVGMGQKDSYV
Sbjct: 37 GRPRHQGVMVGMGQKDSYV 55
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 88.2 bits (209), Expect = 1e-18
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1
Query: 133 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 32.3 bits (70), Expect = 0.078
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ GVMVGMGQKDSYV
Sbjct: 36 GRPRHQGVMVGMGQKDSYV 54
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 88.2 bits (209), Expect = 1e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +1
Query: 133 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 32.3 bits (70), Expect = 0.078
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ GVMVGMGQKDSYV
Sbjct: 36 GRPRHQGVMVGMGQKDSYV 54
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 87.0 bits (206), Expect = 3e-18
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +1
Query: 133 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
Score = 32.3 bits (70), Expect = 0.078
Identities = 14/19 (73%), Positives = 15/19 (78%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ GVMVGMGQKDSYV
Sbjct: 36 GRPRHQGVMVGMGQKDSYV 54
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 4e-10
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 252
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 59.7 bits (138), Expect = 4e-10
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 252
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 47.6 bits (108), Expect = 2e-06
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 121 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 246
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQ 734
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 44.4 bits (100), Expect = 2e-05
Identities = 17/33 (51%), Positives = 24/33 (72%)
Frame = +1
Query: 145 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 243
+ +V DNG+G K G+AG + P +FPS+VGRP
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRP 39
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 34.7 bits (76), Expect = 0.015
Identities = 18/39 (46%), Positives = 25/39 (64%)
Frame = -3
Query: 249 MAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFV 133
MA + D G++ + SI+S E GLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 32.7 bits (71), Expect = 0.059
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 120 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQC 4
L++L C C+K + KR + + Q+P C C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQCMNTC 658
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 32.3 bits (70), Expect = 0.078
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 132 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQ 7
A L L+KL CRC K +R + + + IP C C+++
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCTSE 1337
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 31.9 bits (69), Expect = 0.10
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 266 TDHHP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTT 153
++ +P W GNT R PAKP+L++P P S T
Sbjct: 526 SNQYPKWLQQVKDGGNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 224 GNTARGASSPAKPALHIPEPLSTT 153
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 224 GNTARGASSPAKPALHIPEPLSTT 153
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_59726| Best HMM Match : Keratin_B2 (HMM E-Value=5.9)
Length = 319
Score = 29.1 bits (62), Expect = 0.72
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 269 HTDHHP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
H HHP + LPT T SP K H P T+A T+++HI
Sbjct: 247 HCPHHP-VQTLPT-SARTNTAHISPCKHCPHQPVQTLPTSARTNTAHI 292
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 269 HTDHHP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
H HHP + LPT T SP K H P T+A T+++HI
Sbjct: 222 HCPHHP-VQTLPT-SARTNTAHISPYKHCPHHPVQTLPTSARTNTAHI 267
Score = 25.4 bits (53), Expect = 8.9
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 269 HTDHHP*WRGLPT-IEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
H H P + LPT NTA SP K H P T+A T+++HI
Sbjct: 197 HCPHQP-VQTLPTSARANTAH--ISPYKHCPHHPVQTLPTSARTNTAHI 242
>SB_23044| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2162
Score = 29.1 bits (62), Expect = 0.72
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = -3
Query: 225 GKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCD 91
G+HC + I C G GA GN+ E C D
Sbjct: 724 GRHCEKDIDECSLGYCKNGATCTNTPGNYSCQCTEFTNGTNCELD 768
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 224 GNTARGASSPAKPALHIPEPLSTT 153
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 1.3
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 224 GNTARGASSPAKPALHIPEPLSTT 153
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_4846| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 684
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -1
Query: 269 HTDHHP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
H HHP + LPT T SP K H P T+A T+++HI
Sbjct: 366 HCPHHP-VQTLPT-SSRTNTAHISPYKHCPHQPVQTLPTSARTNTAHI 411
Score = 25.4 bits (53), Expect = 8.9
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -1
Query: 269 HTDHHP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
H H P + LPT T SP K H P T+A T+++HI
Sbjct: 316 HCSHQP-VQTLPT-SARTNTAHISPYKHCPHHPVQTLPTSARTNTAHI 361
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 27.9 bits (59), Expect = 1.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -1
Query: 260 HHP*WRGLPTIEGNTARGASSPAKPA 183
H P R P +EG +++G SP +P+
Sbjct: 981 HEPPKRVTPVVEGRSSKGDDSPGRPS 1006
>SB_2329| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1181
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/72 (26%), Positives = 33/72 (45%)
Frame = -3
Query: 288 HKSPSVPYRPSPLMAGPSHDRGKHCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKL 109
++S +P R S M G HD ++ I+ AGL YY+ + + +L+K
Sbjct: 326 NQSVVIPRRSSKKMEG-LHDMNQYLNTEIVCTLAGLGCAEGTEYYKSPDCLESLKDLIKF 384
Query: 108 VRCRCDKMKIKR 73
+R +I+R
Sbjct: 385 LRRDDSTCEIRR 396
>SB_47339| Best HMM Match : Rubredoxin (HMM E-Value=0.76)
Length = 730
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -2
Query: 274 CPIPTITPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTR 146
C +P + PD P + HH RS+ C + +H ++ +R
Sbjct: 293 CSLPVVGPDDQVQPWDWRDCPDYHHYFRSQTC-WEAHRVVKSR 334
>SB_23698| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 964
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = -2
Query: 274 CPIPTITPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTR 146
C +P + PD P + HH RS+ C + +H ++ +R
Sbjct: 531 CSLPVVGPDDQVQPWDWRDCPDYHHYFRSQTC-WEAHRVVKSR 572
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 27.9 bits (59), Expect = 1.7
Identities = 12/27 (44%), Positives = 19/27 (70%)
Frame = +1
Query: 139 EVAALVVDNGSGMCKAGFAGDDAPRAV 219
++A LV+D G+ K GFA + APR++
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI 258
>SB_22432| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 27.5 bits (58), Expect = 2.2
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 239 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSH 129
L IE + A++P P + +P+ + +AAT +SH
Sbjct: 222 LRRIERSNIPQATAPGTPGVPVPQAVHGVSAATQASH 258
>SB_16360| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 27.5 bits (58), Expect = 2.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = -2
Query: 271 PIPTITPDGGAFPRSRETLREEHHLLRSRPCTYRSHCLLPTRQLL 137
P P + P+ G FP + +E H L C Y + LLP Q++
Sbjct: 92 PSPDVVPNAGQFPNAEG--QEVHFLCTGPMCRY-AEDLLPLLQIM 133
>SB_18995| Best HMM Match : rve (HMM E-Value=0.0012)
Length = 1225
Score = 27.5 bits (58), Expect = 2.2
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -2
Query: 244 GAFPRSRETLREEHHLLRSRPCTYRS 167
G +P S++T R E + +RPCT S
Sbjct: 832 GCYPWSKQTFRHEGPPISARPCTAMS 857
>SB_28400| Best HMM Match : PMSR (HMM E-Value=1.7e-24)
Length = 766
Score = 27.1 bits (57), Expect = 2.9
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +1
Query: 145 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 249
+ +++D GS KAGFA ++A + + S++G H
Sbjct: 483 SVIIIDLGSSSVKAGFAQEEA-QVFYISLIGILEH 516
>SB_19475| Best HMM Match : C_tripleX (HMM E-Value=0.1)
Length = 530
Score = 27.1 bits (57), Expect = 2.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 297 ISIHKSPSVPYRPSPLMAGPSH 232
I++H P+VP P+P A P H
Sbjct: 410 IAVHVPPAVPQHPAPPPAVPQH 431
>SB_146| Best HMM Match : DUF836 (HMM E-Value=1.5)
Length = 554
Score = 27.1 bits (57), Expect = 2.9
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 218 CFPRSWEGPAIRGDGRYGTEGLLCXEM 298
C PR W P + +GR T L C +M
Sbjct: 274 CAPRQWLEPTEKREGREVTNKLRCRDM 300
>SB_20183| Best HMM Match : Astacin (HMM E-Value=2.2e-06)
Length = 230
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP 253
LIS+ SPS PY+P P
Sbjct: 87 LISLQSSPSYPYKPLP 102
>SB_3900| Best HMM Match : DUF1070 (HMM E-Value=1)
Length = 500
Score = 26.6 bits (56), Expect = 3.9
Identities = 13/34 (38%), Positives = 16/34 (47%), Gaps = 4/34 (11%)
Frame = -3
Query: 288 HKSPSVPYRPS----PLMAGPSHDRGKHCARSII 199
HK P +RP P +G R KHCA S +
Sbjct: 208 HKKPGYEWRPEAAWYPKNSGRLGQRAKHCAESAV 241
>SB_14751| Best HMM Match : DUF1602 (HMM E-Value=1.9)
Length = 334
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP 253
LIS+ SPS PY+P P
Sbjct: 64 LISLQSSPSYPYKPLP 79
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP 253
L+S+ SPS PY+P P
Sbjct: 152 LVSLQASPSYPYKPLP 167
>SB_12742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1077
Score = 26.6 bits (56), Expect = 3.9
Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Frame = +1
Query: 124 KMCDEEVAALVVDNG-SGMCKAGFAGD 201
++CD++ + +N MCKAG+ GD
Sbjct: 487 RLCDKDAVCRLENNAIKCMCKAGYTGD 513
>SB_9222| Best HMM Match : 7tm_1 (HMM E-Value=4.1e-06)
Length = 425
Score = 26.6 bits (56), Expect = 3.9
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -3
Query: 189 AGLAHTGAIVYYQRGNFFVAHLELVKLVRC 100
+G +T A VY+QRGN + H + V + C
Sbjct: 358 SGRGNTWA-VYFQRGNTWTVHFQRVNTMGC 386
>SB_56087| Best HMM Match : Extensin_2 (HMM E-Value=0.29)
Length = 403
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP-LMAGPS 235
L+S+ SPS PY+P P + PS
Sbjct: 80 LVSLQASPSYPYKPFPRITTSPS 102
Score = 26.2 bits (55), Expect = 5.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP 253
LIS+ SPS PY+P P
Sbjct: 126 LISLQASPSYPYKPLP 141
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP 253
L+S+ SPS PY+P P
Sbjct: 233 LVSLQASPSYPYKPLP 248
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP 253
L+S+ SPS PY+P P
Sbjct: 336 LVSLQASPSYPYKPLP 351
>SB_34833| Best HMM Match : E6 (HMM E-Value=7.2)
Length = 135
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = -2
Query: 199 LLRSRPCTYRSHCLLP 152
L R R C YRSH LLP
Sbjct: 52 LFRGRYCQYRSHNLLP 67
>SB_26308| Best HMM Match : Drf_FH1 (HMM E-Value=1.6)
Length = 184
Score = 26.2 bits (55), Expect = 5.1
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Frame = -1
Query: 245 RGLPTIE----GNTARGASSPAKPALHIPEPLSTTNAATSSS 132
RG P I NT+RG PA P + PL+ +S+S
Sbjct: 119 RGTPPIREDGYANTSRGDRGPASPHSFLSSPLNLRKQPSSAS 160
>SB_14615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 227 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 135
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_56014| Best HMM Match : 7tm_1 (HMM E-Value=1.6e-08)
Length = 300
Score = 26.2 bits (55), Expect = 5.1
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Frame = +2
Query: 56 LAVTAGRLIFILSHLHLTNF-TNSRCATKKLPRW**TMAPVC-ARPASQEMMLL 211
LAV+A R+I + HL T+ TN+R + W T+ C + AS +ML+
Sbjct: 117 LAVSADRVIALYLHLRYTSIVTNNRVVKLHIIIWTVTVPFTCLSLLASHSVMLI 170
>SB_35722| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 171
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 227 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 135
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 26.2 bits (55), Expect = 5.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -2
Query: 244 GAFPRSRETLREEHHLLRSRPCTYRS 167
G +P S++T R E +RPCT S
Sbjct: 1256 GCYPWSKQTFRHEGPTHTARPCTAMS 1281
>SB_21813| Best HMM Match : CutA1 (HMM E-Value=8.3)
Length = 200
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = -1
Query: 227 EGNTARGASSP-AKPALHIPEPLSTTNAATSS 135
+G T R SS A+P L++P P S T ++ SS
Sbjct: 79 DGGTNRTRSSASAEPTLNLPSPPSKTPSSASS 110
>SB_51102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 357
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 44 CFSRLAVTAGRLIFILSHLHLTNFTNSRCAT 136
C++ L+V+ +F +SH N +SRC T
Sbjct: 122 CYTLLSVSLTCFVFSVSHNRFGNTHSSRCHT 152
>SB_53826| Best HMM Match : HipA_C (HMM E-Value=2.7)
Length = 160
Score = 25.8 bits (54), Expect = 6.7
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -3
Query: 204 IISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCDKMK-IKRPAVTANREKQ 43
+++ AG+ H G I + + GN+ V E C+ + K I+ P + AN KQ
Sbjct: 51 VLALVAGVLHLGNISFREDGNYAVPLDE-----ECKAKQEKIIRNPPLLANIHKQ 100
>SB_24332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP 253
L+S+ SPS PY+P P
Sbjct: 102 LVSLQASPSYPYKPFP 117
>SB_10311| Best HMM Match : S-antigen (HMM E-Value=0.73)
Length = 617
Score = 25.8 bits (54), Expect = 6.7
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -3
Query: 297 ISIHKSPSVPYRPSPLMAGPSHDRG 223
+S K+P+ +PSP GPS RG
Sbjct: 373 VSPSKTPAARGKPSPARGGPSPARG 397
>SB_10020| Best HMM Match : Extensin_2 (HMM E-Value=0.88)
Length = 379
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP 253
L+S+ SPS PY+P P
Sbjct: 61 LVSLQASPSYPYKPLP 76
Score = 25.8 bits (54), Expect = 6.7
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP 253
L+S+ SPS PY+P P
Sbjct: 234 LVSLQASPSYPYKPLP 249
Score = 25.4 bits (53), Expect = 8.9
Identities = 10/23 (43%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = -3
Query: 300 LISIHKSPSVPYRPSP-LMAGPS 235
L+S+ PS PY+P P ++ PS
Sbjct: 211 LVSLQAPPSYPYKPLPRILTSPS 233
>SB_47153| Best HMM Match : CCG (HMM E-Value=3.4)
Length = 328
Score = 25.4 bits (53), Expect = 8.9
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 239 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATS 138
LP + +SP PA P P TT + TS
Sbjct: 22 LPDVHSPHFNSVASPPNPASLNPSPTQTTGSPTS 55
>SB_34040| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 327
Score = 25.4 bits (53), Expect = 8.9
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 5 HCVEQGHRPAIGICFSRLAVTAGRL 79
HC HRP + I +RL + GRL
Sbjct: 147 HCAADIHRPVLIIWTARLMLIKGRL 171
>SB_15927| Best HMM Match : fn2 (HMM E-Value=3.9)
Length = 343
Score = 25.4 bits (53), Expect = 8.9
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 269 HTDHHP*WRGLPT-IEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
H H P + LPT NTA SP K H P T+A T+++HI
Sbjct: 96 HCPHQP-VQTLPTSARANTAH--ISPYKHCPHQPVQTLPTSARTNTAHI 141
Score = 25.4 bits (53), Expect = 8.9
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 269 HTDHHP*WRGLPTIEG-NTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
H H P + LPT NTA SP K H P T+A T+++HI
Sbjct: 196 HCPHQP-VQTLPTSASVNTAH--ISPCKHCPHQPVQTLPTSARTNTAHI 241
>SB_43395| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 25.4 bits (53), Expect = 8.9
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -1
Query: 239 LPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
L T++ S P LHIP PL T T SHI
Sbjct: 554 LGTLQQTVGSTGSLPDLTNLHIPSPLQTP-IDTEDSHI 590
>SB_4354| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 25.4 bits (53), Expect = 8.9
Identities = 7/17 (41%), Positives = 14/17 (82%)
Frame = -3
Query: 138 FVAHLELVKLVRCRCDK 88
+V+H ++ +L+ CRC+K
Sbjct: 19 YVSHEQVTRLIGCRCEK 35
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,649,457
Number of Sequences: 59808
Number of extensions: 224596
Number of successful extensions: 629
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 629
length of database: 16,821,457
effective HSP length: 71
effective length of database: 12,575,089
effective search space used: 364677581
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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