Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1440
(302 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 1.9
AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein. 21 2.5
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 2.5
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 21 2.5
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 21 4.4
AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein. 20 5.8
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 20 5.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 5.8
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 20 7.7
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 20 7.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 20 7.7
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 20 7.7
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 20 7.7
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 21.8 bits (44), Expect = 1.9
Identities = 8/23 (34%), Positives = 12/23 (52%)
Frame = -3
Query: 297 ISIHKSPSVPYRPSPLMAGPSHD 229
I++H +VP + GP HD
Sbjct: 522 IAVHSEQNVPGAVVRVFLGPKHD 544
>AF023619-1|AAC39040.1| 355|Apis mellifera arginine kinase protein.
Length = 355
Score = 21.4 bits (43), Expect = 2.5
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 81 IKRPAVTANREKQIPIAGR 25
IK P + ANR K IAG+
Sbjct: 284 IKLPKLAANRAKLEEIAGK 302
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 2.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 267 YRPSPLMAGP 238
YRP P M+GP
Sbjct: 553 YRPKPRMSGP 562
Score = 21.0 bits (42), Expect = 3.3
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -3
Query: 270 PYRPSPLMAG 241
P+ PSP MAG
Sbjct: 1168 PFMPSPFMAG 1177
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 21.4 bits (43), Expect = 2.5
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 172 GMCKAGFAGD 201
GMCK G +GD
Sbjct: 130 GMCKEGISGD 139
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 20.6 bits (41), Expect = 4.4
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = +1
Query: 43 LFLTVSSHCRAFNFHLV 93
L + V+S C+AF +H V
Sbjct: 284 LRMGVASFCKAFPWHFV 300
>AY545000-1|AAS50159.2| 126|Apis mellifera profilin protein.
Length = 126
Score = 20.2 bits (40), Expect = 5.8
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +1
Query: 22 TPAGNRYLFLT 54
T AGNRY++L+
Sbjct: 62 TLAGNRYIYLS 72
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 20.2 bits (40), Expect = 5.8
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 291 IHKSPSVPYRPSPLMAGPSHD 229
I K PS+P P P+ + D
Sbjct: 645 IRKMPSMPLLPRPISCHTTPD 665
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 5.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -3
Query: 204 IISCEAGLAHTGAIVY 157
+I AGL TGA VY
Sbjct: 1258 VIPTPAGLKTTGAAVY 1273
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 19.8 bits (39), Expect = 7.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 242 PAIRGDGRYGTEGLL 286
P ++ GRY TEG L
Sbjct: 189 PLLKVWGRYTTEGFL 203
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 19.8 bits (39), Expect = 7.7
Identities = 10/43 (23%), Positives = 15/43 (34%)
Frame = -1
Query: 287 IRVLLSHTDHHP*WRGLPTIEGNTARGASSPAKPALHIPEPLS 159
+ +L+ T H P W + A K +P P S
Sbjct: 16 LTILIFVTSHRPAWWFWTATSHEASAPAEGKFKTVSKVPGPFS 58
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 19.8 bits (39), Expect = 7.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 231 DRGKHCARSIISCEAGLA 178
D G+H ++ EAGLA
Sbjct: 130 DPGEHNGDTVTDVEAGLA 147
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 19.8 bits (39), Expect = 7.7
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +2
Query: 242 PAIRGDGRYGTEGLL 286
P ++ GRY TEG L
Sbjct: 189 PLLKVWGRYTTEGFL 203
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 19.8 bits (39), Expect = 7.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = -3
Query: 231 DRGKHCARSIISCEAGLA 178
D G+H ++ EAGLA
Sbjct: 125 DPGEHNGDTVTDVEAGLA 142
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,453
Number of Sequences: 438
Number of extensions: 1778
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used: 6368931
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)
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