Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1439
(563 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein ... 81 1e-15
AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed... 80 2e-15
X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein ( Dros... 77 2e-14
AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein. 77 2e-14
AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse tran... 74 1e-13
AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprot... 74 1e-13
AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein ... 74 2e-13
AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein ... 72 6e-13
X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein. 71 8e-13
X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein ( Dros... 70 3e-12
AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse tran... 70 3e-12
AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated po... 70 3e-12
AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed... 69 3e-12
AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein ... 69 6e-12
X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D. m... 68 1e-11
M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protei... 68 1e-11
EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein ... 68 1e-11
DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein ... 68 1e-11
DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein ... 68 1e-11
AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol pr... 68 1e-11
U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse transc... 66 2e-11
EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein ... 66 4e-11
AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse tran... 65 5e-11
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 65 7e-11
AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p pro... 65 7e-11
AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein. 64 1e-10
AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p pro... 62 7e-10
AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein ... 61 1e-09
AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed... 61 1e-09
X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein ( Dros... 59 5e-09
AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependen... 59 5e-09
X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein pr... 54 2e-07
X89022-1|CAA61431.1| 732|Drosophila melanogaster Tosca protein. 29 4.3
X89021-1|CAA61430.1| 732|Drosophila melanogaster Tosca protein. 29 4.3
AY051794-1|AAK93218.1| 732|Drosophila melanogaster LD31018p pro... 29 4.3
AE014134-2957|AAF53687.1| 732|Drosophila melanogaster CG10387-P... 29 4.3
BT029268-1|ABK30905.1| 461|Drosophila melanogaster IP07471p pro... 28 7.6
AE014296-1382|AAF50478.1| 283|Drosophila melanogaster CG13675-P... 28 7.6
>AF492764-2|AAM11674.1| 849|Drosophila melanogaster pol protein
protein.
Length = 849
Score = 81.0 bits (191), Expect = 1e-15
Identities = 34/76 (44%), Positives = 51/76 (67%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFI 86
Q +C F RQ +LGHVIT++G+ +PEK+ A+ + PS K ++ FL ++RKFI
Sbjct: 359 QLDKCEFLRQETTFLGHVITKDGIKPNPEKIKAIQDYPLPSKPKEIKAFLGITGYYRKFI 418
Query: 85 PNFSKVAEPLTRLTRK 38
PNFS +A+PLT+ +K
Sbjct: 419 PNFSDIAKPLTKCLKK 434
Score = 66.9 bits (156), Expect = 2e-11
Identities = 34/77 (44%), Positives = 46/77 (59%)
Frame = -3
Query: 495 FVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHL 316
F G + + RMPFGL+NAPATFQR +++L L L LDD+ + S + HL
Sbjct: 284 FSTKYGHYEYTRMPFGLKNAPATFQRCMNNL--LRPLLNKNCLVYLDDIIVFSTSLEEHL 341
Query: 315 QDLETVFNRLAEFNLHL 265
Q LE VF +L++ NL L
Sbjct: 342 QSLEAVFEKLSQANLKL 358
>AF364550-2|AAK52058.1| 1065|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1065
Score = 80.2 bits (189), Expect = 2e-15
Identities = 31/79 (39%), Positives = 53/79 (67%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFI 86
Q +C F ++ ++LGH+IT +G+ +P K+ AV+ P + K +++FL C ++RKFI
Sbjct: 385 QLDKCEFLKKETEFLGHIITTDGIKPNPAKIKAVVNFPIPKSTKEIKSFLGLCGFYRKFI 444
Query: 85 PNFSKVAEPLTRLTRKNQI 29
PNF+K+A+P+T +K I
Sbjct: 445 PNFAKIAKPMTLRLKKGSI 463
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/72 (45%), Positives = 43/72 (59%)
Frame = -3
Query: 480 GXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLET 301
G F + RMPFGL+NAPATFQR +++L A L L LDD+ + S + H+ L
Sbjct: 315 GHFEYTRMPFGLKNAPATFQRCMNNL--LADLIYKNCLVYLDDIIVYSTSLEEHIMSLRK 372
Query: 300 VFNRLAEFNLHL 265
VF +L E NL L
Sbjct: 373 VFLKLREANLKL 384
>X01472-2|CAA25702.1| 1058|Drosophila melanogaster protein (
Drosophila melanogastercopia-like element 17.6. ).
Length = 1058
Score = 77.0 bits (181), Expect = 2e-14
Identities = 30/77 (38%), Positives = 51/77 (66%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFI 86
Q +C F +Q +LGHV+T +G+ +PEK+ A+ + P+ K ++ FL ++RKFI
Sbjct: 397 QLDKCEFLKQETTFLGHVLTPDGIKPNPEKIEAIQKYPIPTKPKEIKAFLGLTGYYRKFI 456
Query: 85 PNFSKVAEPLTRLTRKN 35
PNF+ +A+P+T+ +KN
Sbjct: 457 PNFADIAKPMTKCLKKN 473
Score = 60.9 bits (141), Expect = 1e-09
Identities = 32/72 (44%), Positives = 42/72 (58%)
Frame = -3
Query: 480 GXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLET 301
G + + RMPFGL+NAPATFQR ++ + L L LDD+ + S HLQ L
Sbjct: 327 GHYEYLRMPFGLKNAPATFQRCMNDI--LRPLLNKHCLVYLDDIIVFSTSLDEHLQSLGL 384
Query: 300 VFNRLAEFNLHL 265
VF +LA+ NL L
Sbjct: 385 VFEKLAKANLKL 396
>AY180918-2|AAN87271.1| 1003|Drosophila melanogaster ORF2 protein.
Length = 1003
Score = 77.0 bits (181), Expect = 2e-14
Identities = 32/69 (46%), Positives = 51/69 (73%)
Frame = -2
Query: 247 FARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNFSKV 68
F V++LG+++T +G+ DP+KV A+ EM P+++K L+ FL S++RKFI +++KV
Sbjct: 319 FLDTQVEFLGYIVTADGIKADPKKVRAISEMPPPTSVKELKRFLGMTSYYRKFIQDYAKV 378
Query: 67 AEPLTRLTR 41
A+PLT LTR
Sbjct: 379 AKPLTNLTR 387
Score = 60.1 bits (139), Expect = 2e-09
Identities = 33/97 (34%), Positives = 53/97 (54%)
Frame = -3
Query: 528 NVRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDL 349
+++E D F G + F R+PFGL+NAPA FQR+ID + + V + +DD+
Sbjct: 227 HMKESDIPKTAFSTLNGKYEFLRLPFGLKNAPAIFQRMIDDILR-EHIGKVCYV-YIDDI 284
Query: 348 CIISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQD 238
+ S+ Y H ++L V L++ NL +N E + D
Sbjct: 285 IVFSEDYDTHWKNLRLVLASLSKANLQVNLEKSHFLD 321
>AF365402-2|AAK53386.1| 1059|Drosophila melanogaster reverse
transcriptase-like polymeraseprotein.
Length = 1059
Score = 74.1 bits (174), Expect = 1e-13
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFI 86
Q +C F ++ V++LG V++ +G+ T P KV A+ + P LK LR+FL ++R+FI
Sbjct: 385 QLDKCEFMKRKVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFI 444
Query: 85 PNFSKVAEPLTRLTR 41
PN++K+A+PL+ L R
Sbjct: 445 PNYAKLAKPLSSLLR 459
Score = 56.4 bits (130), Expect = 3e-08
Identities = 28/85 (32%), Positives = 48/85 (56%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
++E D F G + F R+PFGL+NAP+ FQR +D + + + + +DD+
Sbjct: 300 LKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALDDILH-EHIGKICFI-YIDDII 357
Query: 345 IISQGYQRHLQDLETVFNRLAEFNL 271
I S+ + H Q+L+T+F L + N+
Sbjct: 358 IFSKDDETHYQNLDTIFRTLQQANM 382
>AF315785-1|AAK01366.1| 437|Drosophila melanogaster pol polyprotein
protein.
Length = 437
Score = 74.1 bits (174), Expect = 1e-13
Identities = 31/75 (41%), Positives = 51/75 (68%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFI 86
Q +C F ++ V++LG V++ +G+ T P KV A+ + P LK LR+FL ++R+FI
Sbjct: 229 QLDKCEFMKRKVEFLGFVVSDKGIETSPTKVQAISDFPIPRTLKELRSFLGLSGYYRRFI 288
Query: 85 PNFSKVAEPLTRLTR 41
PN++K+A+PL+ L R
Sbjct: 289 PNYAKLAKPLSSLLR 303
Score = 49.6 bits (113), Expect = 3e-06
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCS-CAALQXVTILRXLDDL 349
++E D F G + F R+PFGL+NAP+ FQR +D S ++ V+ + L
Sbjct: 143 LKESDIEKTAFSINNGKYEFTRLPFGLKNAPSIFQRALDGYSSRTYRVRYVSFI--LTTS 200
Query: 348 CIISQGYQRHLQDLETVFNRLAEFNL 271
S+ + H Q+L+T+F L + N+
Sbjct: 201 SSFSKDDETHYQNLDTIFRTLQQANM 226
>AJ009736-2|CAA08807.1| 1150|Drosophila melanogaster Pol protein
protein.
Length = 1150
Score = 73.7 bits (173), Expect = 2e-13
Identities = 28/79 (35%), Positives = 48/79 (60%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFI 86
Q +C F ++ ++LGH++T G+ +P K A+ P K +++FL C ++RKFI
Sbjct: 470 QLDKCEFMKKETEFLGHIVTTNGIKPNPNKTKAITNFPLPKTPKQIKSFLGLCGFYRKFI 529
Query: 85 PNFSKVAEPLTRLTRKNQI 29
PNF+K+ +P+T +K I
Sbjct: 530 PNFAKIVKPMTLKLKKGAI 548
Score = 58.0 bits (134), Expect = 8e-09
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = -3
Query: 480 GXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLET 301
G + + RMPFGL+NAPATFQR +++L L L LDD+ + S + H+ L+
Sbjct: 400 GHYEYTRMPFGLKNAPATFQRCMNNLLE--DLIYKDCLVYLDDIIVYSTPLEEHILSLKK 457
Query: 300 VFNRLAEFNLHL 265
VF +L + NL L
Sbjct: 458 VFEKLRDANLKL 469
>AF222049-2|AAF36671.1| 1037|Drosophila melanogaster pol protein
protein.
Length = 1037
Score = 71.7 bits (168), Expect = 6e-13
Identities = 27/77 (35%), Positives = 51/77 (66%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFI 86
Q +C FAR+ +++LGH I EG+ +K+ A+ ++ P+N K +++FL + R++I
Sbjct: 322 QSDKCEFAREEIEFLGHTINSEGLKPSQKKIDAICKINLPTNQKQIKSFLGITGYLRRYI 381
Query: 85 PNFSKVAEPLTRLTRKN 35
++SK+A+PL + +KN
Sbjct: 382 KDYSKIAQPLIKYLKKN 398
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/102 (32%), Positives = 55/102 (53%)
Frame = -3
Query: 480 GXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLET 301
G + F RMPFGLRNAP+TFQRL++++ S Q + +DD+ I S+ H+ L
Sbjct: 252 GHYEFLRMPFGLRNAPSTFQRLMNNILSPYTGQFCIV--YMDDILIFSKNIGEHVNHLSC 309
Query: 300 VFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLPTLKR 175
+F+ L++ NL L + G +++ + P+ K+
Sbjct: 310 IFSCLSKANLKLQSDKCEFAREEIEFLGHTINSEGLKPSQKK 351
>X95908-1|CAA65152.1| 1494|Drosophila melanogaster orf protein.
Length = 1494
Score = 71.3 bits (167), Expect = 8e-13
Identities = 28/84 (33%), Positives = 59/84 (70%)
Frame = -2
Query: 256 ECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNF 77
+C F + S+KYLG +I ++G+ + + + A+ P+N+ +++FL CS+FR+FI +F
Sbjct: 905 KCEFMQSSIKYLGFIINKDGIMPNDKGIEAIKNFPIPNNVHTVQSFLGLCSYFRRFIKDF 964
Query: 76 SKVAEPLTRLTRKNQIWIWGAEQV 5
S++A+PL + +K++ + +G+E++
Sbjct: 965 SRLAKPLHDILKKDKPFKFGSEEM 988
Score = 67.3 bits (157), Expect = 1e-11
Identities = 32/106 (30%), Positives = 57/106 (53%)
Frame = -3
Query: 495 FVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHL 316
FV PLG + + RMPFGL+NAP+ FQR ++ + + ++ ++ +DD+ + ++ HL
Sbjct: 826 FVTPLGQYEWLRMPFGLKNAPSVFQRFVNKIFA-DMIRENKVVVYMDDILLATENINEHL 884
Query: 315 QDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLPTLK 178
+ L+ +F RL E L L + + G ++K +P K
Sbjct: 885 ETLKEIFKRLVENKLELRIDKCEFMQSSIKYLGFIINKDGIMPNDK 930
>X03431-2|CAB57796.1| 1059|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 1059
Score = 69.7 bits (163), Expect = 3e-12
Identities = 27/76 (35%), Positives = 48/76 (63%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFI 86
Q +C F ++ +LGH++T +G+ +P KV A++ P+ K +R FL ++RKFI
Sbjct: 396 QLDKCEFLKKEANFLGHIVTPDGIKPNPIKVKAIVSYPIPTKDKEIRAFLGLTGYYRKFI 455
Query: 85 PNFSKVAEPLTRLTRK 38
PN++ +A+P+T +K
Sbjct: 456 PNYADIAKPMTSCLKK 471
Score = 61.7 bits (143), Expect = 7e-10
Identities = 32/72 (44%), Positives = 43/72 (59%)
Frame = -3
Query: 480 GXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLET 301
G + + RMPFGLRNAPATFQR ++++ L L LDD+ I S HL ++
Sbjct: 326 GHYEYLRMPFGLRNAPATFQRCMNNI--LRPLLNKHCLVYLDDIIIFSTSLTEHLNSIQL 383
Query: 300 VFNRLAEFNLHL 265
VF +LA+ NL L
Sbjct: 384 VFTKLADANLKL 395
>AJ000387-3|CAA04050.1| 1217|Drosophila melanogaster reverse
transcriptase protein.
Length = 1217
Score = 69.7 bits (163), Expect = 3e-12
Identities = 27/74 (36%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = -2
Query: 247 FARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNFSKV 68
F R+ +++LGH++TQ+GV +P K+SA+ + P+N + +++FL ++RKFI +F+++
Sbjct: 512 FLRKEIEFLGHIVTQDGVKPNPNKISAIKKFPCPTNRRAIKSFLGLLGYYRKFIRDFARI 571
Query: 67 AEPLTR-LTRKNQI 29
+P+T+ L K Q+
Sbjct: 572 TKPMTKQLKGKRQV 585
Score = 68.5 bits (160), Expect = 6e-12
Identities = 39/93 (41%), Positives = 51/93 (54%)
Frame = -3
Query: 543 HTGNSNVRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILR 364
H N ++ KT F G + F RMPFGL+NAPATFQR++DS+ L L
Sbjct: 417 HQIEMNPKDIAKTA--FTVEGGHYEFTRMPFGLKNAPATFQRVMDSV--LGDLNGTICLF 472
Query: 363 XLDDLCIISQGYQRHLQDLETVFNRLAEFNLHL 265
LDD+ I S Q+HL D++ VF +L N L
Sbjct: 473 YLDDIIIFSPSLQKHLLDIKMVFEKLRAANFKL 505
>AF541947-2|AAN34648.1| 407|Drosophila melanogaster truncated pol
protein protein.
Length = 407
Score = 69.7 bits (163), Expect = 3e-12
Identities = 37/93 (39%), Positives = 53/93 (56%)
Frame = -3
Query: 543 HTGNSNVRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILR 364
H N R+ KT F G + F RMPFGL+NAPATFQR++D++ L L
Sbjct: 285 HQIQMNPRDASKTA--FTVENGHYEFTRMPFGLKNAPATFQRVMDNV--LGDLVGNVCLV 340
Query: 363 XLDDLCIISQGYQRHLQDLETVFNRLAEFNLHL 265
LDD+ + S Q+H+ D+++VF +L NL +
Sbjct: 341 YLDDIIVFSPSLQKHIADIKSVFTKLQNANLKI 373
Score = 40.7 bits (91), Expect = 0.001
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAV 164
Q +C F R+ + +LGH++TQEGV +P K+ +
Sbjct: 374 QPSKCSFLRKEIDFLGHIVTQEGVKPNPLKIQTI 407
>AF364549-2|AAK52055.1| 1013|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 1013
Score = 69.3 bits (162), Expect = 3e-12
Identities = 28/69 (40%), Positives = 47/69 (68%)
Frame = -2
Query: 247 FARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNFSKV 68
F ++SV +LG ++T G +TDPEKV A+ E EP N+ +R+FL S++R FI +F+ +
Sbjct: 355 FFKKSVSFLGFIVTNNGAATDPEKVKAIKEFPEPKNVFEVRSFLGLASYYRCFIKDFASI 414
Query: 67 AEPLTRLTR 41
A P++ + +
Sbjct: 415 ARPISDILK 423
Score = 50.4 bits (115), Expect = 2e-06
Identities = 27/90 (30%), Positives = 47/90 (52%)
Frame = -3
Query: 519 ECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCII 340
E D+ F G + F+R+PFGLRNA + FQR ID + + + +DD+ I
Sbjct: 266 ERDREKTAFAVNGGKYEFRRLPFGLRNAASIFQRTIDDILREQIGKFCYV--YVDDVIIF 323
Query: 339 SQGYQRHLQDLETVFNRLAEFNLHLNRESA 250
S+ H++ ++ V L + N+ ++ E +
Sbjct: 324 SEDENDHVKHVDWVLKSLYDANMRISAEKS 353
>AF541948-2|AAN34651.1| 1006|Drosophila melanogaster pol protein
protein.
Length = 1006
Score = 68.5 bits (160), Expect = 6e-12
Identities = 30/92 (32%), Positives = 55/92 (59%)
Frame = -2
Query: 307 RNSFQSSCGIQPTPQQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHL 128
R FQ+ Q +C F + +LGH+++ EG+ +PEK+ A+ P+ K +
Sbjct: 330 RAVFQALSNANLKLQLDKCEFLKHDTYFLGHMVSPEGIRPNPEKLRAIENYPLPTKPKEI 389
Query: 127 RTFLQTCSWFRKFIPNFSKVAEPLTRLTRKNQ 32
++FL ++RKFIP+F+++A+PLT +K++
Sbjct: 390 KSFLGLTGFYRKFIPHFAQIAKPLTTCLKKDK 421
Score = 61.7 bits (143), Expect = 7e-10
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Frame = -3
Query: 519 ECDKTXLP---FVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDL 349
E D +P F G + + RMPFGL+NAPATFQR ++ + L + ++ LDD+
Sbjct: 258 EMDPESIPKTAFTTKTGHYEYTRMPFGLKNAPATFQRCMNDVLR-PLLNKICMV-YLDDI 315
Query: 348 CIISQGYQRHLQDLETVFNRLAEFNLHL 265
+ S + HLQ L VF L+ NL L
Sbjct: 316 IVFSASLEEHLQSLRAVFQALSNANLKL 343
>X03734-1|CAA27371.1| 930|Drosophila melanogaster protein ( D.
melanogaster retrotransposongypsy gene fragment for
reverse transcriptase-like enzyme.).
Length = 930
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/74 (37%), Positives = 50/74 (67%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q + F ++SV+YLG +++++G +DPEKV A+ E EP + +R+FL S++R FI
Sbjct: 353 QEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIK 412
Query: 82 NFSKVAEPLTRLTR 41
+F+ +A P+T + +
Sbjct: 413 DFAAIARPITDILK 426
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = -3
Query: 519 ECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCII 340
E D+ F G + F R+PFGLRNA + FQR +D + + + +DD+ I
Sbjct: 269 EHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYV--YVDDVIIF 326
Query: 339 SQGYQRHLQDLETVFNRLAEFNLHLNRE 256
S+ H++ ++TV L + N+ +++E
Sbjct: 327 SENESDHVRHIDTVLKCLIDANMRVSQE 354
>M12927-2|AAA70219.1| 1010|Drosophila melanogaster unknown protein
protein.
Length = 1010
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/74 (37%), Positives = 50/74 (67%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q + F ++SV+YLG +++++G +DPEKV A+ E EP + +R+FL S++R FI
Sbjct: 348 QEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIK 407
Query: 82 NFSKVAEPLTRLTR 41
+F+ +A P+T + +
Sbjct: 408 DFAAIARPITDILK 421
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = -3
Query: 519 ECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCII 340
E D+ F G + F R+PFGLRNA + FQR +D + + + +DD+ I
Sbjct: 264 EHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYV--YVDDVIIF 321
Query: 339 SQGYQRHLQDLETVFNRLAEFNLHLNRE 256
S+ H++ ++TV L + N+ +++E
Sbjct: 322 SENESDHVRHIDTVLKCLIDANMRVSQE 349
>EF591042-2|ABQ84943.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/74 (37%), Positives = 50/74 (67%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q + F ++SV+YLG +++++G +DPEKV A+ E EP + +R+FL S++R FI
Sbjct: 383 QEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIK 442
Query: 82 NFSKVAEPLTRLTR 41
+F+ +A P+T + +
Sbjct: 443 DFAAIARPITDILK 456
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = -3
Query: 519 ECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCII 340
E D+ F G + F R+PFGLRNA + FQR +D + + + +DD+ I
Sbjct: 299 EHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYV--YVDDVIIF 356
Query: 339 SQGYQRHLQDLETVFNRLAEFNLHLNRE 256
S+ H++ ++TV L + N+ +++E
Sbjct: 357 SENESDHVRHIDTVLKCLIDANMRVSQE 384
>DQ887187-2|ABI48306.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/74 (37%), Positives = 50/74 (67%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q + F ++SV+YLG +++++G +DPEKV A+ E EP + +R+FL S++R FI
Sbjct: 348 QEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIK 407
Query: 82 NFSKVAEPLTRLTR 41
+F+ +A P+T + +
Sbjct: 408 DFAAIARPITDILK 421
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = -3
Query: 519 ECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCII 340
E D+ F G + F R+PFGLRNA + FQR +D + + + +DD+ I
Sbjct: 264 EHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYV--YVDDVIIF 321
Query: 339 SQGYQRHLQDLETVFNRLAEFNLHLNRE 256
S+ H++ ++TV L + N+ +++E
Sbjct: 322 SENESDHVRHIDTVLKCLIDANMRVSQE 349
>DQ887186-2|ABI48303.1| 1010|Drosophila melanogaster pol protein
protein.
Length = 1010
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/74 (37%), Positives = 50/74 (67%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q + F ++SV+YLG +++++G +DPEKV A+ E EP + +R+FL S++R FI
Sbjct: 348 QEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIK 407
Query: 82 NFSKVAEPLTRLTR 41
+F+ +A P+T + +
Sbjct: 408 DFAAIARPITDILK 421
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = -3
Query: 519 ECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCII 340
E D+ F G + F R+PFGLRNA + FQR +D + + + +DD+ I
Sbjct: 264 EHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYV--YVDDVIIF 321
Query: 339 SQGYQRHLQDLETVFNRLAEFNLHLNRE 256
S+ H++ ++TV L + N+ +++E
Sbjct: 322 SENESDHVRHIDTVLKCLIDANMRVSQE 349
>AF033821-2|AAC82604.1| 1463|Drosophila melanogaster Prgag-pol
protein.
Length = 1463
Score = 67.7 bits (158), Expect = 1e-11
Identities = 28/74 (37%), Positives = 50/74 (67%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q + F ++SV+YLG +++++G +DPEKV A+ E EP + +R+FL S++R FI
Sbjct: 801 QEKTRFFKESVEYLGFIVSKDGTKSDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIK 860
Query: 82 NFSKVAEPLTRLTR 41
+F+ +A P+T + +
Sbjct: 861 DFAAIARPITDILK 874
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = -3
Query: 519 ECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCII 340
E D+ F G + F R+PFGLRNA + FQR +D + + + +DD+ I
Sbjct: 717 EHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYV--YVDDVIIF 774
Query: 339 SQGYQRHLQDLETVFNRLAEFNLHLNRE 256
S+ H++ ++TV L + N+ +++E
Sbjct: 775 SENESDHVRHIDTVLKCLIDANMRVSQE 802
>U89994-2|AAB50148.1| 1041|Drosophila melanogaster reverse
transcriptase polyprotein protein.
Length = 1041
Score = 66.5 bits (155), Expect = 2e-11
Identities = 27/74 (36%), Positives = 50/74 (67%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
+ + F ++SV+YLG +++ G++T P KV A+ + +P+NL +R+FL S++R FI
Sbjct: 379 KEKSFFFKESVEYLGFMVSSGGITTSPSKVEAIQKYNQPTNLFSVRSFLGLASYYRCFIK 438
Query: 82 NFSKVAEPLTRLTR 41
+F+ +A PLT + +
Sbjct: 439 DFASIARPLTDILK 452
Score = 60.5 bits (140), Expect = 2e-09
Identities = 31/91 (34%), Positives = 51/91 (56%)
Frame = -3
Query: 519 ECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCII 340
E D+ F G + F R+PFGL+NAP+ FQR ID + + + +DD+ I
Sbjct: 295 EKDRAKTAFSVGNGKYEFCRLPFGLKNAPSIFQRAIDDVVRDRIGKSCYV--YVDDVIIF 352
Query: 339 SQGYQRHLQDLETVFNRLAEFNLHLNRESAF 247
S G + H+ D+ V +RL+ N+ +++E +F
Sbjct: 353 SNGIEDHVNDVAWVLDRLSGANMRVSKEKSF 383
>EF591043-2|ABQ84946.1| 1045|Drosophila melanogaster pol protein
protein.
Length = 1045
Score = 65.7 bits (153), Expect = 4e-11
Identities = 28/74 (37%), Positives = 49/74 (66%)
Frame = -2
Query: 262 QRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIP 83
Q + F +SV+YLG +++++G +DPEKV A+ E EP + +R+FL S++R FI
Sbjct: 383 QEKTRFFTESVEYLGFIVSKDGTISDPEKVKAIQEYPEPDCVYKVRSFLGLASYYRVFIK 442
Query: 82 NFSKVAEPLTRLTR 41
+F+ +A P+T + +
Sbjct: 443 DFAAIARPITDILK 456
Score = 49.6 bits (113), Expect = 3e-06
Identities = 27/88 (30%), Positives = 47/88 (53%)
Frame = -3
Query: 519 ECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCII 340
E D+ F G + F R+PFGLRNA + FQR +D + + + +DD+ I
Sbjct: 299 EHDREKTSFSVNGGKYEFCRLPFGLRNASSIFQRALDDVLREQIGKICYV--YVDDVIIF 356
Query: 339 SQGYQRHLQDLETVFNRLAEFNLHLNRE 256
S+ H++ ++TV L + N+ +++E
Sbjct: 357 SENESDHVRHIDTVLKCLIDANMRVSQE 384
>AY928610-2|AAX28844.1| 1088|Drosophila melanogaster reverse
transcriptase protein.
Length = 1088
Score = 65.3 bits (152), Expect = 5e-11
Identities = 26/77 (33%), Positives = 49/77 (63%)
Frame = -2
Query: 265 QQRECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFI 86
Q + F R+ ++LGH+++QEGV +P K+ A+ P + K +++FL ++RKFI
Sbjct: 392 QLTKSYFLRRETEFLGHIVSQEGVRPNPNKIEAIKNFPCPHSKKSIKSFLGLLGYYRKFI 451
Query: 85 PNFSKVAEPLTRLTRKN 35
+F+++ +P+T+ R N
Sbjct: 452 RDFARLTQPMTQKLRGN 468
Score = 63.7 bits (148), Expect = 2e-10
Identities = 37/109 (33%), Positives = 53/109 (48%)
Frame = -3
Query: 513 DKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQ 334
D F G + F RMPFGL+NAPATFQR++D++ L L LDD+ I S
Sbjct: 311 DTPKTAFTVEGGHYEFIRMPFGLKNAPATFQRVMDNI--FGDLIGTICLVYLDDIIIFST 368
Query: 333 GYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLP 187
Q H L+T+F RL N + ++ R + G + ++ P
Sbjct: 369 SLQEHFIHLKTIFGRLRSANFKVQLTKSYFLRRETEFLGHIVSQEGVRP 417
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = -2
Query: 259 RECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPN 80
++C F ++ + +LGH+I + EK SAV P N+K ++ FL +FRKFIP
Sbjct: 676 KKCNFMQRRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFLGLTGFFRKFIPG 735
Query: 79 FSKVAEPLTRLTRKNQIW 26
++++A PLT L +K+ I+
Sbjct: 736 YAQIARPLTDLLKKDAIF 753
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
V E K FV G F F + PFG +N+PA F R + + + L +DD+
Sbjct: 588 VEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFVQFIFQELINSNIMQL-YMDDII 646
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLN-RESAFSQDR 235
+ + + ++ E V R AEF L + ++ F Q R
Sbjct: 647 VYAATPEECMEKTEMVLKRAAEFGLKIKWKKCNFMQRR 684
>AY050234-1|AAK84933.1| 1026|Drosophila melanogaster SD02026p
protein.
Length = 1026
Score = 64.9 bits (151), Expect = 7e-11
Identities = 29/78 (37%), Positives = 48/78 (61%)
Frame = -2
Query: 259 RECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPN 80
++C F ++ + +LGH+I + EK SAV P N+K ++ FL +FRKFIP
Sbjct: 370 KKCNFMQRRIHFLGHIIEGGQICPGKEKTSAVNSFGTPQNVKAVQGFLGLTGFFRKFIPG 429
Query: 79 FSKVAEPLTRLTRKNQIW 26
++++A PLT L +K+ I+
Sbjct: 430 YAQIARPLTDLLKKDAIF 447
Score = 47.6 bits (108), Expect = 1e-05
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
V E K FV G F F + PFG +N+PA F R + + + L +DD+
Sbjct: 282 VEEASKPYTAFVTREGLFEFNKAPFGFKNSPAAFIRFVQFIFQELINSNIMQL-YMDDII 340
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLN-RESAFSQDR 235
+ + + ++ E V R AEF L + ++ F Q R
Sbjct: 341 VYAATPEECMEKTEMVLKRAAEFGLKIKWKKCNFMQRR 378
>AY180916-3|AAN87268.1| 994|Drosophila melanogaster ORF3 protein.
Length = 994
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/82 (36%), Positives = 46/82 (56%)
Frame = -2
Query: 256 ECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNF 77
+C F + V YLGH T +G+ D K + + P++ R F+ C+++R+FI NF
Sbjct: 263 KCSFFMKEVTYLGHKCTDKGILPDDTKYEVIEKYPIPTDADSARRFVAFCNYYRRFIKNF 322
Query: 76 SKVAEPLTRLTRKNQIWIWGAE 11
S + LTRL +KN + W AE
Sbjct: 323 SDHSRHLTRLCKKNVQFEWTAE 344
Score = 43.6 bits (98), Expect = 2e-04
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = -3
Query: 480 GXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLET 301
G +RF R+P+GL+ AP +FQR + + + L+ +DDL +I + L++L
Sbjct: 190 GSYRFTRLPYGLKVAPNSFQRRM--TLAFSGLEPSQAFLYMDDLVVIGCSEKHMLKNLTN 247
Query: 300 VFNRLAEFNLHLN 262
VF NL L+
Sbjct: 248 VFELCRRHNLKLH 260
>AY113457-1|AAM29462.1| 825|Drosophila melanogaster RE36839p
protein.
Length = 825
Score = 61.7 bits (143), Expect = 7e-10
Identities = 27/82 (32%), Positives = 45/82 (54%)
Frame = -2
Query: 256 ECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNF 77
+C F V +LGH T +G+ D K A+ P++ R F+ C+++R+FI NF
Sbjct: 402 KCSFFMSEVTFLGHKCTDKGILPDDTKYDAIQRYPVPTDADSARRFVAFCNYYRRFIQNF 461
Query: 76 SKVAEPLTRLTRKNQIWIWGAE 11
+ + +TRL +KN + W A+
Sbjct: 462 ADYSRHITRLCKKNVKFEWTAD 483
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/88 (28%), Positives = 43/88 (48%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
+ E + F G +RF R+P+GL+ AP +FQR++ + L+ +DDL
Sbjct: 314 LEEDSRNITSFSTSSGSYRFTRLPYGLKIAPNSFQRMM--TMAFTGLEPSQAFLYMDDLI 371
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLN 262
+I + ++L VF + NL L+
Sbjct: 372 VIGCSEKHMTKNLTNVFELCRKNNLKLH 399
>AF541949-2|AAN34652.1| 826|Drosophila melanogaster pol protein
protein.
Length = 826
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = -2
Query: 256 ECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNF 77
+C F V +LGH T +GV D +K + P + R F+ C+++R+FI NF
Sbjct: 97 KCSFFMHEVTFLGHKCTDKGVLPDDKKYDVIKNYPVPHDADSARRFVAFCNYYRRFIRNF 156
Query: 76 SKVAEPLTRLTRKNQIWIWGAE 11
+ + +TRL +KN + W +E
Sbjct: 157 ADYSRHITRLCKKNVPFEWSSE 178
Score = 52.4 bits (120), Expect = 4e-07
Identities = 34/117 (29%), Positives = 55/117 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
+ E + F G +RF R+PFGL+ AP +FQR++ S + L+ +DDL
Sbjct: 9 LEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM--TISFSGLEPSQAFLYMDDLM 66
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLPTLKR 175
+I + +++L VFN ++NL L+ E + G K LP K+
Sbjct: 67 VIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKK 123
>AF420242-1|AAL16060.1| 826|Drosophila melanogaster RNA-directed
DNA polymerase protein.
Length = 826
Score = 60.9 bits (141), Expect = 1e-09
Identities = 27/82 (32%), Positives = 44/82 (53%)
Frame = -2
Query: 256 ECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNF 77
+C F V +LGH T +GV D +K + P + R F+ C+++R+FI NF
Sbjct: 97 KCSFFMHEVTFLGHKCTDKGVLPDDKKYDVIKNYPVPHDADSARRFVAFCNYYRRFIRNF 156
Query: 76 SKVAEPLTRLTRKNQIWIWGAE 11
+ + +TRL +KN + W +E
Sbjct: 157 ADYSRHITRLCKKNVPFEWSSE 178
Score = 52.4 bits (120), Expect = 4e-07
Identities = 34/117 (29%), Positives = 55/117 (47%)
Frame = -3
Query: 525 VRECDKTXLPFVCPLGXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLC 346
+ E + F G +RF R+PFGL+ AP +FQR++ S + L+ +DDL
Sbjct: 9 LEENSRNITSFSTSNGSYRFTRLPFGLKIAPNSFQRMM--TISFSGLEPSQAFLYMDDLM 66
Query: 345 IISQGYQRHLQDLETVFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLPTLKR 175
+I + +++L VFN ++NL L+ E + G K LP K+
Sbjct: 67 VIGCSEKHMIKNLTDVFNVCRKYNLKLHPEKCSFFMHEVTFLGHKCTDKGVLPDDKK 123
>X04132-4|CAA27750.1| 1237|Drosophila melanogaster protein (
Drosophila retrotransposon412 genome. ).
Length = 1237
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = -2
Query: 256 ECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNF 77
+C F V +LGH T +G+ D +K + P + R F+ C+++R+FI NF
Sbjct: 508 KCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNF 567
Query: 76 SKVAEPLTRLTRKNQIWIWGAE 11
+ + +TRL +KN + W E
Sbjct: 568 ADYSRHITRLCKKNVPFEWTDE 589
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/102 (30%), Positives = 51/102 (50%)
Frame = -3
Query: 480 GXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLET 301
G +RF R+PFGL+ AP +FQR++ + + ++ +DDL +I + L++L
Sbjct: 435 GSYRFTRLPFGLKIAPNSFQRMM--TIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTE 492
Query: 300 VFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLPTLKR 175
VF + E+NL L+ E + G K LP K+
Sbjct: 493 VFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKK 534
>AY928609-2|AAX28841.1| 1000|Drosophila melanogaster RNA-dependent
DNA polymerase protein.
Length = 1000
Score = 58.8 bits (136), Expect = 5e-09
Identities = 26/82 (31%), Positives = 43/82 (52%)
Frame = -2
Query: 256 ECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNF 77
+C F V +LGH T +G+ D +K + P + R F+ C+++R+FI NF
Sbjct: 271 KCSFFMHEVTFLGHKCTDKGILPDDKKYDVIQNYPVPHDADSARRFVAFCNYYRRFIKNF 330
Query: 76 SKVAEPLTRLTRKNQIWIWGAE 11
+ + +TRL +KN + W E
Sbjct: 331 ADYSRHITRLCKKNVPFEWTDE 352
Score = 52.4 bits (120), Expect = 4e-07
Identities = 31/102 (30%), Positives = 51/102 (50%)
Frame = -3
Query: 480 GXFRFKRMPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLET 301
G +RF R+PFGL+ AP +FQR++ + + ++ +DDL +I + L++L
Sbjct: 198 GSYRFTRLPFGLKIAPNSFQRMM--TIAFSGIEPSQAFLYMDDLIVIGCSEKHMLKNLTE 255
Query: 300 VFNRLAEFNLHLNRESAFSQDRASSTWGMSLHKKAFLPTLKR 175
VF + E+NL L+ E + G K LP K+
Sbjct: 256 VFGKCREYNLKLHPEKCSFFMHEVTFLGHKCTDKGILPDDKK 297
>X14037-1|CAA32198.1| 1053|Drosophila melanogaster polyprotein
protein.
Length = 1053
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/82 (28%), Positives = 46/82 (56%)
Frame = -2
Query: 256 ECIFARQSVKYLGHVITQEGVSTDPEKVSAVLEMKEPSNLKHLRTFLQTCSWFRKFIPNF 77
+C F + +V+YLG+ + + + K++++ + P + +R F+ S+FRKF+ F
Sbjct: 634 KCSFLKTTVQYLGYEVRAGEIRPNVRKIASLSSLPPPQTVSGVRQFIGLASYFRKFVSGF 693
Query: 76 SKVAEPLTRLTRKNQIWIWGAE 11
S++ +PL L+ + W AE
Sbjct: 694 SQLMKPLYSLSSGSGKITWSAE 715
Score = 37.5 bits (83), Expect = 0.012
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = -3
Query: 459 MPFGLRNAPATFQRLIDSLCSCAALQXVTILRXLDDLCIISQGYQRHLQDLETVFNRLAE 280
+P GL+NAP+ FQR + + A V + +DD+ ++S + L+ L+TV N L +
Sbjct: 568 VPDGLKNAPSVFQRTVINALGDLANSFVIV--YMDDIMVVSPTKELALERLKTVLNVLTK 625
Query: 279 FNLHLN 262
N
Sbjct: 626 AGFTFN 631
>X89022-1|CAA61431.1| 732|Drosophila melanogaster Tosca protein.
Length = 732
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 267 LNRESAFSQDRASSTWGMSLHKKAFLPTLKR 175
L+ +S S RASST S ++ FLPT KR
Sbjct: 657 LSDDSCSSDQRASSTSSSSQQRQNFLPTSKR 687
>X89021-1|CAA61430.1| 732|Drosophila melanogaster Tosca protein.
Length = 732
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 267 LNRESAFSQDRASSTWGMSLHKKAFLPTLKR 175
L+ +S S RASST S ++ FLPT KR
Sbjct: 657 LSDDSCSSDQRASSTSSSSQQRQNFLPTSKR 687
>AY051794-1|AAK93218.1| 732|Drosophila melanogaster LD31018p
protein.
Length = 732
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 267 LNRESAFSQDRASSTWGMSLHKKAFLPTLKR 175
L+ +S S RASST S ++ FLPT KR
Sbjct: 657 LSDDSCSSDQRASSTSSSSQQRQNFLPTSKR 687
>AE014134-2957|AAF53687.1| 732|Drosophila melanogaster CG10387-PA
protein.
Length = 732
Score = 29.1 bits (62), Expect = 4.3
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = -3
Query: 267 LNRESAFSQDRASSTWGMSLHKKAFLPTLKR 175
L+ +S S RASST S ++ FLPT KR
Sbjct: 657 LSDDSCSSDQRASSTSSSSQQRQNFLPTSKR 687
>BT029268-1|ABK30905.1| 461|Drosophila melanogaster IP07471p
protein.
Length = 461
Score = 28.3 bits (60), Expect = 7.6
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = -2
Query: 274 PTPQQRECIFARQS-VKYLG-HVITQEGVSTDPEKVSAVLEMKEPSNLKHLR 125
PTP R+ ++ + KYL VI G+ P + V+EM+ + L HLR
Sbjct: 6 PTPSPRKSLYVGHTDYKYLRWQVIDTPGILDHPLEERNVIEMQAITALAHLR 57
>AE014296-1382|AAF50478.1| 283|Drosophila melanogaster CG13675-PA
protein.
Length = 283
Score = 28.3 bits (60), Expect = 7.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -2
Query: 394 RRVTXGNYFKXLG*SVYNISRVPAPSTGPRNSFQSSCGIQPTPQQRE 254
R V NY K S R PST P++S+ SS Q QQ++
Sbjct: 135 RIVDSSNYSKMTKNSFRGSMRFTTPSTNPQSSYSSSQQQQQQQQQQQ 181
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,016,214
Number of Sequences: 53049
Number of extensions: 549838
Number of successful extensions: 1781
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1764
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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