Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1433
         (671 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    26   0.32 
AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.       26   0.32 
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.9  

>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 15/51 (29%), Positives = 23/51 (45%)
 Frame = +2

Query: 374 KVIAPAHKVLVSAHHEEEYAHPKYDFAYSVADGHSGDNKFQHESRTATLCT 526
           K+   A  +L+S H  E        F  S A   +G+  F+ ++  A LCT
Sbjct: 4   KLCLLASALLISTHQTEAKTDKILCFFASWAGYRNGEGSFKPQNINANLCT 54


>AF225975-1|AAF74117.1|  256|Tribolium castaneum unknown protein.
          Length = 256

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 13/21 (61%), Positives = 15/21 (71%), Gaps = 1/21 (4%)
 Frame = +1

Query: 526 GEYTLVEAD-GSVRKVEYTAD 585
           GEY +V  D GS+R V YTAD
Sbjct: 218 GEYGVVSHDDGSLRGVRYTAD 238


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = -2

Query: 409 RYKHFVGGSN 380
           R+KHFVG  N
Sbjct: 253 RFKHFVGADN 262


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,037
Number of Sequences: 336
Number of extensions: 1658
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)