Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1432
(541 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 177 5e-45
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 176 7e-45
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 176 7e-45
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 176 9e-45
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 176 9e-45
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 175 1e-44
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 175 2e-44
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 175 2e-44
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 175 2e-44
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 155 1e-38
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 146 6e-36
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 144 4e-35
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 97 9e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 86 2e-17
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 75 2e-14
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 66 1e-11
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 48 4e-06
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 47 7e-06
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 40 0.001
At1g16690.2 68414.m01999 transcription factor-related similar to... 30 1.1
At1g16690.1 68414.m01998 transcription factor-related similar to... 30 1.1
At2g22330.1 68415.m02649 cytochrome P450, putative similar to cy... 29 2.0
At3g07870.1 68416.m00962 F-box family protein contains F-box dom... 24 5.4
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 177 bits (430), Expect = 5e-45
Identities = 80/95 (84%), Positives = 84/95 (88%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKD+YVGDEA SKR ILTLKYPIEHGI +NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 132
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +2
Query: 131 QEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
+++ LV DNG+G KAGFAGDDAP AVFP GRPRH GV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV 45
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 176 bits (429), Expect = 7e-45
Identities = 80/95 (84%), Positives = 83/95 (87%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKD+YVGDEA SKR ILTLKYPIEHGI NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 132
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +2
Query: 131 QEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
+++ LV DNG+G KAGFAGDDAP AVFP GRPRH GV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV 45
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 176 bits (429), Expect = 7e-45
Identities = 80/95 (84%), Positives = 83/95 (87%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKD+YVGDEA SKR ILTLKYPIEHGI NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 132
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +2
Query: 131 QEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
+++ LV DNG+G KAGFAGDDAP AVFP GRPRH GV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV 45
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 176 bits (428), Expect = 9e-45
Identities = 79/95 (83%), Positives = 83/95 (87%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKD+YVGDEA SKR ILTLKYPIEHGI NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHP+LLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 98 VAPEEHPILLTEAPLNPKANREKMTQIMFETFNAP 132
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +2
Query: 131 QEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
+++ LV DNG+G KAGFAGDDAP AVFP GRPRH GV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV 45
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 176 bits (428), Expect = 9e-45
Identities = 79/95 (83%), Positives = 83/95 (87%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKD+YVGDEA SKR ILTLKYPIEHGI NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 97
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHP+LLTEAPLNPKANREKMT IMFETFN+P
Sbjct: 98 VAPEEHPILLTEAPLNPKANREKMTQIMFETFNAP 132
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +2
Query: 131 QEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
+++ LV DNG+G KAGFAGDDAP AVFP GRPRH GV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV 45
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 175 bits (427), Expect = 1e-44
Identities = 80/95 (84%), Positives = 83/95 (87%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GMGQKD+YVGDEA SKR ILTLKYPIEHGI +NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR 97
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
VAPEEHPVLLTEAPLNPKANREKMT IMFETFN P
Sbjct: 98 VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVP 132
Score = 62.9 bits (146), Expect = 1e-10
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +2
Query: 131 QEVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
+++ LV DNG+G KAGFAGDDAP AVFP GRPRH GV
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGV 45
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 175 bits (425), Expect = 2e-44
Identities = 78/95 (82%), Positives = 83/95 (87%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GM QKD+YVGDEA SKR ILTLKYPIEHG+ +NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
+APEEHPVLLTEAPLNPKANREKMT IMFETFNSP
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 132
Score = 61.3 bits (142), Expect = 4e-10
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 134 EVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
++ +V DNG+G KAGFAGDDAP AVFP GRPRH GV
Sbjct: 6 DIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGV 45
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 175 bits (425), Expect = 2e-44
Identities = 78/95 (82%), Positives = 83/95 (87%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GM QKD+YVGDEA SKR ILTLKYPIEHG+ +NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
+APEEHPVLLTEAPLNPKANREKMT IMFETFNSP
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 132
Score = 61.3 bits (142), Expect = 4e-10
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 134 EVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
++ +V DNG+G KAGFAGDDAP AVFP GRPRH GV
Sbjct: 6 DIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGV 45
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 175 bits (425), Expect = 2e-44
Identities = 78/95 (82%), Positives = 83/95 (87%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GM QKD+YVGDEA SKR ILTLKYPIEHG+ +NWDDMEKIWHHTFYNELR
Sbjct: 38 GRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELR 97
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
+APEEHPVLLTEAPLNPKANREKMT IMFETFNSP
Sbjct: 98 IAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSP 132
Score = 61.3 bits (142), Expect = 4e-10
Identities = 26/40 (65%), Positives = 30/40 (75%)
Frame = +2
Query: 134 EVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGV 253
++ +V DNG+G KAGFAGDDAP AVFP GRPRH GV
Sbjct: 6 DIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGV 45
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 155 bits (377), Expect = 1e-38
Identities = 67/95 (70%), Positives = 79/95 (83%)
Frame = +1
Query: 229 GKAPPXGREXGMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELR 408
G+ G GM +KD++VGDEA ++R IL+LKYPIEHG+ +NWDDMEKIWHHTFYNELR
Sbjct: 39 GRPRHRGVMVGMDEKDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELR 98
Query: 409 VAPEEHPVLLTEAPLNPKANREKMTXIMFETFNSP 513
+ PEEHP+LLTEAPLNPK NREKMT IMFE+F P
Sbjct: 99 LEPEEHPILLTEAPLNPKVNREKMTQIMFESFAFP 133
Score = 63.7 bits (148), Expect = 8e-11
Identities = 29/47 (61%), Positives = 32/47 (68%)
Frame = +2
Query: 134 EVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRHXGVRXVWDRR 274
E A+V DNG+G KAGFAGDDAP AVFP GRPRH GV D +
Sbjct: 7 ESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 146 bits (355), Expect = 6e-36
Identities = 63/85 (74%), Positives = 74/85 (87%)
Frame = +1
Query: 259 GMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLL 438
GM + D +VGD+A ++ ILTL YP+EHG+ +NWDDMEKIW+HTFY+ELRVAPEEHPVLL
Sbjct: 3 GMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLL 62
Query: 439 TEAPLNPKANREKMTXIMFETFNSP 513
TEAPLNPKA+REKMT IMFETF P
Sbjct: 63 TEAPLNPKADREKMTQIMFETFAVP 87
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 144 bits (348), Expect = 4e-35
Identities = 63/85 (74%), Positives = 71/85 (83%)
Frame = +1
Query: 259 GMGQKDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLL 438
G+ +SYVG+E + R ILTLK P+EHGI NWDDMEKIWH+TFYNELRV PEEHPVLL
Sbjct: 37 GLNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHPVLL 96
Query: 439 TEAPLNPKANREKMTXIMFETFNSP 513
TEAP NPKANREKMT IMFE+F+ P
Sbjct: 97 TEAPYNPKANREKMTQIMFESFDVP 121
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/32 (59%), Positives = 22/32 (68%)
Frame = +2
Query: 146 LVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPR 241
+V D G G +AGFAGD+AP VFP GRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 96.7 bits (230), Expect = 9e-21
Identities = 40/79 (50%), Positives = 51/79 (64%)
Frame = +1
Query: 271 KDSYVGDEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 450
KD VG+ R L + YP+ +GI NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 451 LNPKANREKMTXIMFETFN 507
LNP NREKM MFE +N
Sbjct: 111 LNPSKNREKMIETMFEKYN 129
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 146 LVVDNGSGXCKAGFAGDDAPXAVFPXXXGRP 238
+V DNG+G K GFAG++ P +VFP GRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 85.8 bits (203), Expect = 2e-17
Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +1
Query: 274 DSYVGDEAXSK-RXILT--LKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 444
D Y+GDEA +K R T L YPIEHG +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 445 APLNPKANREKMTXIMFETFNSP 513
+PL P +RE I+FETFN P
Sbjct: 127 SPLTPPESREYTGEILFETFNVP 149
Score = 33.5 bits (73), Expect = 0.092
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +2
Query: 143 ALVVDNGSGXCKAGFAGDDAPXAVFP 220
A+V+DNG+G K GFAG+ P + P
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILP 33
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 75.4 bits (177), Expect = 2e-14
Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Frame = +1
Query: 253 EXGMGQKDSYVGDEAXS-KRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHP 429
E ++ YVG +A S +R + + PI+ GI ++WD ++ IW H F + L + P EHP
Sbjct: 67 EKEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHP 126
Query: 430 VLLTEAPLNPKANREKMTXIMFETFNSPPCTSPSKP 537
+LL E PLN + REK +MFE + P P
Sbjct: 127 MLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNP 162
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +2
Query: 134 EVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXG 232
EV+A+VVD GS CKAG+AG+DAP AVFP G
Sbjct: 6 EVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 66.5 bits (155), Expect = 1e-11
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Frame = +1
Query: 265 GQKDSYVGDEAXS-KRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 441
G++ Y G +A + +R + + P + GI T+WD ++ +W H F N L + P EHP+LL
Sbjct: 65 GKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLA 124
Query: 442 EAPLNPKANREK 477
E PLN + REK
Sbjct: 125 EPPLNSQQQREK 136
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/33 (66%), Positives = 26/33 (78%)
Frame = +2
Query: 134 EVAALVVDNGSGXCKAGFAGDDAPXAVFPXXXG 232
EV+A+VVD GS CKAG+AG+DAP AVFP G
Sbjct: 6 EVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/60 (40%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = +1
Query: 331 PIEHGIXTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTXIMFETFN 507
PIE G+ +WD ME + + Y L E +L T+ PKA RE++ +MFETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 47.2 bits (107), Expect = 7e-06
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +1
Query: 322 LKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTXIMFET 501
++ PI+ G N D +IW H F + L +AP +LLTEAPL+ + + ++FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 502 F 504
F
Sbjct: 121 F 121
Score = 29.9 bits (64), Expect = 1.1
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 146 LVVDNGSGXCKAGFAGDDAPXAVFPXXXGRP 238
+V+DNG G KAG G+ P V P +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 39.5 bits (88), Expect = 0.001
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 331 PIEHGIXTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTXIMFETFN 507
P + + ++ ME I + F + +HP+L+TE NP +R KM ++FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 508 SP 513
P
Sbjct: 145 VP 146
Score = 35.1 bits (77), Expect = 0.030
Identities = 14/33 (42%), Positives = 20/33 (60%)
Frame = +2
Query: 146 LVVDNGSGXCKAGFAGDDAPXAVFPXXXGRPRH 244
+V+DNG+ + G+AG+ P VF RPRH
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRH 54
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 289 DEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 468
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 469 REK 477
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.9 bits (64), Expect = 1.1
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +1
Query: 289 DEAXSKRXILTLKYPIEHGIXTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 468
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 469 REK 477
REK
Sbjct: 225 REK 227
>At2g22330.1 68415.m02649 cytochrome P450, putative similar to
cytochrome P450 79B2 (SP:O81346) [Arabidopsis thaliana]
Length = 543
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 369 HVIPVSXDSVFDGVFEGQDTSFAXCLISYIRVLLSH 262
HVIPV+ + +F+ QD FA ++Y + +LS+
Sbjct: 104 HVIPVTCPKIAREIFKQQDALFASRPLTYAQKILSN 139
>At3g07870.1 68416.m00962 F-box family protein contains F-box domain
Pfam:PF00646
Length = 417
Score = 24.2 bits (50), Expect(2) = 5.4
Identities = 11/31 (35%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Frame = -2
Query: 243 WRGLPXXXGNTAXGASSPAKPA--LHXPEPL 157
WR + G + +SSP KP LH P+
Sbjct: 55 WRSVLTQHGRLSSSSSSPTKPCLLLHCDSPI 85
Score = 21.8 bits (44), Expect(2) = 5.4
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -2
Query: 432 DGVFLGGDTQLIVEGMMPNLLHVIPVS 352
DGV +GG + + E ++ ++ +P+S
Sbjct: 17 DGVGVGGGLESLPEDIIADIFSRLPIS 43
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,565,089
Number of Sequences: 28952
Number of extensions: 224226
Number of successful extensions: 516
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1003808112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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