Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1434
         (332 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    21   5.2  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                20   6.8  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    20   9.1  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
          monooxygenase protein.
          Length = 517

 Score = 20.6 bits (41), Expect = 5.2
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 39 TSVRPTWW*VVTXAH 83
          TS RP WW     +H
Sbjct: 23 TSHRPAWWFWTATSH 37


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.2 bits (40), Expect = 6.8
 Identities = 10/38 (26%), Positives = 16/38 (42%)
 Frame = +2

Query: 107 KPSRCLPCLPISTYTKIYWGNNYKSPPTAGLDGRASLY 220
           K +R  P   I +   + W   ++  P AGL     +Y
Sbjct: 227 KQNRPTPAADIYSLGIVAWQMLFRKLPFAGLHSHTIIY 264


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.8 bits (39), Expect = 9.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 279 TFKRKFNNKWWRPAG 235
           TF  K + KW+ P+G
Sbjct: 231 TFLCKGDGKWYLPSG 245


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,944
Number of Sequences: 438
Number of extensions: 1797
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7466580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)