Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1438
(452 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein minu... 138 4e-32
UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47; Eutele... 119 3e-26
UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1; Leptino... 104 1e-21
UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18; Fungi/... 101 7e-21
UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9; Eukaryo... 95 6e-19
UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18; Euka... 91 1e-17
UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1... 87 2e-16
UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2; Dikarya... 79 4e-14
UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3; Piropla... 76 4e-13
UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26; Fung... 74 1e-12
UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal ... 74 2e-12
UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2; Schiz... 73 4e-12
UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2; Plasmod... 72 7e-12
UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat riboso... 70 2e-11
UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2; Trypano... 68 8e-11
UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat riboso... 67 2e-10
UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=... 66 3e-10
UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5; Amniota... 64 2e-09
UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5; Oligohy... 62 7e-09
UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2; Dictyos... 61 9e-09
UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13; Eukary... 61 9e-09
UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=... 59 5e-08
UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4; ... 58 1e-07
UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia... 56 5e-07
UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes a... 48 9e-05
UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;... 45 7e-04
UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1; Encepha... 44 0.002
UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1; Strongy... 43 0.003
UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoe... 41 0.014
UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillar... 37 0.23
UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma brucei... 35 0.94
UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella ve... 35 0.94
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 35 0.94
UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S riboso... 33 2.2
UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;... 33 2.2
UniRef50_Q4T1L6 Cluster: Chromosome 1 SCAF10546, whole genome sh... 33 2.9
UniRef50_Q00547-2 Cluster: Isoform RHAMM1 of Q00547 ; n=2; Murin... 33 3.8
UniRef50_A1AQQ0 Cluster: Response regulator receiver protein; n=... 32 5.0
UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1; ... 32 5.0
UniRef50_A5KPW5 Cluster: Putative uncharacterized protein; n=3; ... 32 6.6
UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2; ... 32 6.6
UniRef50_UPI00005A506C Cluster: PREDICTED: similar to Hyaluronan... 31 8.7
UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1; ... 31 8.7
>UniRef50_P49630 Cluster: 60S ribosomal protein L36 (Protein
minute(1)1B); n=18; Coelomata|Rep: 60S ribosomal protein
L36 (Protein minute(1)1B) - Drosophila melanogaster
(Fruit fly)
Length = 115
Score = 138 bits (335), Expect = 4e-32
Identities = 74/110 (67%), Positives = 83/110 (75%), Gaps = 1/110 (0%)
Frame = -3
Query: 399 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*-AS*TKGSSNETLQVVRDLVREVVG 223
MA R+E+A+GL KGHKT+KI K DK +K S K + +RDLVREVVG
Sbjct: 1 MAVRYELAIGLNKGHKTSKIR-NVKYTGDKKVKGLRGSRLKNIQTRHTKFMRDLVREVVG 59
Query: 222 HAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
HA YEKR MELLKVSKDKRALKFLKRRLGTHIRAKRKREELSN+L Q+RK
Sbjct: 60 HAPYEKRTMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNILTQLRK 109
>UniRef50_Q9Y3U8 Cluster: 60S ribosomal protein L36; n=47;
Euteleostomi|Rep: 60S ribosomal protein L36 - Homo
sapiens (Human)
Length = 105
Score = 119 bits (286), Expect = 3e-26
Identities = 66/109 (60%), Positives = 77/109 (70%)
Frame = -3
Query: 399 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGH 220
MA R+ +AVGL KGHK TK K S +G + + VRD++REV G
Sbjct: 1 MALRYPMAVGLNKGHKVTK----------NVSKPRHSRRRGRLTKHTKFVRDMIREVCGF 50
Query: 219 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
A YE+RAMELLKVSKDKRALKF+K+R+GTHIRAKRKREELSNVLA MRK
Sbjct: 51 APYERRAMELLKVSKDKRALKFIKKRVGTHIRAKRKREELSNVLAAMRK 99
>UniRef50_Q1G198 Cluster: 60S ribosomal protein L36; n=1;
Leptinotarsa decemlineata|Rep: 60S ribosomal protein L36
- Leptinotarsa decemlineata (Colorado potato beetle)
Length = 84
Score = 104 bits (249), Expect = 1e-21
Identities = 51/70 (72%), Positives = 56/70 (80%)
Frame = -3
Query: 282 KGSSNETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 103
KG + + VRD++REVVGH EKR ELLKV KDKRALKFLKRRLGTHIRAKRKREE
Sbjct: 10 KGIQTKHTKFVRDIIREVVGHXPXEKRXXELLKVXKDKRALKFLKRRLGTHIRAKRKREE 69
Query: 102 LSNVLAQMRK 73
LSN+L QM K
Sbjct: 70 LSNILTQMGK 79
Score = 31.5 bits (68), Expect = 8.7
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 308 PSRIRPARLKGLQTKHSK 255
P R P RLKG+QTKH+K
Sbjct: 1 PPRFEPERLKGIQTKHTK 18
>UniRef50_P49181 Cluster: 60S ribosomal protein L36; n=18;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36 -
Caenorhabditis elegans
Length = 104
Score = 101 bits (242), Expect = 7e-21
Identities = 52/103 (50%), Positives = 71/103 (68%)
Frame = -3
Query: 381 IAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGHAQYEKR 202
+AVGL KGH T++ +K + KG +++ ++VR+LVRE+ G A YE+R
Sbjct: 9 LAVGLNKGHAATQLP----------VKQRQNRHKGVASKKTKIVRELVREITGFAPYERR 58
Query: 201 AMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
+E+L++SKDKRALKFLKRR+GTH RAK KREEL NV+ RK
Sbjct: 59 VLEMLRISKDKRALKFLKRRIGTHRRAKGKREELQNVIIAQRK 101
>UniRef50_A2ZZF6 Cluster: 60S ribosomal protein L36; n=9;
Eukaryota|Rep: 60S ribosomal protein L36 - Oryza sativa
subsp. japonica (Rice)
Length = 143
Score = 95.1 bits (226), Expect = 6e-19
Identities = 53/106 (50%), Positives = 67/106 (63%)
Frame = -3
Query: 393 PRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGHAQ 214
P+ + VG+ KGH TK + + S KG S + + VR L+REVVG A
Sbjct: 6 PKSGLFVGINKGHVVTK----------RELPPRPSDRKGKSTKRVNFVRGLIREVVGFAP 55
Query: 213 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 76
YEKR ELLKV KDKRALK KR+LGTH RAK+KREE++ V+ +MR
Sbjct: 56 YEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVIRKMR 101
>UniRef50_O80929 Cluster: 60S ribosomal protein L36-1; n=18;
Eukaryota|Rep: 60S ribosomal protein L36-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 113
Score = 90.6 bits (215), Expect = 1e-17
Identities = 52/100 (52%), Positives = 64/100 (64%)
Frame = -3
Query: 375 VGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGHAQYEKRAM 196
VGL KGH T R+ + + KG +++ +R L+REV G A YEKR
Sbjct: 12 VGLNKGHVVT-----RRELAPRPNSR-----KGKTSKRTIFIRKLIREVAGMAPYEKRIT 61
Query: 195 ELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 76
ELLKV KDKRALK KR+LGTH RAKRKREE+S+VL +MR
Sbjct: 62 ELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMR 101
>UniRef50_Q7XY66 Cluster: Putative 60S ribosomal protein L36; n=1;
Griffithsia japonica|Rep: Putative 60S ribosomal protein
L36 - Griffithsia japonica (Red alga)
Length = 94
Score = 86.6 bits (205), Expect = 2e-16
Identities = 39/62 (62%), Positives = 49/62 (79%)
Frame = -3
Query: 261 LQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 82
LQVVR ++ EV G A YEKR +ELL++ KDKRALKF K+RLGTH+RAKRKRE+++ L
Sbjct: 32 LQVVRSVINEVCGFAPYEKRVIELLRIGKDKRALKFAKKRLGTHLRAKRKREQMAEALRS 91
Query: 81 MR 76
R
Sbjct: 92 KR 93
>UniRef50_Q5KEE1 Cluster: 60S ribosomal protein L36; n=2;
Dikarya|Rep: 60S ribosomal protein L36 - Cryptococcus
neoformans (Filobasidiella neoformans)
Length = 197
Score = 79.0 bits (186), Expect = 4e-14
Identities = 47/112 (41%), Positives = 62/112 (55%)
Frame = -3
Query: 408 SEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREV 229
S A R + G+ KG TT I + K +K E VR ++REV
Sbjct: 93 SSAPAQRSNLRYGMNKGRPTTVIPKTARPSNKKGLKT----------EKKTFVRSVIREV 142
Query: 228 VGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
G + YEKR MELL+ SKDK+A K K+RLGT +R+KRK EELS V+ + R+
Sbjct: 143 AGFSPYEKRVMELLRNSKDKKAKKLTKKRLGTLLRSKRKIEELSAVIVEQRR 194
>UniRef50_A7ATP0 Cluster: 60S ribosomal protein L36; n=3;
Piroplasmida|Rep: 60S ribosomal protein L36 - Babesia
bovis
Length = 116
Score = 75.8 bits (178), Expect = 4e-13
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Frame = -3
Query: 411 QSEIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVRE 232
+ +I APR IAVGL KGH TT I K+++ S KG + +V +++RE
Sbjct: 6 EMKIEAPRSGIAVGLNKGHITTPIPLV------KSVR--PSRKKGLKTKRNALVSEVIRE 57
Query: 231 VVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
V G A YE+ +EL+K S KRALKF K+RLGT RAK K +E+ V+ RK
Sbjct: 58 VCGFAPYERHMIELIKTGSASAQKRALKFAKKRLGTLRRAKTKNDEMMRVVELQRK 113
>UniRef50_P05745 Cluster: 60S ribosomal protein L36-A; n=26;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 100
Score = 74.1 bits (174), Expect = 1e-12
Identities = 42/109 (38%), Positives = 65/109 (59%)
Frame = -3
Query: 399 MAPRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGH 220
M + IA+GL KG K T ++ K S KG+++ + VR LVRE+ G
Sbjct: 1 MTVKTGIAIGLNKGKKVTSMTPAPK----------ISYKKGAASNRTKFVRSLVREIAGL 50
Query: 219 AQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
+ YE+R ++L++ S +KRA K K+RLG+ RAK K EE++N++A R+
Sbjct: 51 SPYERRLIDLIRNSGEKRARKVAKKRLGSFTRAKAKVEEMNNIIAASRR 99
>UniRef50_UPI00005A004D Cluster: PREDICTED: similar to ribosomal
protein L36; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L36 - Canis familiaris
Length = 107
Score = 73.7 bits (173), Expect = 2e-12
Identities = 33/46 (71%), Positives = 42/46 (91%)
Frame = -3
Query: 210 EKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
++RAMELLKVSKDKR L+ +K+R+GTH+RAKR+ EELSNVLA +RK
Sbjct: 56 QRRAMELLKVSKDKRTLRLIKKRVGTHVRAKRETEELSNVLAAIRK 101
>UniRef50_Q92365 Cluster: 60S ribosomal protein L36-A; n=2;
Schizosaccharomyces pombe|Rep: 60S ribosomal protein
L36-A - Schizosaccharomyces pombe (Fission yeast)
Length = 99
Score = 72.5 bits (170), Expect = 4e-12
Identities = 39/84 (46%), Positives = 53/84 (63%)
Frame = -3
Query: 327 KGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLK 148
K +T + + S KG ++ VR +VREV G A YE+R MEL++ S+DKRA K K
Sbjct: 13 KVLTKRQLPERPSRRKGQLSKRTSFVRSIVREVAGFAPYERRVMELIRNSQDKRARKLAK 72
Query: 147 RRLGTHIRAKRKREELSNVLAQMR 76
+RLGT RAK K EEL++V+ R
Sbjct: 73 KRLGTLKRAKGKIEELTSVIQSSR 96
>UniRef50_Q7R9S3 Cluster: 60S ribosomal protein L36; n=2;
Plasmodium|Rep: 60S ribosomal protein L36 - Plasmodium
yoelii yoelii
Length = 113
Score = 71.7 bits (168), Expect = 7e-12
Identities = 44/110 (40%), Positives = 62/110 (56%), Gaps = 3/110 (2%)
Frame = -3
Query: 393 PRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGHAQ 214
P IAVG GH TK S +K I K++ N+ L + D+VRE+ G +
Sbjct: 9 PSTGIAVGFNSGHIVTKRSV-KKSIKKKSVPK---------NKDL--INDVVREIAGFSP 56
Query: 213 YEKRAMELLKVSKD---KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
YEKR +EL+KV KR+LK+ K++LGTH R K KREE+ ++ R+
Sbjct: 57 YEKRLIELIKVGTSAATKRSLKYAKKKLGTHKRGKAKREEIQKIVMMQRR 106
>UniRef50_UPI0000EBDDF6 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=1; Bos taurus|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Bos taurus
Length = 131
Score = 70.1 bits (164), Expect = 2e-11
Identities = 35/64 (54%), Positives = 46/64 (71%)
Frame = -3
Query: 264 TLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLA 85
T + +D+++EV A E+ A E KVSKDK+ALKF+++ LGTHI AKRK ELSNVLA
Sbjct: 42 TTEFSQDVIQEVFSFALNEQHATEQFKVSKDKQALKFIQKMLGTHICAKRKARELSNVLA 101
Query: 84 QMRK 73
R+
Sbjct: 102 TTRE 105
>UniRef50_Q38CY6 Cluster: 60S ribosomal protein L36; n=2;
Trypanosoma brucei|Rep: 60S ribosomal protein L36 -
Trypanosoma brucei
Length = 109
Score = 68.1 bits (159), Expect = 8e-11
Identities = 41/111 (36%), Positives = 61/111 (54%)
Frame = -3
Query: 405 EIMAPRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVV 226
E PR I G KG+KTT+ A R D+ ++ L+ V+ ++ ++V
Sbjct: 7 EAPVPRTGIIAGFNKGYKTTR-RARRPSSNDRY---------ALPHKKLRAVKAIISDLV 56
Query: 225 GHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
G + E+R ELL+V KDKRALKF K+RLG+ AK++R ++ L Q K
Sbjct: 57 GFSPMERRVQELLRVGKDKRALKFCKKRLGSIKAAKKRRAKVEEALRQQTK 107
>UniRef50_UPI0000604754 Cluster: PREDICTED: similar to rat ribosomal
protein L36; n=8; Eutheria|Rep: PREDICTED: similar to
rat ribosomal protein L36 - Mus musculus
Length = 105
Score = 66.9 bits (156), Expect = 2e-10
Identities = 46/110 (41%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = -3
Query: 399 MAPRFEIAVGLRKGHKTTK-ISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVG 223
MA +A+GL KGHK K IS + + + TK + + V+D++REV
Sbjct: 1 MALHCPMAMGLDKGHKVMKNISKPKHSSPHRLL------TKHT-----KFVQDMIREVCD 49
Query: 222 HAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
Y+ + L KVS DK A KF+K+R+G HI KRK EELS V+A MRK
Sbjct: 50 FMSYDWCTVVLPKVSNDKCAFKFIKKRVGMHIHTKRKWEELSIVIAAMRK 99
>UniRef50_Q8I713 Cluster: 60S Ribosomal protein L36, putative; n=2;
Plasmodium|Rep: 60S Ribosomal protein L36, putative -
Plasmodium falciparum (isolate 3D7)
Length = 130
Score = 66.1 bits (154), Expect = 3e-10
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 3/65 (4%)
Frame = -3
Query: 258 QVVRDLVREVVGHAQYEKRAMELLKV---SKDKRALKFLKRRLGTHIRAKRKREELSNVL 88
++++D+VRE+ G + YEKR +EL+K+ + KR+LK+ K++LGTH R K KREE+ V+
Sbjct: 60 ELIKDVVREITGFSPYEKRIIELIKIGTSASTKRSLKYAKKKLGTHKRGKAKREEIQKVV 119
Query: 87 AQMRK 73
R+
Sbjct: 120 ILQRR 124
>UniRef50_Q9BYF3 Cluster: 60S ribosomal protein L36; n=5;
Amniota|Rep: 60S ribosomal protein L36 - Homo sapiens
(Human)
Length = 32
Score = 63.7 bits (148), Expect = 2e-09
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = -3
Query: 189 LKVSKDKRALKFLKRRLGTHIRAKRKREELSN 94
LKVSKDKRALKF+K+R+GTHIRAKRKREELSN
Sbjct: 1 LKVSKDKRALKFIKKRVGTHIRAKRKREELSN 32
>UniRef50_A0DT55 Cluster: 60S ribosomal protein L36; n=5;
Oligohymenophorea|Rep: 60S ribosomal protein L36 -
Paramecium tetraurelia
Length = 110
Score = 61.7 bits (143), Expect = 7e-09
Identities = 43/109 (39%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Frame = -3
Query: 390 RFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGHAQY 211
R IAVGL +G T+ + T K ++ S KG+ + + VR +++EV G + Y
Sbjct: 3 RTGIAVGLNRGFITSSL-------TKKQLRRRPSQRKGTLGKRVLSVRKVIQEVAGLSPY 55
Query: 210 EKRAMELLKVS--KD-KRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
EKR +EL K + KD K+A K +RLGT+ R KRK E + N+ MRK
Sbjct: 56 EKRIIELFKTNQPKDLKKAGKLAAKRLGTNRRGKRKIELVQNLYRAMRK 104
>UniRef50_Q55AQ9 Cluster: 60S ribosomal protein L36; n=2;
Dictyostelium discoideum|Rep: 60S ribosomal protein L36
- Dictyostelium discoideum AX4
Length = 105
Score = 61.3 bits (142), Expect = 9e-09
Identities = 26/54 (48%), Positives = 40/54 (74%)
Frame = -3
Query: 252 VRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNV 91
+RD++RE+ G + YE+R ELLK DKRALK K+RLG+ K+KR++++N+
Sbjct: 45 IRDVIREISGFSPYERRVSELLKSGLDKRALKVAKKRLGSIQAGKKKRDDIANI 98
>UniRef50_P52866 Cluster: 60S ribosomal protein L36; n=13;
Eukaryota|Rep: 60S ribosomal protein L36 - Daucus carota
(Carrot)
Length = 106
Score = 61.3 bits (142), Expect = 9e-09
Identities = 39/96 (40%), Positives = 52/96 (54%)
Frame = -3
Query: 393 PRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGHAQ 214
P + VGL KGH TK K + S KG +++ VR+L+REV G
Sbjct: 6 PNTGLFVGLNKGHIVTK----------KELAPRPSDRKGKTSKRTHFVRNLIREVAGFXP 55
Query: 213 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKRE 106
YEKR ELLKV KDKRALK + ++G H + ++ E
Sbjct: 56 YEKRITELLKVGKDKRALKVRQEKVG-HSQESKEEE 90
>UniRef50_Q4QCE1 Cluster: 60S ribosomal protein l36, putative; n=9;
Trypanosomatidae|Rep: 60S ribosomal protein l36,
putative - Leishmania major
Length = 105
Score = 58.8 bits (136), Expect = 5e-08
Identities = 36/107 (33%), Positives = 55/107 (51%)
Frame = -3
Query: 393 PRFEIAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGHAQ 214
PR I G KGH TT+ + D+ ++ L+ V+ ++ ++VG +
Sbjct: 6 PRTGIIAGFNKGHVTTR-RPRQPSPNDRF---------AVPHKHLRAVKAIIADLVGLSP 55
Query: 213 YEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMRK 73
EKR E L+V K+KRALK+ K+RLG AK+KR ++ L K
Sbjct: 56 LEKRVQEFLRVGKEKRALKYCKKRLGDFTAAKKKRSKMEEALRHATK 102
>UniRef50_A2F3E0 Cluster: Ribosomal protein L36e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L36e,
putative - Trichomonas vaginalis G3
Length = 93
Score = 57.6 bits (133), Expect = 1e-07
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = -3
Query: 276 SSNETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 97
SS + + R +V E+VG YE+ M+L+K+ + + A +FLK+RLGTH RA +K L
Sbjct: 21 SSGKRVNFARKIVHELVGWQPYERHTMDLIKIERRRAARQFLKKRLGTHRRAMKKLNTLE 80
Query: 96 NVLAQ 82
V+ +
Sbjct: 81 EVVQE 85
>UniRef50_Q7QRE6 Cluster: 60S ribosomal protein L36; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L36 -
Giardia lamblia ATCC 50803
Length = 90
Score = 55.6 bits (128), Expect = 5e-07
Identities = 24/54 (44%), Positives = 39/54 (72%)
Frame = -3
Query: 258 QVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELS 97
+ V+ +++E G A YE +ELL+++KD+ AL++ K+RLG RAK KR++LS
Sbjct: 31 EFVKSIIQECTGMAPYEMHIIELLRMNKDRHALRYAKKRLGNIKRAKAKRDQLS 84
>UniRef50_Q16KP4 Cluster: 60S ribosomal protein L36; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L36 - Aedes aegypti
(Yellowfever mosquito)
Length = 86
Score = 48.0 bits (109), Expect = 9e-05
Identities = 24/46 (52%), Positives = 35/46 (76%)
Frame = -3
Query: 258 QVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRA 121
++VRDL+ EVV HA ++K+ M+LLKV +DK AL+F+ +HIRA
Sbjct: 43 KLVRDLIHEVVVHATFKKKDMQLLKVFQDKLALRFMSG--PSHIRA 86
>UniRef50_Q8S8Z4 Cluster: 60S ribosomal protein L36 homolog; n=1;
Allium cepa|Rep: 60S ribosomal protein L36 homolog -
Allium cepa (Onion)
Length = 64
Score = 45.2 bits (102), Expect = 7e-04
Identities = 22/36 (61%), Positives = 28/36 (77%)
Frame = -3
Query: 183 VSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 76
V+K + L+ R+LGTH RAKRKREE+SNVL +MR
Sbjct: 20 VTKRELPLRPSSRKLGTHKRAKRKREEMSNVLRKMR 55
>UniRef50_Q8SRP1 Cluster: 60S RIBOSOMAL PROTEIN L36; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L36
- Encephalitozoon cuniculi
Length = 107
Score = 44.0 bits (99), Expect = 0.002
Identities = 21/67 (31%), Positives = 40/67 (59%)
Frame = -3
Query: 282 KGSSNETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 103
+ + E+ + + E+ G + EK+A+ LL+ + +A K L++RLG+H RA K E+
Sbjct: 40 RAETQESRFLAAAVADEISGLSPLEKKAISLLEAKNNNKAQKLLRKRLGSHKRAVAKVEK 99
Query: 102 LSNVLAQ 82
L+ +L +
Sbjct: 100 LARMLLE 106
>UniRef50_A1BQ89 Cluster: 60S ribosomal protein L36; n=1;
Strongyloides ratti|Rep: 60S ribosomal protein L36 -
Strongyloides ratti
Length = 91
Score = 43.2 bits (97), Expect = 0.003
Identities = 27/67 (40%), Positives = 39/67 (58%)
Frame = -3
Query: 381 IAVGLRKGHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVRDLVREVVGHAQYEKR 202
+A+GL KG + TK A K + +G++ + +VVR+LVRE+ G A YE+R
Sbjct: 10 LAIGLEKGVRVTK----------NARKMRQNRKRGAATKKTKVVRELVREITGFAPYERR 59
Query: 201 AMELLKV 181
MELL V
Sbjct: 60 MMELLLV 66
>UniRef50_O15623 Cluster: 60S ribosomal protein L36; n=3; Entamoeba
histolytica|Rep: 60S ribosomal protein L36 - Entamoeba
histolytica
Length = 103
Score = 40.7 bits (91), Expect = 0.014
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = -3
Query: 255 VVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQMR 76
VV D++RE G YE+ M+LL+ DK+AL + K+ + + E SNVL +
Sbjct: 30 VVNDVIREACGFPAYERHMMDLLRRGLDKKALNYAKKTSWYTQKRTCQAEMKSNVLLEAI 89
Query: 75 K 73
K
Sbjct: 90 K 90
>UniRef50_Q9AW14 Cluster: 60S ribosomal protein L36; n=1; Guillardia
theta|Rep: 60S ribosomal protein L36 - Guillardia theta
(Cryptomonas phi)
Length = 75
Score = 36.7 bits (81), Expect = 0.23
Identities = 15/46 (32%), Positives = 31/46 (67%)
Frame = -3
Query: 225 GHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVL 88
G ++EK+ +K+ +++ALK K++LG RAK+K + ++++L
Sbjct: 26 GLNEFEKKITNYIKLGYEQKALKMSKKKLGNLQRAKKKIDSINHIL 71
>UniRef50_Q9U919 Cluster: PTGT-4 protein; n=1; Trypanosoma
brucei|Rep: PTGT-4 protein - Trypanosoma brucei
Length = 508
Score = 34.7 bits (76), Expect = 0.94
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 42 NGDGDEPGRLPSSSERARC*VLHASSWRGCVCPIVASRTS 161
+G GD P + P SS + RC L SSWR I +RT+
Sbjct: 99 HGKGDRPSQKPKSSSQKRCRHLSGSSWREPRRTIAPARTA 138
>UniRef50_A7TBW5 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 208
Score = 34.7 bits (76), Expect = 0.94
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = -3
Query: 399 MAPRFEIAVGLRKGHKTTK 343
MAP+ E+AVGL+KGHK TK
Sbjct: 155 MAPKVEMAVGLQKGHKVTK 173
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 34.7 bits (76), Expect = 0.94
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 2/115 (1%)
Frame = -3
Query: 420 RICQSEIMAPRFEIAVGLRK--GHKTTKISAGRKGITDKAIKN*AS*TKGSSNETLQVVR 247
R C+S+ A F++ RK KT + + G++ I D ++ S N ++ R
Sbjct: 30 RFCRSKCHA-NFKMKRQPRKLKWTKTHRAARGKEMIVDSSLV--LSQFAKKRNTPVKYDR 86
Query: 246 DLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQ 82
+LV + +AME ++ + +R F KRRLG + +RKREE V+A+
Sbjct: 87 NLVAATI-------KAMERVEEIRARRERAFTKRRLGGKLARERKREEDRRVVAE 134
>UniRef50_UPI00015538C3 Cluster: PREDICTED: similar to 60S ribosomal
protein L36; n=1; Mus musculus|Rep: PREDICTED: similar
to 60S ribosomal protein L36 - Mus musculus
Length = 129
Score = 33.5 bits (73), Expect = 2.2
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -3
Query: 279 GSSNETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKR 166
GS + + + + RE+ G A YE RA ELLKVSK K+
Sbjct: 82 GSLTKHTKFMWGVNREMCGFASYEWRATELLKVSKRKK 119
>UniRef50_UPI0000D569F8 Cluster: PREDICTED: similar to CG8461-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG8461-PA - Tribolium castaneum
Length = 235
Score = 33.5 bits (73), Expect = 2.2
Identities = 15/39 (38%), Positives = 26/39 (66%)
Frame = -3
Query: 216 QYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 100
Q + + ++ LK ++DK+ +KF+ RRL IR + K+E L
Sbjct: 123 QEKTQLLKQLKETEDKKKIKFVIRRLENQIREEEKKERL 161
>UniRef50_Q4T1L6 Cluster: Chromosome 1 SCAF10546, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 1
SCAF10546, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 137
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/66 (25%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = -3
Query: 282 KGSSNETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHI-RAKRKRE 106
KG++ E L + D ++GH +++ ++K+ + ALK +L + + R K +E
Sbjct: 37 KGANQEELNKLSDAYARLLGHQNQKQKIKHVIKLKDENSALKQEISKLRSQVNRLKSDQE 96
Query: 105 ELSNVL 88
+L ++L
Sbjct: 97 QLKSML 102
>UniRef50_Q00547-2 Cluster: Isoform RHAMM1 of Q00547 ; n=2;
Murinae|Rep: Isoform RHAMM1 of Q00547 - Mus musculus
(Mouse)
Length = 769
Score = 32.7 bits (71), Expect = 3.8
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -3
Query: 279 GSSNETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 100
G++ E L +RD +++GH +++ ++K+ + LK +L + + KRK+ EL
Sbjct: 671 GATQEQLNKIRDSYAQLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLRSQL-VKRKQNEL 729
>UniRef50_A1AQQ0 Cluster: Response regulator receiver protein; n=2;
Desulfuromonadales|Rep: Response regulator receiver
protein - Pelobacter propionicus (strain DSM 2379)
Length = 217
Score = 32.3 bits (70), Expect = 5.0
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -3
Query: 273 SNETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALK--FLKRRLGTHIRAKRKREEL 100
S+E L+ V L + E R +E+ V + K +KRR+ TH+ KRK ++L
Sbjct: 70 SSEELRDVPVLFLTALSEDSDELRGLEIGAVDYITKPFKTAVVKRRIDTHLALKRKTDQL 129
Query: 99 SNVLAQMRK 73
+ A++R+
Sbjct: 130 ARSNAELRE 138
>UniRef50_Q2FTZ5 Cluster: Putative uncharacterized protein; n=1;
Methanospirillum hungatei JF-1|Rep: Putative
uncharacterized protein - Methanospirillum hungatei
(strain JF-1 / DSM 864)
Length = 540
Score = 32.3 bits (70), Expect = 5.0
Identities = 18/59 (30%), Positives = 34/59 (57%)
Frame = -3
Query: 255 VVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREELSNVLAQM 79
+ R+L+ ++G + A+ LLK D + F + R+ H+ A K EE++N+LA++
Sbjct: 60 LTRELLLTLLGD---HEEAIHLLKEIDDLKKSPFSQFRIARHLGALGKHEEMNNLLARL 115
>UniRef50_A5KPW5 Cluster: Putative uncharacterized protein; n=3;
Clostridiales|Rep: Putative uncharacterized protein -
Ruminococcus torques ATCC 27756
Length = 308
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = -3
Query: 444 DRFFFFFLRICQSEIMAPRFEIAVGLRKGHKTTK--ISAGRKGITDKAIKN*AS*TKGSS 271
+ +F FF R+CQ + PR ++A+ K + I ++G+ ++N + G
Sbjct: 57 ETWFDFFARVCQYHVNFPRIDLAIDDHKPYLNIPELIRLTKQGLISSQLRNYSENASGEL 116
Query: 270 NETLQV 253
+E++ V
Sbjct: 117 SESIPV 122
>UniRef50_Q5CZ07 Cluster: Putative uncharacterized protein; n=2;
Cryptosporidium|Rep: Putative uncharacterized protein -
Cryptosporidium parvum Iowa II
Length = 458
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = -3
Query: 270 NETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREEL 100
NE + + R++ + EKR E L++ K++ L+ K + +R K+++EEL
Sbjct: 74 NEDKRRKEEEERKIKERKEREKREQEELRLKKEQEELRLKKEKEQEELRLKKEQEEL 130
>UniRef50_UPI00005A506C Cluster: PREDICTED: similar to Hyaluronan
mediated motility receptor (Intracellular hyaluronic
acid binding protein) (Receptor for hyaluronan-mediated
motility) (CD168 antigen); n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to Hyaluronan
mediated motility receptor (Intracellular hyaluronic
acid binding protein) (Receptor for hyaluronan-mediated
motility) (CD168 antigen) - Canis familiaris
Length = 609
Score = 31.5 bits (68), Expect = 8.7
Identities = 16/59 (27%), Positives = 33/59 (55%)
Frame = -3
Query: 279 GSSNETLQVVRDLVREVVGHAQYEKRAMELLKVSKDKRALKFLKRRLGTHIRAKRKREE 103
G++ E L +RD +++GH +++ ++K+ + LK +L + + AKRK+ E
Sbjct: 508 GAAQEQLNKLRDSYAKLLGHQNLKQKIKHVVKLKDENSQLKSEVSKLRSQL-AKRKQSE 565
>UniRef50_Q0UBN7 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 723
Score = 31.5 bits (68), Expect = 8.7
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +2
Query: 101 SSSRFLLARMCVPNRRFKNFR--ARLSFDTLSNSIALFSY 214
++S L+ R CV RF+ FR +R +FDTLS L SY
Sbjct: 489 TNSHDLIMRTCVTYLRFRPFRIDSRNTFDTLSARYPLLSY 528
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 393,335,067
Number of Sequences: 1657284
Number of extensions: 6773595
Number of successful extensions: 16604
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 16294
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16583
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23511729640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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