Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1425
         (596 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   5.7  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   5.7  
AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against p...    23   7.5  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    23   7.5  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    23   7.5  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 119  NILPLVKGLFYQDFGRHCYLLLFHRGEP 36
            N L L K +  Q   RH Y   +H  EP
Sbjct: 2073 NSLGLPKRVLIQPNSRHAYQRTYHYNEP 2100


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = -1

Query: 119  NILPLVKGLFYQDFGRHCYLLLFHRGEP 36
            N L L K +  Q   RH Y   +H  EP
Sbjct: 2074 NSLGLPKRVLIQPNSRHAYQRTYHYNEP 2101


>AY423354-1|AAQ94040.1|  112|Anopheles gambiae defender against
           programmed cell death protein.
          Length = 112

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 7/11 (63%), Positives = 11/11 (100%)
 Frame = -1

Query: 479 AGFLSTIACFM 447
           AGF+ST++CF+
Sbjct: 57  AGFISTVSCFV 67


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +2

Query: 362 VKTMSTDLPPFELCVASQTVQCCKLLRGT 448
           + T+S     FE+ V +  + CC+ L  T
Sbjct: 5   ITTLSAGAKVFEVVVQNSLLNCCRSLIST 33


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +3

Query: 312  GTRCDHCDFFTYEGHDG 362
            G RCD C    Y+ H G
Sbjct: 1013 GRRCDRCKENKYDRHQG 1029


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 630,711
Number of Sequences: 2352
Number of extensions: 12695
Number of successful extensions: 29
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)