Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1423
(651 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 25 0.71
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 25 0.71
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 25 0.71
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 22 5.0
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 22 5.0
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 22 5.0
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 22 5.0
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 22 5.0
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 22 5.0
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 22 5.0
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 22 5.0
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 22 5.0
AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory recept... 21 6.7
AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle pr... 21 6.7
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 8.8
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 24.6 bits (51), Expect = 0.71
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 17 SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 130
SG HLQ RL+ Q+D + G+ ++ ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 24.6 bits (51), Expect = 0.71
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 17 SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 130
SG HLQ RL+ Q+D + G+ ++ ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 24.6 bits (51), Expect = 0.71
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 17 SGLHLQPNATRLDPPAPYHQND*EYGRRRDSSTGEDPD 130
SG HLQ RL+ Q+D + G+ ++ ED D
Sbjct: 164 SGQHLQELGLRLEDANSDEQDDGDDGQGSSTNNDEDDD 201
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 597 PTT*FVVMATASRADIPSGSAYTYWAGTDTARPKRGTRGEPP 472
P T +S A S ++ T AGT+ K G PP
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 597 PTT*FVVMATASRADIPSGSAYTYWAGTDTARPKRGTRGEPP 472
P T +S A S ++ T AGT+ K G PP
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 308 PDSRESLWXKL 340
PDS++SLW K+
Sbjct: 35 PDSQKSLWKKI 45
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 21.8 bits (44), Expect = 5.0
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = +2
Query: 308 PDSRESLWXKL 340
PDS++SLW K+
Sbjct: 35 PDSQKSLWKKI 45
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 597 PTT*FVVMATASRADIPSGSAYTYWAGTDTARPKRGTRGEPP 472
P T +S A S ++ T AGT+ K G PP
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 597 PTT*FVVMATASRADIPSGSAYTYWAGTDTARPKRGTRGEPP 472
P T +S A S ++ T AGT+ K G PP
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 597 PTT*FVVMATASRADIPSGSAYTYWAGTDTARPKRGTRGEPP 472
P T +S A S ++ T AGT+ K G PP
Sbjct: 113 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 154
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 597 PTT*FVVMATASRADIPSGSAYTYWAGTDTARPKRGTRGEPP 472
P T +S A S ++ T AGT+ K G PP
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.8 bits (44), Expect = 5.0
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = -1
Query: 597 PTT*FVVMATASRADIPSGSAYTYWAGTDTARPKRGTRGEPP 472
P T +S A S ++ T AGT+ K G PP
Sbjct: 157 PATSTASQNLSSPASSTSSTSSTEKAGTNNNNSKSGQSSNPP 198
>AM292341-1|CAL23153.2| 393|Tribolium castaneum gustatory receptor
candidate 20 protein.
Length = 393
Score = 21.4 bits (43), Expect = 6.7
Identities = 12/39 (30%), Positives = 18/39 (46%)
Frame = -2
Query: 428 LDFTSAFKAQDXRSLRCRVDGALTNYQILEV*XTGFHAN 312
+ F+S + RSL GALT + ++ G H N
Sbjct: 353 IKFSSFGMLKISRSLLTSFGGALTTFLVILFQYGGIHGN 391
>AJ518940-1|CAD57734.1| 361|Tribolium castaneum extradenticle
protein.
Length = 361
Score = 21.4 bits (43), Expect = 6.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 243 FGGLRPLRYSKNLSRPLVRAEVLIRVKACG 332
FG R +RY KN+ + A + KA G
Sbjct: 281 FGNKR-IRYKKNIGKAQEEANLYAAKKAAG 309
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.0 bits (42), Expect = 8.8
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 119 EDPDRKWCY*NTARGNARKIYRGEKG*DPTAQGNARRSTYRLR-GSQTVKI 268
++PD KW ++++ R YR D + R +R GS+ K+
Sbjct: 223 DEPDHKWKKNDSSKKKTRYYYRSV---DDVIEKGKRPGAFRTTLGSELSKV 270
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,142
Number of Sequences: 336
Number of extensions: 2830
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -