Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1428
         (539 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2DBY0 Cluster: Putative uncharacterized protein; n=1; ...    37   0.34 
UniRef50_Q8I409 Cluster: Putative uncharacterized protein PFE047...    33   4.2  
UniRef50_UPI00006CA674 Cluster: hypothetical protein TTHERM_0064...    33   5.6  
UniRef50_Q23F06 Cluster: Putative uncharacterized protein; n=1; ...    32   9.7  

>UniRef50_A2DBY0 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 847

 Score = 36.7 bits (81), Expect = 0.34
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = -2

Query: 373 VLTKYANE*CGWLQENDKKFIKKTFIKYENSYHKSKK----NRFIFTMLYY 233
           +L  Y N+ C WLQ NDKK I K  +   +++  SKK    + F+ + L Y
Sbjct: 363 ILDNYGNDICNWLQSNDKKAIYKALLLL-HAFVSSKKTIIFSEFVISQLQY 412


>UniRef50_Q8I409 Cluster: Putative uncharacterized protein PFE0470w;
           n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein PFE0470w - Plasmodium falciparum
           (isolate 3D7)
          Length = 444

 Score = 33.1 bits (72), Expect = 4.2
 Identities = 11/36 (30%), Positives = 23/36 (63%)
 Frame = +1

Query: 115 YFQSRSCIKYYPNINVICVKFRVQILLNKKNYTEHY 222
           +++     K Y N+ +IC+   ++ +LN+ +YTE+Y
Sbjct: 222 FYKIEKLQKEYRNVRIICILIGIREILNRVDYTENY 257


>UniRef50_UPI00006CA674 Cluster: hypothetical protein
           TTHERM_00647070; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00647070 - Tetrahymena
           thermophila SB210
          Length = 970

 Score = 32.7 bits (71), Expect = 5.6
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
 Frame = -2

Query: 409 TFQLFRIEGLFYVLT--KYANE*CGWLQENDKKFIKKTFIKYENSYHKSKKNRFIFTMLY 236
           +F + R      VLT  K +++ C W  E D   IKK  + YENS  KSK+  F  T +Y
Sbjct: 390 SFSMNRANDWANVLTCHKESDKPCIWSSE-DHSIIKKDLVLYENS--KSKEQNFQITTVY 446


>UniRef50_Q23F06 Cluster: Putative uncharacterized protein; n=1;
            Tetrahymena thermophila SB210|Rep: Putative
            uncharacterized protein - Tetrahymena thermophila SB210
          Length = 2988

 Score = 31.9 bits (69), Expect = 9.7
 Identities = 13/44 (29%), Positives = 24/44 (54%)
 Frame = -2

Query: 343  GWLQENDKKFIKKTFIKYENSYHKSKKNRFIFTMLYYQAYCNVR 212
            G+L EN  ++IK+    +E      K N + F  L+++  CN++
Sbjct: 2256 GFLSENKVQYIKEVQEDFEKIEKAEKANNYYFEELHFKCSCNMK 2299


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 442,639,989
Number of Sequences: 1657284
Number of extensions: 7330201
Number of successful extensions: 15068
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15063
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 34572633001
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)