Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1439
(563 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 83 2e-18
EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate 1-deca... 25 0.59
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 22 4.2
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.3
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.3
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.3
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.3
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 21 7.3
AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory recept... 21 7.3
AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein pr... 21 7.3
AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory recept... 21 9.6
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 21 9.6
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 83.0 bits (196), Expect = 2e-18
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = -2
Query: 247 FARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNFSKV 68
F ++ VK+LGH++T G+ DPEK+SA+ P KH+R FL C+++RKF +S
Sbjct: 496 FIQKEVKFLGHILTINGIKADPEKISAIRNFPVPQKTKHVRAFLGLCNFYRKFCARYSAA 555
Query: 67 AEPLTRLTRKNQIWIWGAEQ 8
+ L +L RK + W WG +
Sbjct: 556 TQDLNKLLRKGEKWRWGRNE 575
Score = 44.8 bits (101), Expect = 5e-07
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = -3
Query: 474 FRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLETVF 295
+ ++ +PFGL+ A +F R +D + + V + +DDL + S+ HL+ L VF
Sbjct: 422 YTYQVLPFGLKTAVGSFSRAMDVVLGTEVREFV--VNYIDDLLVASETLNEHLEHLRQVF 479
Query: 294 NRLAEFNLHLNRESA 250
+L + + +N E +
Sbjct: 480 EKLKQARMTINLEKS 494
>EU019709-1|ABU25221.1| 540|Tribolium castaneum aspartate
1-decarboxylase protein.
Length = 540
Score = 24.6 bits (51), Expect = 0.59
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = -3
Query: 459 MPFGLRNAPATFQRLIDSL 403
M FG+R+AP+T + L++ L
Sbjct: 101 MDFGVRSAPSTHEELLEVL 119
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 21.8 bits (44), Expect = 4.2
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +3
Query: 117 KNVLRCLRLLGSFISSTALTFSGSVETPSCVMTCP 221
KNVL+C+ SF S A+T + E C + P
Sbjct: 375 KNVLKCVWCKQSFPSLAAMT-THMKEAKHCGVNVP 408
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.0 bits (42), Expect = 7.3
Identities = 5/18 (27%), Positives = 9/18 (50%)
Frame = -1
Query: 509 RQXCLLSVRWVPFVSKEC 456
+ C + + W PF + C
Sbjct: 125 KSTCKMDITWFPFDDQHC 142
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.0 bits (42), Expect = 7.3
Identities = 5/18 (27%), Positives = 9/18 (50%)
Frame = -1
Query: 509 RQXCLLSVRWVPFVSKEC 456
+ C + + W PF + C
Sbjct: 125 KSTCKMDITWFPFDDQHC 142
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.0 bits (42), Expect = 7.3
Identities = 5/18 (27%), Positives = 9/18 (50%)
Frame = -1
Query: 509 RQXCLLSVRWVPFVSKEC 456
+ C + + W PF + C
Sbjct: 125 KSTCKMDITWFPFDDQHC 142
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.0 bits (42), Expect = 7.3
Identities = 5/18 (27%), Positives = 9/18 (50%)
Frame = -1
Query: 509 RQXCLLSVRWVPFVSKEC 456
+ C + + W PF + C
Sbjct: 125 KSTCKIDITWFPFDDQHC 142
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.0 bits (42), Expect = 7.3
Identities = 5/18 (27%), Positives = 9/18 (50%)
Frame = -1
Query: 509 RQXCLLSVRWVPFVSKEC 456
+ C + + W PF + C
Sbjct: 125 KSTCKMDITWFPFDDQHC 142
>AM292372-1|CAL23184.2| 771|Tribolium castaneum gustatory receptor
candidate 51 protein.
Length = 771
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +3
Query: 75 EKFGMNFRNQEHVCK 119
E+F +NFRN + + K
Sbjct: 709 EQFTLNFRNSDELIK 723
>AJ606487-1|CAE55183.1| 203|Tribolium castaneum Giant protein
protein.
Length = 203
Score = 21.0 bits (42), Expect = 7.3
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -2
Query: 550 DPSYWQLKR 524
DPSYW+ +R
Sbjct: 135 DPSYWEKRR 143
>AM292336-1|CAL23148.2| 455|Tribolium castaneum gustatory receptor
candidate 15 protein.
Length = 455
Score = 20.6 bits (41), Expect = 9.6
Identities = 8/25 (32%), Positives = 13/25 (52%)
Frame = -3
Query: 321 HLQDLETVFNRLAEFNLHLNRESAF 247
HL ++ V L + +L+LN F
Sbjct: 60 HLSGIQLVVRNLLDISLYLNAYHVF 84
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 20.6 bits (41), Expect = 9.6
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = +3
Query: 114 CKNVLRCLRLLGSFISSTALTFSG 185
C+N CL L+GS+ F G
Sbjct: 193 CQNGGTCLDLIGSYSCKCPKGFQG 216
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,699
Number of Sequences: 336
Number of extensions: 2852
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13890653
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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