Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1434
         (332 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   0.84 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    20   5.9  
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    20   5.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       20   7.8  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    20   7.8  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.0 bits (47), Expect = 0.84
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = +2

Query: 218 YQCNGEPAGRHHLLLNFL 271
           ++C+ EP  RH+L+  F+
Sbjct: 85  FECDNEPKLRHYLIFIFV 102


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +2

Query: 119 CLPCLPISTYTKI 157
           C+P L I TYT +
Sbjct: 171 CIPQLTIFTYTSV 183


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 20.2 bits (40), Expect = 5.9
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +1

Query: 73  PXPMDXXNARSKAKPLPTMPTNI 141
           P P       S+ KP P  PT +
Sbjct: 251 PTPKPRPTKVSRRKPRPPRPTQV 273


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +2

Query: 47  TAHLVVSGYRRPWTXXMPGAKPS 115
           T H+   G+  P+T  M G + S
Sbjct: 487 TIHMGYHGFHNPFTCNMCGVECS 509


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 19.8 bits (39), Expect = 7.8
 Identities = 7/26 (26%), Positives = 13/26 (50%)
 Frame = -3

Query: 312 KITFKTREAAETFKRKFNNKWWRPAG 235
           ++ F+TR   +   +   NKW+   G
Sbjct: 68  RVRFQTRVKVQEGSKSGRNKWFFQKG 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,049
Number of Sequences: 336
Number of extensions: 1355
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6473381
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)