Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1427
         (718 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    29   0.19 
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   1.8  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   1.8  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   1.8  
AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    25   1.8  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    25   2.3  
AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid transpo...    23   7.2  

>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +2

Query: 500 KKRESAIEALKEYEPEMGKVIRGDKSGVQKIRAKE 604
           K++E A E LKE + E+GK+ R      Q+IR  E
Sbjct: 264 KRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVE 298


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = -1

Query: 493 HTPTTALAIRISKITKGSTKAENASSCSSNKANTNEIIAANSKILTKRSSNCSKTNCH 320
           ++  T   +R  +I     + ++  + SSN +N N   ++N+   T  S+N +  + H
Sbjct: 169 YSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNNNNSLH 226


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = -1

Query: 493 HTPTTALAIRISKITKGSTKAENASSCSSNKANTNEIIAANSKILTKRSSNCSKTNCH 320
           ++  T   +R  +I     + ++  + SSN +N N   ++N+   T  S+N +  + H
Sbjct: 169 YSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNNNNSLH 226


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = -1

Query: 493 HTPTTALAIRISKITKGSTKAENASSCSSNKANTNEIIAANSKILTKRSSNCSKTNCH 320
           ++  T   +R  +I     + ++  + SSN +N N   ++N+   T  S+N +  + H
Sbjct: 121 YSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSSNNNNNTISSNNNNNNSLH 178


>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 4/47 (8%)
 Frame = +3

Query: 420 DAFSAFVEPFVILLILIANAVVGVWQ----ERNANLPSKL*KNTNLK 548
           D    FV PF I+++L +     VW+     RN  LP +   N  ++
Sbjct: 207 DTVIVFVVPFTIIVVLNSVTSFTVWRFAGLRRNMTLPKRKPSNLEIR 253


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/58 (22%), Positives = 27/58 (46%)
 Frame = -1

Query: 493 HTPTTALAIRISKITKGSTKAENASSCSSNKANTNEIIAANSKILTKRSSNCSKTNCH 320
           ++  T   +R  +I     + ++  + SSN +N N   + N+   T  S+N +  + H
Sbjct: 169 YSADTDSKLRSERIRDSRDERDSLPNASSNNSNNNNNSSGNNNNNTISSNNNNNNSLH 226


>AF543192-1|AAN40409.1|  636|Anopheles gambiae amino acid
           transporter Ag_AAT8 protein.
          Length = 636

 Score = 23.4 bits (48), Expect = 7.2
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = +3

Query: 417 EDAFSAFVEPFVILLILIANAV 482
           E+   AFV P++I+L+L+   V
Sbjct: 111 ENGGGAFVIPYIIVLLLVGKPV 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,309
Number of Sequences: 2352
Number of extensions: 12558
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 72765525
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)