Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1432
         (541 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   1.7  
AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450 ...    23   2.3  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   4.0  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.2  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.2  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.2  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   9.2  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 346 IXTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 441
           + T+W + E+I++     +L V     PV+LT
Sbjct: 158 VVTDWVNFERIYYKLTKKKLSVFFGNKPVILT 189


>AF263514-1|AAF74206.1|  127|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 306 KXYPDPQIPHRTRNRH 353
           K  PD  +P RT NRH
Sbjct: 107 KFDPDNFLPERTANRH 122


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -1

Query: 109 KLVRCRCDKMKIKRPAVTANREKQIP 32
           K  R   D+ ++ RPA  ANR    P
Sbjct: 330 KRPRPNIDRHEVTRPAAPANRGNGFP 355


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -3

Query: 191 LRSRP-CTXRSHCLLPTRQLLGRT 123
           ++ +P C+  + C L TR+L G T
Sbjct: 477 IKGQPYCSLPNSCALTTRELPGET 500


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/24 (37%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = -3

Query: 191 LRSRP-CTXRSHCLLPTRQLLGRT 123
           ++ +P C+  + C L TR+L G T
Sbjct: 484 IKGQPYCSLPNSCALTTRELPGET 507


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.2
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = -1

Query: 430 RGVPRGRHAAHCRRYDAKSSP 368
           RG P    AA C +   KS P
Sbjct: 33  RGTPLAMLAAQCNKLSNKSPP 53


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +2

Query: 218 PXXXGRPRHXGVRXVWDR 271
           P   G+P H  V  VW++
Sbjct: 9   PEMMGKPIHEEVAQVWEQ 26


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,467
Number of Sequences: 336
Number of extensions: 2374
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13201902
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)