Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1423
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical pr...    56   3e-08
Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical pr...    47   1e-05
Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical pr...    43   2e-04
Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical pr...    42   4e-04
Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical pr...    38   0.006
U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol dehydro...    37   0.011
AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical ...    37   0.011
AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical ...    37   0.011
AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical ...    36   0.033
U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z92834-3|CAB07384.1|  328|Caenorhabditis elegans Hypothetical
           protein F39B2.3 protein.
          Length = 328

 Score = 55.6 bits (128), Expect = 3e-08
 Identities = 32/85 (37%), Positives = 46/85 (54%)
 Frame = +3

Query: 219 MRAVVLTGFGGLRPLRYSKNLSRPLVRAEVLIRVKACGLNFQDLIVRQGAIDSAPKTPXI 398
           MRA V+  FG    +   ++    L + +VL+R  A G+N  D  +R G     P  P +
Sbjct: 10  MRAAVVRRFGAPDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDTYIRAGQYGKLPNLPYV 69

Query: 399 LGFECAGEIEQVGENVTNFKVGDQV 473
            G + AG +E VGE+V N KVGD+V
Sbjct: 70  PGKDGAGFVELVGESVKNVKVGDRV 94


>Z70782-4|CAA94842.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.6 protein.
          Length = 347

 Score = 47.2 bits (107), Expect = 1e-05
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
 Frame = +3

Query: 249 GLRPLRYSKN-LSRPLVRAEVLIRVKACGLNFQDL-IVRQGAIDS-APKTPXILGFECAG 419
           G+  LR  +  +S+P  R +VL+++   G+   D+  +  GAI S   K P +LG E +G
Sbjct: 12  GINDLRLEQAPISKPGPR-QVLVKINTVGICGSDVHFLTHGAIGSFVVKEPMVLGHESSG 70

Query: 420 EIEQVGENVTNFKVGDQVVALP 485
            + ++G  V  FKVGD++   P
Sbjct: 71  VVSEIGSEVKGFKVGDRIAMEP 92


>Z81570-2|CAB04604.1|  349|Caenorhabditis elegans Hypothetical
           protein K12G11.3 protein.
          Length = 349

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 19/56 (33%), Positives = 34/56 (60%)
 Frame = +3

Query: 303 EVLIRVKACGLNFQDLIVRQGAIDSAPKTPXILGFECAGEIEQVGENVTNFKVGDQ 470
           E+L++++  G+   DL V  G +      P + G E AG + Q+G+NVT +++GD+
Sbjct: 35  EILVKIEYSGICHSDLHVWLGDLKDMSVCPLVGGHEGAGSVVQIGKNVTGWQLGDK 90


>Z82081-5|CAB04958.1|  344|Caenorhabditis elegans Hypothetical
           protein W09H1.5 protein.
          Length = 344

 Score = 41.9 bits (94), Expect = 4e-04
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
 Frame = +3

Query: 303 EVLIRVKACGLNFQDLIVRQGAIDSAPKTPXILGFECAGEIEQVGENVTNFKVGDQVVA- 479
           +VL++  A  +N  DL   QG     P  P + G E  G++  VG NV++ KVGD V+  
Sbjct: 47  QVLVQWIAAPINPADLNQIQGVYPVKPALPAVGGNEGFGKVISVGSNVSSIKVGDHVIPD 106

Query: 480 LPEYRAWAELCLYR 521
                 W EL L++
Sbjct: 107 RSGLGTWRELGLHQ 120


>Z70782-3|CAA94841.1|  347|Caenorhabditis elegans Hypothetical
           protein R04B5.5 protein.
          Length = 347

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
 Frame = +3

Query: 303 EVLIRVKACGLNFQDLIV-RQGAIDS-APKTPXILGFECAGEIEQVGENVTNFKVGDQVV 476
           +VL++V   G+   D+     GAI     K P I+G E +G + +VG  V + KVGD++ 
Sbjct: 30  QVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHETSGIVSEVGNEVKHLKVGDRIA 89

Query: 477 ALP 485
             P
Sbjct: 90  MEP 92


>U18781-1|AAB03374.1|  384|Caenorhabditis elegans alcohol
           dehydrogenase protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 390 PXILGFECAGEIEQVGENVTNFKVGDQVVAL 482
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-4|AAF39899.1|  384|Caenorhabditis elegans Hypothetical
           protein H24K24.3a protein.
          Length = 384

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 390 PXILGFECAGEIEQVGENVTNFKVGDQVVAL 482
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 65  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 95


>AC006663-3|AAL32231.1|  386|Caenorhabditis elegans Hypothetical
           protein H24K24.3b protein.
          Length = 386

 Score = 37.1 bits (82), Expect = 0.011
 Identities = 17/31 (54%), Positives = 20/31 (64%)
 Frame = +3

Query: 390 PXILGFECAGEIEQVGENVTNFKVGDQVVAL 482
           P +LG E +G +E VGE VT F  GD VV L
Sbjct: 67  PVVLGHEGSGIVESVGEGVTGFAPGDHVVPL 97


>AC025722-1|AAK68507.1|  554|Caenorhabditis elegans Hypothetical
           protein Y50D4C.2 protein.
          Length = 554

 Score = 35.5 bits (78), Expect = 0.033
 Identities = 16/31 (51%), Positives = 20/31 (64%)
 Frame = +3

Query: 390 PXILGFECAGEIEQVGENVTNFKVGDQVVAL 482
           P +LG E +G +E VG+ VT F  GD VV L
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPL 268


>U97011-2|AAB52325.2|  689|Caenorhabditis elegans Hypothetical
           protein F31F7.2 protein.
          Length = 689

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 11/41 (26%), Positives = 23/41 (56%)
 Frame = +3

Query: 387 TPXILGFECAGEIEQVGENVTNFKVGDQVVALPEYRAWAEL 509
           TP I  F+   EI+ + + ++  K+G   VA+ ++  W+ +
Sbjct: 98  TPQITSFQHRAEIDFLRQVMSTMKMGSSKVAMAQFTPWSRI 138


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/34 (32%), Positives = 21/34 (61%)
 Frame = +2

Query: 95  RRRDSSTGEDPDRKWCY*NTARGNARKIYRGEKG 196
           +RRD+  G++   +W + N A+   R +Y+G +G
Sbjct: 241 QRRDTGEGDELVARWYFDNQAKECRRFLYKGIRG 274


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,316,781
Number of Sequences: 27780
Number of extensions: 274287
Number of successful extensions: 773
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)