Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1428
         (539 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    28   0.17 
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    26   0.70 
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    24   3.7  
DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein O-fucosylt...    23   8.7  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   8.7  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 12/22 (54%), Positives = 17/22 (77%)
 Frame = +3

Query: 294 FINVFLINFLSFSCSHPHYSFA 359
           FI +FL++F+ FS S P +SFA
Sbjct: 55  FIFMFLLHFVLFSFSFPFFSFA 76


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 26.2 bits (55), Expect = 0.70
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = -3

Query: 336  YKRTIRNLLKKHL*NTRIVIISLRKIGLF 250
            + + I N+LK H  N++ +I+SL K G+F
Sbjct: 1121 HTQNIGNMLKAHFTNSQFIIVSL-KDGMF 1148


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 23.8 bits (49), Expect = 3.7
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 450 SNVVRYYLRIAPDRHFNCFALKA 382
           S++ R+YL+    + +NCF  KA
Sbjct: 104 SDIDRHYLQYGLGQDYNCFRQKA 126


>DQ139954-1|ABA29475.1|  451|Anopheles gambiae protein
           O-fucosyltransferase 2 protein.
          Length = 451

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = +1

Query: 112 DYFQSRSCIKYYPNINVICVKFRVQIL 192
           DY+++R  +++ P +  +  +FR + L
Sbjct: 249 DYWEARRSMRFAPPLVDVATRFRAEYL 275


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 22.6 bits (46), Expect = 8.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 322 KKFIKKTFIKYENSYHKSKKNR 257
           +KF K   +   N++H  K NR
Sbjct: 129 EKFTKSECVNIRNNFHLPKSNR 150


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,340
Number of Sequences: 2352
Number of extensions: 8619
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 50320221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)