Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1425
(596 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein comple... 127 3e-29
AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop ... 127 3e-29
AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein. 127 3e-29
BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein. 120 5e-27
BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein. 120 5e-27
AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens ... 120 5e-27
AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP... 120 5e-27
AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protei... 120 5e-27
AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein. 120 5e-27
U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein. 34 0.33
BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein... 34 0.33
AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B sub... 34 0.33
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 33 0.77
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 33 0.77
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 33 0.77
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 33 0.77
U72395-1|AAB68948.1| 890|Homo sapiens MIP protein. 31 4.1
U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein. 31 4.1
U70322-1|AAC50723.1| 890|Homo sapiens transportin protein. 31 4.1
BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein. 31 4.1
BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein. 31 4.1
BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin... 30 7.2
AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homo... 30 7.2
AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein p... 30 7.2
>BC066650-1|AAH66650.1| 874|Homo sapiens coatomer protein complex,
subunit gamma protein.
Length = 874
Score = 127 bits (306), Expect = 3e-29
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 259 DVXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 438
D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RALC ITDSTMLQAI
Sbjct: 81 DPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAI 140
Query: 439 ERYMKQAIVDKNPAVGSAALVSA 507
ERYMKQAIVDK P+V S+ALVS+
Sbjct: 141 ERYMKQAIVDKVPSVSSSALVSS 163
Score = 97.9 bits (233), Expect = 2e-20
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
Frame = +2
Query: 32 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGXX 199
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQG
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 200 LTTQEATDIFFATTKLFQ 253
L T EAT+ FFA TKLFQ
Sbjct: 61 LGTTEATEAFFAMTKLFQ 78
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
W+NEAQEA +SD++MV
Sbjct: 177 WVNEAQEAASSDNIMV 192
>AF100756-1|AAD43020.1| 874|Homo sapiens coat protein gamma-cop
protein.
Length = 874
Score = 127 bits (306), Expect = 3e-29
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 259 DVXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 438
D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RALC ITDSTMLQAI
Sbjct: 81 DPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAI 140
Query: 439 ERYMKQAIVDKNPAVGSAALVSA 507
ERYMKQAIVDK P+V S+ALVS+
Sbjct: 141 ERYMKQAIVDKVPSVSSSALVSS 163
Score = 97.9 bits (233), Expect = 2e-20
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
Frame = +2
Query: 32 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGXX 199
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQG
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 200 LTTQEATDIFFATTKLFQ 253
L T EAT+ FFA TKLFQ
Sbjct: 61 LGTTEATEAFFAMTKLFQ 78
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
W+NEAQEA +SD++MV
Sbjct: 177 WVNEAQEAASSDNIMV 192
>AB047846-1|BAB17657.1| 874|Homo sapiens gamma1-COP protein.
Length = 874
Score = 127 bits (306), Expect = 3e-29
Identities = 63/83 (75%), Positives = 72/83 (86%)
Frame = +1
Query: 259 DVXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 438
D LRR+ YL IKE+S +A+DVIIVTSSLTKDMTGK+D YR A+RALC ITDSTMLQAI
Sbjct: 81 DPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKEDNYRGPAVRALCQITDSTMLQAI 140
Query: 439 ERYMKQAIVDKNPAVGSAALVSA 507
ERYMKQAIVDK P+V S+ALVS+
Sbjct: 141 ERYMKQAIVDKVPSVSSSALVSS 163
Score = 97.9 bits (233), Expect = 2e-20
Identities = 48/78 (61%), Positives = 59/78 (75%), Gaps = 4/78 (5%)
Frame = +2
Query: 32 MKARRDGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGXX 199
M + D K+E+S N FQ+L+K+ +LQEAR FN TP++PRKC HILTKILYL+NQG
Sbjct: 1 MLKKFDKKDEESGGGSNPFQHLEKSAVLQEARVFNETPINPRKCAHILTKILYLINQGEH 60
Query: 200 LTTQEATDIFFATTKLFQ 253
L T EAT+ FFA TKLFQ
Sbjct: 61 LGTTEATEAFFAMTKLFQ 78
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
W+NEAQEA +SD++MV
Sbjct: 177 WVNEAQEAASSDNIMV 192
>BC110796-1|AAI10797.1| 726|Homo sapiens COPG2 protein protein.
Length = 726
Score = 120 bits (288), Expect = 5e-27
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +1
Query: 259 DVXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 438
D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAI
Sbjct: 81 DQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 140
Query: 439 ERYMKQAIVDKNPAVGSAALVSA 507
ERYMKQAIVDK +V S+ALVS+
Sbjct: 141 ERYMKQAIVDKVSSVSSSALVSS 163
Score = 95.5 bits (227), Expect = 1e-19
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Frame = +2
Query: 47 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGXXLTTQE 214
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQG T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 215 ATDIFFATTKLFQ 253
AT+ FFA T+LFQ
Sbjct: 66 ATEAFFAMTRLFQ 78
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
WINEAQEA +SD++MV
Sbjct: 177 WINEAQEAASSDNIMV 192
>BC017443-1|AAH17443.2| 865|Homo sapiens COPG2 protein protein.
Length = 865
Score = 120 bits (288), Expect = 5e-27
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +1
Query: 259 DVXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 438
D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAI
Sbjct: 75 DQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 134
Query: 439 ERYMKQAIVDKNPAVGSAALVSA 507
ERYMKQAIVDK +V S+ALVS+
Sbjct: 135 ERYMKQAIVDKVSSVSSSALVSS 157
Score = 95.1 bits (226), Expect = 2e-19
Identities = 42/63 (66%), Positives = 52/63 (82%)
Frame = +2
Query: 65 SNVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGXXLTTQEATDIFFATTK 244
SN FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQG T EAT+ FFA T+
Sbjct: 10 SNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTEATEAFFAMTR 69
Query: 245 LFQ 253
LFQ
Sbjct: 70 LFQ 72
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
WINEAQEA +SD++MV
Sbjct: 171 WINEAQEAASSDNIMV 186
>AK022934-1|BAB14315.1| 799|Homo sapiens protein ( Homo sapiens
cDNA FLJ12872 fis, clone NT2RP2003760, highly similar to
COATOMER GAMMA SUBUNIT. ).
Length = 799
Score = 120 bits (288), Expect = 5e-27
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +1
Query: 259 DVXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 438
D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAI
Sbjct: 9 DQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 68
Query: 439 ERYMKQAIVDKNPAVGSAALVSA 507
ERYMKQAIVDK +V S+ALVS+
Sbjct: 69 ERYMKQAIVDKVSSVSSSALVSS 91
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
WINEAQEA +SD++MV
Sbjct: 105 WINEAQEAASSDNIMV 120
>AF207598-1|AAF19433.1| 871|Homo sapiens coat protein gamma2-COP
protein.
Length = 871
Score = 120 bits (288), Expect = 5e-27
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +1
Query: 259 DVXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 438
D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAI
Sbjct: 81 DQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 140
Query: 439 ERYMKQAIVDKNPAVGSAALVSA 507
ERYMKQAIVDK +V S+ALVS+
Sbjct: 141 ERYMKQAIVDKVSSVSSSALVSS 163
Score = 95.5 bits (227), Expect = 1e-19
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Frame = +2
Query: 47 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGXXLTTQE 214
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQG T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 215 ATDIFFATTKLFQ 253
AT+ FFA T+LFQ
Sbjct: 66 ATEAFFAMTRLFQ 78
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
WINEAQEA +SD++MV
Sbjct: 177 WINEAQEAASSDNIMV 192
>AF157833-1|AAF14271.1| 871|Homo sapiens nonclathrin coat protein
gamma2-COP protein.
Length = 871
Score = 120 bits (288), Expect = 5e-27
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +1
Query: 259 DVXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 438
D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAI
Sbjct: 81 DQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 140
Query: 439 ERYMKQAIVDKNPAVGSAALVSA 507
ERYMKQAIVDK +V S+ALVS+
Sbjct: 141 ERYMKQAIVDKVSSVSSSALVSS 163
Score = 95.5 bits (227), Expect = 1e-19
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Frame = +2
Query: 47 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGXXLTTQE 214
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQG T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 215 ATDIFFATTKLFQ 253
AT+ FFA T+LFQ
Sbjct: 66 ATEAFFAMTRLFQ 78
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
WINEAQEA +SD++MV
Sbjct: 177 WINEAQEAASSDNIMV 192
>AB047847-1|BAB17658.1| 871|Homo sapiens gamma2-COP protein.
Length = 871
Score = 120 bits (288), Expect = 5e-27
Identities = 60/83 (72%), Positives = 70/83 (84%)
Frame = +1
Query: 259 DVXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSITDSTMLQAI 438
D LRR+ YL IKE++ +++DVIIVTSSLTKDMTGK+D YR AIRALC ITD TMLQAI
Sbjct: 81 DQTLRRMCYLTIKEMATISEDVIIVTSSLTKDMTGKEDVYRGPAIRALCRITDGTMLQAI 140
Query: 439 ERYMKQAIVDKNPAVGSAALVSA 507
ERYMKQAIVDK +V S+ALVS+
Sbjct: 141 ERYMKQAIVDKVSSVSSSALVSS 163
Score = 95.5 bits (227), Expect = 1e-19
Identities = 45/73 (61%), Positives = 57/73 (78%), Gaps = 4/73 (5%)
Frame = +2
Query: 47 DGKEEDS----NVFQNLDKTTLLQEARYFNSTPVHPRKCIHILTKILYLLNQGXXLTTQE 214
D K+E+S N FQ+L+K+ +LQEAR FN TP++PR+C+HILTKILYLLNQG T E
Sbjct: 6 DKKDEESGSGSNPFQHLEKSAVLQEARIFNETPINPRRCLHILTKILYLLNQGEHFGTTE 65
Query: 215 ATDIFFATTKLFQ 253
AT+ FFA T+LFQ
Sbjct: 66 ATEAFFAMTRLFQ 78
Score = 31.1 bits (67), Expect = 3.1
Identities = 12/16 (75%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
WINEAQEA +SD++MV
Sbjct: 177 WINEAQEAASSDNIMV 192
>U37673-1|AAC50219.1| 1081|Homo sapiens beta-NAP protein.
Length = 1081
Score = 34.3 bits (75), Expect = 0.33
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 241 ETVSVKDVXLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIRALCSITD 417
+ V+ K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R L SI
Sbjct: 80 KNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRV 139
Query: 418 STMLQAIERYMKQAIVDKNPAVGSAA 495
++ + +K+A D +P V A
Sbjct: 140 PIIVPIMMLAIKEAASDMSPYVRKTA 165
>BC093739-1|AAH93739.1| 1082|Homo sapiens adaptor-related protein
complex 3, beta 2 subunit protein.
Length = 1082
Score = 34.3 bits (75), Expect = 0.33
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 241 ETVSVKDVXLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIRALCSITD 417
+ V+ K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R L SI
Sbjct: 80 KNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRV 139
Query: 418 STMLQAIERYMKQAIVDKNPAVGSAA 495
++ + +K+A D +P V A
Sbjct: 140 PIIVPIMMLAIKEAASDMSPYVRKTA 165
>AF022152-1|AAB71894.1| 1082|Homo sapiens AP-3 complex beta3B
subunit protein.
Length = 1082
Score = 34.3 bits (75), Expect = 0.33
Identities = 20/86 (23%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Frame = +1
Query: 241 ETVSVKDVXLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIRALCSITD 417
+ V+ K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R L SI
Sbjct: 80 KNVACKNIEVKKLVYVYLVRYAEEQQDLALLSISTFQRGLKDPNQLIRASALRVLSSIRV 139
Query: 418 STMLQAIERYMKQAIVDKNPAVGSAA 495
++ + +K+A D +P V A
Sbjct: 140 PIIVPIMMLAIKEAASDMSPYVRKTA 165
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 33.1 bits (72), Expect = 0.77
Identities = 19/82 (23%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 241 ETVSVKDVXLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIRALCSITD 417
+ V+ K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R L SI
Sbjct: 85 KNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRV 144
Query: 418 STMLQAIERYMKQAIVDKNPAV 483
++ + +K+A D +P V
Sbjct: 145 PIIVPIMMLAIKEASADLSPYV 166
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 33.1 bits (72), Expect = 0.77
Identities = 19/82 (23%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 241 ETVSVKDVXLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIRALCSITD 417
+ V+ K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R L SI
Sbjct: 85 KNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRV 144
Query: 418 STMLQAIERYMKQAIVDKNPAV 483
++ + +K+A D +P V
Sbjct: 145 PIIVPIMMLAIKEASADLSPYV 166
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 33.1 bits (72), Expect = 0.77
Identities = 19/82 (23%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 241 ETVSVKDVXLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIRALCSITD 417
+ V+ K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R L SI
Sbjct: 85 KNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRV 144
Query: 418 STMLQAIERYMKQAIVDKNPAV 483
++ + +K+A D +P V
Sbjct: 145 PIIVPIMMLAIKEASADLSPYV 166
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 33.1 bits (72), Expect = 0.77
Identities = 19/82 (23%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +1
Query: 241 ETVSVKDVXLRRLVYLCIKELSPMAQDVIIVT-SSLTKDMTGKDDEYRPAAIRALCSITD 417
+ V+ K++ +++LVY+ + + QD+ +++ S+ + + + R +A+R L SI
Sbjct: 85 KNVASKNIEIKKLVYVYLVRYAEEQQDLALLSISTFQRALKDPNQLIRASALRVLSSIRV 144
Query: 418 STMLQAIERYMKQAIVDKNPAV 483
++ + +K+A D +P V
Sbjct: 145 PIIVPIMMLAIKEASADLSPYV 166
>U72395-1|AAB68948.1| 890|Homo sapiens MIP protein.
Length = 890
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +1
Query: 262 VXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 411
+ + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 773 ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U72069-1|AAB58254.1| 890|Homo sapiens karyopherin beta2 protein.
Length = 890
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +1
Query: 262 VXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 411
+ + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 773 ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>U70322-1|AAC50723.1| 890|Homo sapiens transportin protein.
Length = 890
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +1
Query: 262 VXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 411
+ + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 773 ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC040340-1|AAH40340.1| 890|Homo sapiens transportin 1 protein.
Length = 890
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/50 (28%), Positives = 31/50 (62%)
Frame = +1
Query: 262 VXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALCSI 411
+ + RL Y+C +E++PM Q I + +++ +D+E + +A R +C++
Sbjct: 773 ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGICTM 820
>BC020498-1|AAH20498.2| 699|Homo sapiens COPG protein protein.
Length = 699
Score = 30.7 bits (66), Expect = 4.1
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = +2
Query: 545 WINEAQEAMTSDHVMV 592
W+NEAQEA +SD++MV
Sbjct: 2 WVNEAQEAASSDNIMV 17
>BC072420-1|AAH72420.1| 887|Homo sapiens transportin 2 (importin 3,
karyopherin beta 2b) protein.
Length = 887
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +1
Query: 262 VXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 405
+ + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 770 ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AF007748-1|AAB71349.1| 887|Homo sapiens karyopherin beta2b homolog
protein.
Length = 887
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +1
Query: 262 VXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 405
+ + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 770 ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 815
>AB210011-1|BAE06093.1| 1051|Homo sapiens TNPO2 variant protein
protein.
Length = 1051
Score = 29.9 bits (64), Expect = 7.2
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +1
Query: 262 VXLRRLVYLCIKELSPMAQDVIIVTSSLTKDMTGKDDEYRPAAIRALC 405
+ + RL Y+C +E++PM Q I + +++ +D+E + +A R +C
Sbjct: 934 ITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNI--RDNEEKDSAFRGIC 979
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,223,347
Number of Sequences: 237096
Number of extensions: 1655331
Number of successful extensions: 3090
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 2968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3090
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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