Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1424
         (776 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024794-1|AAK68497.1|  994|Caenorhabditis elegans Hypothetical ...    31   0.70 
U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical pr...    31   1.2  
AC024880-2|AAF60914.4|  665|Caenorhabditis elegans Hypothetical ...    31   1.2  
Z83216-5|CAB62782.1|  221|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical pr...    30   1.6  
X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.      30   1.6  
Z81491-10|CAB04023.3|  282|Caenorhabditis elegans Hypothetical p...    28   8.6  
U97552-6|AAX55683.1|  216|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U97552-4|AAX55684.1|  666|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U97552-3|AAQ01521.1|  663|Caenorhabditis elegans Hypothetical pr...    28   8.6  
U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical pr...    28   8.6  
AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode ast...    28   8.6  

>AC024794-1|AAK68497.1|  994|Caenorhabditis elegans Hypothetical
           protein Y48G1BM.5 protein.
          Length = 994

 Score = 31.5 bits (68), Expect = 0.70
 Identities = 18/68 (26%), Positives = 27/68 (39%)
 Frame = +3

Query: 474 GDGKDLKELSNADGTWNLMIESPTTVIPTSSPLTRTSKAGTTWKAGRASS*PLIDTGKPS 653
           G   D ++L      W +     TT+   +S  TRTS+ G      R+ S  +  T   +
Sbjct: 569 GARSDQQDLPRDGSLWRIQCSHATTIRRATSTTTRTSRTGVPTTTSRSCSTTIWTTATTT 628

Query: 654 LNTKTRTP 677
             T   TP
Sbjct: 629 PATAATTP 636


>U50197-2|AAA91255.2|  624|Caenorhabditis elegans Hypothetical
           protein F25E2.2 protein.
          Length = 624

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
 Frame = +3

Query: 498 LSNADGTWN-LMIESPTTVIPTSSPLTRTSKAGTTWKAGRASS*PLIDTGKPSLNTKTRT 674
           +S  DG  N +  E PTT +PT++  T T+   TT      +  P   T KP+  T T  
Sbjct: 399 VSGKDGKGNSVKREVPTTPLPTTTTTTTTTPKPTTTTTTTTTPAP-TTTQKPTTTTTTPA 457

Query: 675 P 677
           P
Sbjct: 458 P 458


>AC024880-2|AAF60914.4|  665|Caenorhabditis elegans Hypothetical
           protein Y97E10AR.2a protein.
          Length = 665

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 516 TWNLMIESPTTVIPTSSPLTRTSKAGTTWKAGRASS*PLIDTGKPSLNTKTRTP 677
           T+    E PTT+  T++  T T+   TT +    ++ P+  T   +  T T TP
Sbjct: 146 TFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTSTSTTTTETP 199


>Z83216-5|CAB62782.1|  221|Caenorhabditis elegans Hypothetical
           protein C08F11.7 protein.
          Length = 221

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 16/67 (23%), Positives = 33/67 (49%)
 Frame = +2

Query: 476 RWERPEGAI*RGWNVESDDRITDDGHTHVKSVNANIEGRYDVEGGKGQFVAVDRHRQAVT 655
           RWE P+G + + W  + +  +  +G T      ++ EG  D +  +  F+   R ++  T
Sbjct: 157 RWELPDGTMNKRWWGKGEQPVIIEGLTIRAHSTSSSEGPTDKKNQEADFIPTKRRKR--T 214

Query: 656 EYQDENS 676
           + ++ NS
Sbjct: 215 DGENNNS 221


>Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical
           protein C29E6.1a protein.
          Length = 812

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 540 PTTVIPTSSPLTRTSKAGTTWKAGRASS*PLIDTGKPSLNTKTRT 674
           PTT   T++  T T K  TT  A  +SS   + T KP+  T T T
Sbjct: 507 PTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTT 551


>Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical
           protein C29E6.1b protein.
          Length = 653

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 540 PTTVIPTSSPLTRTSKAGTTWKAGRASS*PLIDTGKPSLNTKTRT 674
           PTT   T++  T T K  TT  A  +SS   + T KP+  T T T
Sbjct: 348 PTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTT 392


>X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.
          Length = 693

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = +3

Query: 540 PTTVIPTSSPLTRTSKAGTTWKAGRASS*PLIDTGKPSLNTKTRT 674
           PTT   T++  T T K  TT  A  +SS   + T KP+  T T T
Sbjct: 388 PTTPSKTTATTTTTPKPTTTETATTSSSTTTVTTQKPTTVTSTTT 432


>Z81491-10|CAB04023.3|  282|Caenorhabditis elegans Hypothetical
           protein D1086.6 protein.
          Length = 282

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 17/76 (22%), Positives = 28/76 (36%)
 Frame = +3

Query: 372 WQQTEDFSRKKEIRAHMYXXXXXXXXNLYSPEPSGDGKDLKELSNADGTWNLMIESPTTV 551
           W + +D  R+       Y        + Y+P P+     + + S +  + +    S TT 
Sbjct: 99  WNKCDDVKRQCAAAGGNYYAGANFQCSKYTPAPTVTSTTVVDTSESSTSQSTTTPSTTTT 158

Query: 552 IPTSSPLTRTSKAGTT 599
           I  SS  T      TT
Sbjct: 159 IIVSSTTTTNPTTSTT 174


>U97552-6|AAX55683.1|  216|Caenorhabditis elegans Hypothetical
           protein W05H7.4c protein.
          Length = 216

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 450 NLYSPEPSGDGKDLKELSNADGTWNLMIESPTTVIPTSSPLTRTSKAGTT 599
           ++Y+P  + DG  L     A G+ N  I+SP   +PT  PLT  S + TT
Sbjct: 3   DVYTPTKTMDGAFLP----AVGSPNTSIDSPAVYVPT--PLTAPSTSKTT 46


>U97552-4|AAX55684.1|  666|Caenorhabditis elegans Hypothetical
           protein W05H7.4e protein.
          Length = 666

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 450 NLYSPEPSGDGKDLKELSNADGTWNLMIESPTTVIPTSSPLTRTSKAGTT 599
           ++Y+P  + DG  L     A G+ N  I+SP   +PT  PLT  S + TT
Sbjct: 3   DVYTPTKTMDGAFLP----AVGSPNTSIDSPAVYVPT--PLTAPSTSKTT 46


>U97552-3|AAQ01521.1|  663|Caenorhabditis elegans Hypothetical
           protein W05H7.4b protein.
          Length = 663

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 19/50 (38%), Positives = 27/50 (54%)
 Frame = +3

Query: 450 NLYSPEPSGDGKDLKELSNADGTWNLMIESPTTVIPTSSPLTRTSKAGTT 599
           ++Y+P  + DG  L     A G+ N  I+SP   +PT  PLT  S + TT
Sbjct: 3   DVYTPTKTMDGAFLP----AVGSPNTSIDSPAVYVPT--PLTAPSTSKTT 46


>U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical
           protein C05D9.3 protein.
          Length = 423

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 409 SAPTCTASGKNVYGTCTPQSPAEMGK 486
           S+P C+ASGK   G C    P   GK
Sbjct: 276 SSPVCSASGKCKCGQCQCNKPTVTGK 301


>AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode
           astacin protease protein32 protein.
          Length = 651

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 13/28 (46%), Positives = 15/28 (53%)
 Frame = +3

Query: 516 TWNLMIESPTTVIPTSSPLTRTSKAGTT 599
           TWN  I S T   PTS+  T TS   T+
Sbjct: 66  TWNSRINSTTAATPTSTVTTSTSAPTTS 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,995,931
Number of Sequences: 27780
Number of extensions: 333887
Number of successful extensions: 1104
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1104
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)