Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1439
(563 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 73 3e-14
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 73 3e-14
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 73 3e-14
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 73 3e-14
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 73 3e-14
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 73 3e-14
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 73 3e-14
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 73 3e-14
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 73 3e-14
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 73 3e-14
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 73 3e-14
SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces... 29 0.47
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 28 0.82
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 27 2.5
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 26 3.3
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 26 4.4
SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex... 26 4.4
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 25 5.8
SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces po... 25 5.8
SPBC800.11 |||inosine-uridine preferring nucleoside hydrolase |S... 25 5.8
SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase |Schizosac... 25 5.8
SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual 25 7.7
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 58.4 bits (135), Expect = 7e-10
Identities = 34/113 (30%), Positives = 54/113 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ A V +DD+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 58.4 bits (135), Expect = 7e-10
Identities = 34/113 (30%), Positives = 54/113 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ A V +DD+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 54.8 bits (126), Expect = 8e-09
Identities = 31/113 (27%), Positives = 56/113 (49%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ ++ ++ +D++
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTI--LGEVKESHVVCYMDNIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 58.4 bits (135), Expect = 7e-10
Identities = 34/113 (30%), Positives = 54/113 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ A V +DD+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 54.8 bits (126), Expect = 8e-09
Identities = 31/113 (27%), Positives = 56/113 (49%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ ++ ++ +D++
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTI--LGEVKESHVVCYMDNIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 58.4 bits (135), Expect = 7e-10
Identities = 34/113 (30%), Positives = 54/113 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ A V +DD+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 58.4 bits (135), Expect = 7e-10
Identities = 34/113 (30%), Positives = 54/113 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ A V +DD+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 58.4 bits (135), Expect = 7e-10
Identities = 34/113 (30%), Positives = 54/113 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ A V +DD+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 54.8 bits (126), Expect = 8e-09
Identities = 31/113 (27%), Positives = 56/113 (49%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ ++ ++ +D++
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISIAPAHFQYFINTI--LGEVKESHVVCYMDNIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 58.4 bits (135), Expect = 7e-10
Identities = 34/113 (30%), Positives = 54/113 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ A V +DD+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 72.9 bits (171), Expect = 3e-14
Identities = 32/87 (36%), Positives = 52/87 (59%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q +C F + VK++G+ I+++G + E + VL+ K+P N K LR FL + ++ RKFIP
Sbjct: 598 QAKCEFHQSQVKFIGYHISEKGFTPCQENIDKVLQWKQPKNRKELRQFLGSVNYLRKFIP 657
Query: 82 NFSKVAEPLTRLTRKNQIWIWGAEQVR 2
S++ PL L +K+ W W Q +
Sbjct: 658 KTSQLTHPLNNLLKKDVRWKWTPTQTQ 684
Score = 58.4 bits (135), Expect = 7e-10
Identities = 34/113 (30%), Positives = 54/113 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
VR+ D+ L F CP G F + MP+G+ APA FQ I+++ A V +DD+
Sbjct: 512 VRKGDEHKLAFRCPRGVFEYLVMPYGISTAPAHFQYFINTILGEAKESHVVC--YMDDIL 569
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
I S+ H++ ++ V +L NL +N+ G + +K F P
Sbjct: 570 IHSKSESEHVKHVKDVLQKLKNANLIINQAKCEFHQSQVKFIGYHISEKGFTP 622
>SPAC3F10.05c |mug113||DUF1766 family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 326
Score = 29.1 bits (62), Expect = 0.47
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 74 RKIWNEFSEPGACLQECPEVFKITRLFHFEHSAYL 178
R + F +PG + C FK+ RL H E + YL
Sbjct: 247 RSVLEIFPDPGKTSKPCQVSFKVERLVHKELNEYL 281
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 28.3 bits (60), Expect = 0.82
Identities = 19/83 (22%), Positives = 39/83 (46%)
Frame = +2
Query: 56 QGFGDFRKIWNEFSEPGACLQECPEVFKITRLFHFEHSAYLFRVGRNAFLCNDMPQVLDA 235
+GFG+ + + P C+++C + ++ F AY+ R + F+ D + +DA
Sbjct: 434 RGFGNRAAAYLKVMAPAECIRDCNKAIELDPNF---AKAYV-RKAQALFMLKDYNKCIDA 489
Query: 236 LSCENALSLLRCRLNSARRLKTV 304
C A + R N+ + L+ +
Sbjct: 490 --CNEASEVDRREPNTGKNLREI 510
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 26.6 bits (56), Expect = 2.5
Identities = 8/28 (28%), Positives = 19/28 (67%)
Frame = -2
Query: 163 LEMKEPSNLKHLRTFLQTCSWFRKFIPN 80
L++ +P +K + TF++ CS + + +P+
Sbjct: 358 LQVTDPVEVKQINTFIRECSIYWRILPS 385
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.2 bits (55), Expect = 3.3
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 214 VITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSW 101
VI +S +PE + A+L K+ SNL+ T Q CS+
Sbjct: 698 VIADHTLSENPEALKALLFSKDISNLE---TIQQNCSY 732
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 25.8 bits (54), Expect = 4.4
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = -1
Query: 557 ISRSVILATQTLGSATRQXCLLSVRWVPFVSKEC 456
+ R IL ++G R+ L++ WV F+ ++C
Sbjct: 939 LMRLSILDASSIGLIRRKMIQLAISWVGFIYEDC 972
>SPAC27E2.10c |rfc3|SPAPJ698.01c|DNA replication factor C complex
subunit Rfc3 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 342
Score = 25.8 bits (54), Expect = 4.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 229 KYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTC 107
K + HVI E + DP+ AVL + + +++ LQ C
Sbjct: 186 KTVDHVIQSEHCNIDPDAKMAVLRLSK-GDMRKALNILQAC 225
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 25.4 bits (53), Expect = 5.8
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = -1
Query: 338 LKGTSAIYRT*KQFSIVLRNSTYTSTERVHFRKTERQVLG 219
L G A+Y K+F V N+ TS + +HFR + VLG
Sbjct: 1081 LTGVLAVYIFKKKFYHVKFNAFGTSKQNLHFR--QHDVLG 1118
>SPCC23B6.03c |tel1||ATM checkpoint kinase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 2812
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 158 FEHSAYLFRVGRNAFLCNDMPQVLDA 235
FE +L R+ N +LC QVLDA
Sbjct: 1481 FERGHFLKRIAMNNYLCLYFWQVLDA 1506
>SPBC800.11 |||inosine-uridine preferring nucleoside hydrolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 389
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -2
Query: 88 IPNFSKVAEPLTRLTRKNQIW 26
IP+F+ A+PL R QIW
Sbjct: 81 IPSFAGAAQPLLRTNNTFQIW 101
>SPAC14C4.15c ||SPAPJ760.01c|dipeptidyl aminopeptidase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 853
Score = 25.4 bits (53), Expect = 5.8
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = +2
Query: 47 KACQGFGDFRKIWNEFSEPGACLQE 121
K G G IW FSEP C+ +
Sbjct: 238 KLVYGLGSNLFIWESFSEPPVCITD 262
>SPBC16D10.02 |trm11||tRNA |Schizosaccharomyces pombe|chr 2|||Manual
Length = 452
Score = 25.0 bits (52), Expect = 7.7
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = +1
Query: 430 SWRVAQSERHSFETKGTQRTDKRQXCLVA 516
S++ S + +FET GT+RT K Q +++
Sbjct: 128 SFKHNSSYKFTFETFGTRRTMKEQLSIIS 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,365,275
Number of Sequences: 5004
Number of extensions: 48035
Number of successful extensions: 158
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 158
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 238029836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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