Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1432
(541 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 180 8e-46
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 180 8e-46
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 180 8e-46
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 180 8e-46
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 180 8e-46
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 180 8e-46
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 180 8e-46
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 180 8e-46
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 180 8e-46
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 179 1e-45
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 178 2e-45
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 107 5e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 89 2e-18
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 88 3e-18
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 84 7e-17
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 84 7e-17
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 84 7e-17
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 82 3e-16
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 61 6e-10
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 35 0.043
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 35 0.043
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 8.6
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 8.6
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 8.6
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 8.6
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 180 bits (437), Expect = 8e-46
Identities = 82/95 (86%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD EVAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 180 bits (437), Expect = 8e-46
Identities = 82/95 (86%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD +VAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 180 bits (437), Expect = 8e-46
Identities = 82/95 (86%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD EVAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 180 bits (437), Expect = 8e-46
Identities = 82/95 (86%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD EVAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 180 bits (437), Expect = 8e-46
Identities = 82/95 (86%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD EVAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 180 bits (437), Expect = 8e-46
Identities = 82/95 (86%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 80.2 bits (189), Expect = 9e-16
Identities = 34/44 (77%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD +VAAL++DNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 180 bits (437), Expect = 8e-46
Identities = 82/95 (86%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD EVAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 180 bits (437), Expect = 8e-46
Identities = 82/95 (86%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 23 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 82
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 83 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 117
Score = 47.6 bits (108), Expect = 6e-06
Identities = 20/26 (76%), Positives = 21/26 (80%)
Frame = +2
Query: 176 KAGFAGDDAPXAVFPXXXGRPRHXGV 253
+AGFAGDDAP AVFP GRPRH GV
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGV 30
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 180 bits (437), Expect = 8e-46
Identities = 82/95 (86%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 96
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 97 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 131
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD EVAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 179 bits (435), Expect = 1e-45
Identities = 80/85 (94%), Positives = 81/85 (95%)
Frame = +1
Query: 259 GMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLL 438
GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELRVAPEEHPVLL
Sbjct: 3 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 62
Query: 439 TEAPLNPKANREKMTXIMFETFNSP 513
TEAPLNPKANREKMT IMFETFN+P
Sbjct: 63 TEAPLNPKANREKMTQIMFETFNTP 87
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 178 bits (433), Expect = 2e-45
Identities = 80/95 (84%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 95
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
+APEEHPVLLTEAPLNPK+NREKMT IMFETFN+P
Sbjct: 96 IAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTP 130
Score = 76.2 bits (179), Expect = 1e-14
Identities = 33/42 (78%), Positives = 36/42 (85%)
Frame = +2
Query: 128 DQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
++E+AALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 43
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 107 bits (257), Expect = 5e-24
Identities = 45/81 (55%), Positives = 60/81 (74%), Gaps = 1/81 (1%)
Frame = +1
Query: 274 DSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAP 450
D ++G +A S R + +++YP+EHGI NW DMEKIW + F ++L++ PEEHPVLLT+AP
Sbjct: 54 DIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAP 113
Query: 451 LNPKANREKMTXIMFETFNSP 513
LNP NRE+ I FETFN P
Sbjct: 114 LNPLKNRERSAEIFFETFNVP 134
Score = 41.9 bits (94), Expect = 3e-04
Identities = 18/36 (50%), Positives = 23/36 (63%)
Frame = +2
Query: 146 LVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
+V+DNGSG KAGFAG+ P F GRP++ V
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRV 46
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 88.6 bits (210), Expect = 2e-18
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +1
Query: 271 KDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 447
KD VG+E R +L + YP+++GI NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 448 PLNPKANREKMTXIMFETF 504
PLNP +NREKM +MFE +
Sbjct: 113 PLNPNSNREKMFQVMFEQY 131
Score = 40.7 bits (91), Expect = 7e-04
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRP 238
M Q +VVDNG+G K G+AG + P +FP GRP
Sbjct: 1 MDSQGRKVIVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 88.2 bits (209), Expect = 3e-18
Identities = 42/86 (48%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
Frame = +1
Query: 259 GMGQKDSYVGDEAXSKRXI-LTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVL 435
G+ D ++GDEA S T+KYPI HGI +WD ME+ W + LR PE+H L
Sbjct: 59 GIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFL 118
Query: 436 LTEAPLNPKANREKMTXIMFETFNSP 513
LTE PLN NRE IMFE+FN P
Sbjct: 119 LTEPPLNTPENREYTAEIMFESFNVP 144
Score = 33.5 bits (73), Expect = 0.100
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFP 220
M ++ A V+DNG+G K G+AG+ P + P
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIP 33
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 83.8 bits (198), Expect = 7e-17
Identities = 39/50 (78%), Positives = 40/50 (80%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKI 378
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD +VAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 83.8 bits (198), Expect = 7e-17
Identities = 39/50 (78%), Positives = 40/50 (80%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKI 378
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD EVAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 83.8 bits (198), Expect = 7e-17
Identities = 39/50 (78%), Positives = 40/50 (80%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKI 378
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDMEKI
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/44 (84%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD EVAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 81.8 bits (193), Expect = 3e-16
Identities = 36/44 (81%), Positives = 37/44 (84%)
Frame = +2
Query: 122 MCDQEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
MCD +VAALVVDNGSG CKAGFAGDDAP AVFP GRPRH GV
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGV 44
Score = 78.2 bits (184), Expect = 4e-15
Identities = 36/47 (76%), Positives = 37/47 (78%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDM 369
G+ G GMGQKDSYVGDEA SKR ILTLKYPIEHGI TNWDDM
Sbjct: 37 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 60.9 bits (141), Expect = 6e-10
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +1
Query: 334 IEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
++ G+ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 134 EVAALVVDNGSGXCKAGFAGDDAPXAVFP 220
EV+ LV D GS + GFAG++ P P
Sbjct: 10 EVSGLVFDAGSQSFRVGFAGEEYPKGDIP 38
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.043
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 292 EAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 471
E S + L PIE G NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALP 107
Query: 472 EKMTXIMFETF 504
+ + I+F+ F
Sbjct: 108 DVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.043
Identities = 21/71 (29%), Positives = 31/71 (43%)
Frame = +1
Query: 292 EAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 471
E S + L PIE G NWD ++IW TF + V + LT+ A
Sbjct: 49 EECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALP 107
Query: 472 EKMTXIMFETF 504
+ + I+F+ F
Sbjct: 108 DVSSEILFDYF 118
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 201 ASSPAKPALHXPEPLSTTNAATS 133
+SSPA P++ P P +T++ +TS
Sbjct: 652 SSSPATPSISGPPPCATSSGSTS 674
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 201 ASSPAKPALHXPEPLSTTNAATS 133
+SSPA P++ P P +T++ +TS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTS 675
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 201 ASSPAKPALHXPEPLSTTNAATS 133
+SSPA P++ P P +T++ +TS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTS 675
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.1 bits (57), Expect = 8.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = -2
Query: 201 ASSPAKPALHXPEPLSTTNAATS 133
+SSPA P++ P P +T++ +TS
Sbjct: 653 SSSPATPSISGPPPCATSSGSTS 675
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,157,345
Number of Sequences: 27780
Number of extensions: 241526
Number of successful extensions: 607
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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