Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1424
         (776 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023877-1|ABA81811.1|  864|Drosophila melanogaster SD12752p pro...    55   1e-07
AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA ...    55   1e-07
AY071205-1|AAL48827.1|  184|Drosophila melanogaster RE24565p pro...    29   7.1  
AE013599-1925|AAF58228.3|  437|Drosophila melanogaster CG12863-P...    29   7.1  
AE013599-3978|AAM70798.1| 1618|Drosophila melanogaster CG9071-PA...    29   9.4  
AE013599-3977|AAF47291.4| 2327|Drosophila melanogaster CG9071-PB...    29   9.4  

>BT023877-1|ABA81811.1|  864|Drosophila melanogaster SD12752p
           protein.
          Length = 864

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
 Frame = +3

Query: 324 EGDVSLIQDEDLLRRMWQQTEDFSRKKEIRAHMYXXXXXXXXNLY------SPEPSGDG 482
           E D+  IQ+E+LLR+MWQQ+ED  RK++IR+H+Y        NLY        EP+G+G
Sbjct: 4   ECDLGDIQNEELLRKMWQQSEDSERKRQIRSHLYKLRESRLCNLYRHETDPMSEPNGNG 62



 Score = 32.3 bits (70), Expect = 0.77
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 3/86 (3%)
 Frame = +2

Query: 509 GWNVESDDRITDDGHTHVKSVNANIEGRYDVE-GGKGQFVAVDRHRQAVTEYQDENSSLE 685
           GW+V++   ++ DG  +     A  +G   +  GG  +F   +  R + +   D+ + ++
Sbjct: 123 GWDVQTSSEVSPDGRAYRTETLAKTDGVEKLNGGGLAEFKGRNEQRSSASHQGDDKNFVK 182

Query: 686 TERELFNTAAHEXVV--RKTDDRTQI 757
              +   T   E VV   +T  RT++
Sbjct: 183 QASDSSKTQLQETVVFGDETSGRTEM 208


>AE014298-905|AAF46171.2| 3166|Drosophila melanogaster CG3950-PA
           protein.
          Length = 3166

 Score = 54.8 bits (126), Expect = 1e-07
 Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 6/59 (10%)
 Frame = +3

Query: 324 EGDVSLIQDEDLLRRMWQQTEDFSRKKEIRAHMYXXXXXXXXNLY------SPEPSGDG 482
           E D+  IQ+E+LLR+MWQQ+ED  RK++IR+H+Y        NLY        EP+G+G
Sbjct: 4   ECDLGDIQNEELLRKMWQQSEDSERKRQIRSHLYKLRESRLCNLYRHETDPMSEPNGNG 62


>AY071205-1|AAL48827.1|  184|Drosophila melanogaster RE24565p
           protein.
          Length = 184

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +1

Query: 319 CLKETCL*FKTKIFCGACGNRPKISPVRKKSAPTCTASGKNVYGTCT 459
           C K  C   K  + C  CG  P ++    K   +C A  K  Y  C+
Sbjct: 55  CQKCDCYTAKENLHCNRCGKCPSVNGQTYKHCESCDACVKPNYVHCS 101


>AE013599-1925|AAF58228.3|  437|Drosophila melanogaster CG12863-PA
           protein.
          Length = 437

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 14/47 (29%), Positives = 19/47 (40%)
 Frame = +1

Query: 319 CLKETCL*FKTKIFCGACGNRPKISPVRKKSAPTCTASGKNVYGTCT 459
           C K  C   K  + C  CG  P ++    K   +C A  K  Y  C+
Sbjct: 308 CQKCDCYTAKENLHCNRCGKCPSVNGQTYKHCESCDACVKPNYVHCS 354


>AE013599-3978|AAM70798.1| 1618|Drosophila melanogaster CG9071-PA,
            isoform A protein.
          Length = 1618

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -2

Query: 694  SFRFKTGVLVLVFSDGLPVSINGYELALPAFHVVP---AFDVRVNGLDVGMTVVGDSIIR 524
            S RF+  + VL+F + L + I  Y+     F ++    AF   V GL+  + +VG     
Sbjct: 1216 SRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLRYHY 1275

Query: 523  FHVP 512
            F VP
Sbjct: 1276 FTVP 1279


>AE013599-3977|AAF47291.4| 2327|Drosophila melanogaster CG9071-PB,
            isoform B protein.
          Length = 2327

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
 Frame = -2

Query: 694  SFRFKTGVLVLVFSDGLPVSINGYELALPAFHVVP---AFDVRVNGLDVGMTVVGDSIIR 524
            S RF+  + VL+F + L + I  Y+     F ++    AF   V GL+  + +VG     
Sbjct: 1925 SRRFEIAIFVLIFLNMLTMGIEHYDQPHAVFFILEVSNAFFTTVFGLEAIVKIVGLRYHY 1984

Query: 523  FHVP 512
            F VP
Sbjct: 1985 FTVP 1988


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,900,798
Number of Sequences: 53049
Number of extensions: 673614
Number of successful extensions: 2094
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2093
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3602427675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)