Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1440
(302 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 75 9e-15
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 73 3e-14
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 73 3e-14
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 73 3e-14
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 73 3e-14
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 73 3e-14
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 73 3e-14
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 71 1e-13
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 71 1e-13
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 71 1e-13
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 57 2e-09
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 57 3e-09
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 52 6e-08
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 46 6e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 43 5e-05
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 36 0.005
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 33 0.048
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 30 0.26
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 29 0.79
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 1.8
At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin ... 27 3.2
At3g48860.2 68416.m05337 expressed protein 26 4.2
At3g48860.1 68416.m05336 expressed protein 26 4.2
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 26 4.2
At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identi... 26 4.2
At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identi... 26 4.2
At5g07000.1 68418.m00793 sulfotransferase family protein similar... 25 7.4
At1g49840.1 68414.m05588 expressed protein contains Pfam profile... 25 7.4
At1g48040.1 68414.m05354 protein phosphatase 2C-related / PP2C-r... 25 7.4
At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related ... 25 7.4
At5g54610.1 68418.m06800 ankyrin repeat family protein contains ... 25 9.7
At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 25 9.7
At4g27010.1 68417.m03885 expressed protein ; expression support... 25 9.7
At3g24540.1 68416.m03082 protein kinase family protein contains ... 25 9.7
At3g03720.1 68416.m00377 amino acid permease family protein simi... 25 9.7
At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putati... 25 9.7
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 74.9 bits (176), Expect = 9e-15
Identities = 34/55 (61%), Positives = 40/55 (72%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVWDRRTLMYXDE 300
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+G D + DE
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEKDTFVGDE 60
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 73.3 bits (172), Expect = 3e-14
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ +GVMVGMGQKD+YV
Sbjct: 38 GRPRHTGVMVGMGQKDAYV 56
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 73.3 bits (172), Expect = 3e-14
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ +GVMVGMGQKD+YV
Sbjct: 38 GRPRHTGVMVGMGQKDAYV 56
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 73.3 bits (172), Expect = 3e-14
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ +GVMVGMGQKD+YV
Sbjct: 38 GRPRHTGVMVGMGQKDAYV 56
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 73.3 bits (172), Expect = 3e-14
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ +GVMVGMGQKD+YV
Sbjct: 38 GRPRHTGVMVGMGQKDAYV 56
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 73.3 bits (172), Expect = 3e-14
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ +GVMVGMGQKD+YV
Sbjct: 38 GRPRHTGVMVGMGQKDAYV 56
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 73.3 bits (172), Expect = 3e-14
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH G
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG 44
Score = 31.5 bits (68), Expect = 0.11
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ +GVMVGMGQKD+YV
Sbjct: 38 GRPRHTGVMVGMGQKDAYV 56
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 71.3 bits (167), Expect = 1e-13
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHG 44
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ GVMVGM QKD+YV
Sbjct: 38 GRPRHHGVMVGMNQKDAYV 56
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 71.3 bits (167), Expect = 1e-13
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHG 44
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ GVMVGM QKD+YV
Sbjct: 38 GRPRHHGVMVGMNQKDAYV 56
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 71.3 bits (167), Expect = 1e-13
Identities = 29/40 (72%), Positives = 35/40 (87%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 255
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH G
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHG 44
Score = 28.3 bits (60), Expect = 1.0
Identities = 12/19 (63%), Positives = 14/19 (73%)
Frame = +3
Query: 234 GKAPPSGVMVGMGQKDSYV 290
G+ GVMVGM QKD+YV
Sbjct: 38 GRPRHHGVMVGMNQKDAYV 56
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 57.2 bits (132), Expect = 2e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 237
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 56.8 bits (131), Expect = 3e-09
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 237
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 52.4 bits (120), Expect = 6e-08
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 246
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 45.6 bits (103), Expect = 6e-06
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 243
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 42.7 bits (96), Expect = 5e-05
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 252
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 35.9 bits (79), Expect = 0.005
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +1
Query: 148 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 234
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 32.7 bits (71), Expect = 0.048
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 243
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 30.3 bits (65), Expect = 0.26
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = -1
Query: 245 RGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 135
RGL +G T+ +SSPA+P + +P +ST + TS+
Sbjct: 298 RGLIVYQGATS--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 28.7 bits (61), Expect = 0.79
Identities = 21/51 (41%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +1
Query: 148 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQG*WSVWDRRTLMYXD 297
ALVVD GS KAG A D +P + PS + R G S D T ++ D
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKRMVDDGSSSA-DNPTTVFED 52
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 1.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 248 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 126
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At2g41890.1 68415.m05181 curculin-like (mannose-binding) lectin
family protein / PAN domain-containing protein contains
Pfam profiles: PF01453 lectin (probable mannose
binding), PF00024 PAN domain
Length = 764
Score = 26.6 bits (56), Expect = 3.2
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = +1
Query: 136 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG*WSVW 270
E++ A + + G G+C A +D + V I GR +G S W
Sbjct: 632 EDLEAKLTEYGFGLCAADKDVEDFGKTVLALITGRYEPEGVVSEW 676
>At3g48860.2 68416.m05337 expressed protein
Length = 577
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 227 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 129
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g48860.1 68416.m05336 expressed protein
Length = 494
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = -1
Query: 227 EGNTARGASSPAKPALHIPEPLSTTNAATSSSH 129
E + R AS+ KPA H P +S+T + +S+ +
Sbjct: 82 EDLSLRFASASLKPARHAPSSISSTGSNSSNGN 114
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 26.2 bits (55), Expect = 4.2
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Frame = -1
Query: 248 WRGLPTIEGNTARGASSPAKPA--LHIPEPL 162
WR + T G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
>At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 522
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = -3
Query: 252 LMAGPSHDRGK----HCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCDKM 85
+ A +D GK C+R + CE +G Y N AH E V++ R +
Sbjct: 205 VFAHAGYDLGKKAPGRCSRYVPGCEDREGQSGKEAYLVSHNLLNAHAEAVEVFRQKVKGG 264
Query: 84 KI 79
KI
Sbjct: 265 KI 266
>At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 524
Score = 26.2 bits (55), Expect = 4.2
Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Frame = -3
Query: 252 LMAGPSHDRGK----HCARSIISCEAGLAHTGAIVYYQRGNFFVAHLELVKLVRCRCDKM 85
+ A +D GK C+R + CE +G Y N AH E V++ R +
Sbjct: 207 VFAHAGYDLGKKAPGRCSRYVPGCEDREGQSGKEAYLVSHNLLNAHAEAVEVFRQKVKGG 266
Query: 84 KI 79
KI
Sbjct: 267 KI 268
>At5g07000.1 68418.m00793 sulfotransferase family protein similar to
steroid sulfotransferase 3 [Brassica napus] GI:3420008,
steroid sulfotransferase 1 [Brassica napus] GI:3420004;
contains Pfam profile PF00685: Sulfotransferase domain
Length = 347
Score = 25.4 bits (53), Expect = 7.4
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +1
Query: 34 NRYLFLTVSSHCRAFNFHLVTPTSY*FH*FKMCDEEVAALVVDNGSGMCKA 186
NRYL+L C+A + TS+ H + D+ V A + +G+ KA
Sbjct: 47 NRYLYLFQGFRCQAKEIQAI--TSFQKHFQSLPDDVVLATIPKSGTTWLKA 95
>At1g49840.1 68414.m05588 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 494
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -1
Query: 248 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSS 135
WR P + +TA+G P + AL +P +T S
Sbjct: 262 WRHTPWLGSHTAKGPVRPLRRALQGLDPRTTATMFAES 299
>At1g48040.1 68414.m05354 protein phosphatase 2C-related /
PP2C-related similar to protein phosphatase-2C
GB:AAC36698 GI:3643085 from [Mesembryanthemum
crystallinum]
Length = 377
Score = 25.4 bits (53), Expect = 7.4
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 268 IPTITPDGGAFPRSRETLREEH 203
IPTI A RSRET+ +EH
Sbjct: 68 IPTIRSGSFADIRSRETMEDEH 89
>At1g17450.1 68414.m02137 ATP phosphoribosyltransferase -related
contains weak similarity to Swiss-Prot:P10366 ATP
phosphoribosyltransferase [Escherichia coli]
Length = 1402
Score = 25.4 bits (53), Expect = 7.4
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -1
Query: 197 PAKPALHIPEPLSTTNA 147
PAKP +H P+P++ N+
Sbjct: 159 PAKPKVHQPQPITVENS 175
>At5g54610.1 68418.m06800 ankyrin repeat family protein contains
Pfam domain, PF00023: Ankyrin repeat
Length = 426
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = -3
Query: 186 GLAHTGAIVYYQRGNFFVAHLELVKLVRCRCDKMKIKRP 70
GL+ I+Y G F+ +L ++ + RC +MK+++P
Sbjct: 377 GLSFFFLIIY--EGGLFLVYLLVLYVKWKRCTQMKVRKP 413
>At5g11080.1 68418.m01294 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 352
Score = 25.0 bits (52), Expect = 9.7
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 127 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 252
+C + L + +G+ G DD RAVF S G+ R Q
Sbjct: 222 LCHLGSSILALGHGTSRISMGETQDDVGRAVFISPTGQNRLQ 263
>At4g27010.1 68417.m03885 expressed protein ; expression supported by
MPSS
Length = 2535
Score = 25.0 bits (52), Expect = 9.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 47 FSRLAVTAGRLIFILSHLHLTNFTNSRC 130
FS ++T GRL+F H+ N S C
Sbjct: 1165 FSETSLTMGRLVFSEIDQHILNLLVSTC 1192
>At3g24540.1 68416.m03082 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 509
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 218 TARGASSPAKPALHIPEPL 162
T ASSP P + +PEPL
Sbjct: 35 TMSSASSPPPPQVFVPEPL 53
>At3g03720.1 68416.m00377 amino acid permease family protein similar
to cationic amino acid transporter-1 [Rattus norvegicus]
GI:1589917; contains Pfam profile PF00324: Amino acid
permease
Length = 600
Score = 25.0 bits (52), Expect = 9.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +1
Query: 151 LVVDNGSGMCKAGFAGDDAPRAVFP 225
++V G CK G+ G D P FP
Sbjct: 198 IIVVGGYLACKTGWVGYDLPSGYFP 222
>At2g22450.1 68415.m02662 riboflavin biosynthesis protein, putative
similar to SP|P50855 Riboflavin biosynthesis protein
ribA [Includes: GTP cyclohydrolase II (EC 3.5.4.25);
3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP
synthase)] {Actinobacillus pleuropneumoniae}; contains
Pfam profiles PF00925: GTP cyclohydrolase II, PF00926:
3,4-dihydroxy-2-butanone 4-phosphate synthase
Length = 476
Score = 25.0 bits (52), Expect = 9.7
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 139 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGR 240
E A VV +G+G+ G+D R P +V R
Sbjct: 146 EAMAFVVKHGTGIVCVSMKGEDLERLELPLMVTR 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,121,049
Number of Sequences: 28952
Number of extensions: 140920
Number of successful extensions: 422
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 409
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 12,070,560
effective HSP length: 70
effective length of database: 10,043,920
effective search space used: 301317600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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