Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1423
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.1  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   5.9  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    21   7.8  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    21   7.8  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   7.8  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   7.8  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   7.8  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    21   7.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   7.8  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 502 PSCVCTGPVRVRAARRNVCPGCCCHH 579
           P  VC+ P  V  A++ V    CC H
Sbjct: 583 PESVCSLPCEVGQAKKYVAGEQCCWH 608


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/37 (24%), Positives = 18/37 (48%)
 Frame = +1

Query: 514 CTGPVRVRAARRNVCPGCCCHHHELRGGLSAALXDGL 624
           C+G   +R    + C GC    H+ + G++ +   G+
Sbjct: 22  CSGYPSIRQGTTSYCLGCGDSCHKCKYGIAMSSACGI 58


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 564 MLLPSPRTTWW 596
           ML PSP+T W+
Sbjct: 201 MLEPSPKTPWY 211


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 228 RRAFPWAVGSHPFSPR 181
           RR FP   G  PF+P+
Sbjct: 31  RRPFPTFPGQGPFNPK 46


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/45 (22%), Positives = 20/45 (44%)
 Frame = -3

Query: 415 AHSKPKXKGVFGAESMAP*RTIKSWKFXPQAFTRIRTSALTNGRL 281
           AH K   + + G  S  P + + +W   P+      T+ + +G +
Sbjct: 94  AHMKKVREQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHV 138


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/45 (22%), Positives = 20/45 (44%)
 Frame = -3

Query: 415 AHSKPKXKGVFGAESMAP*RTIKSWKFXPQAFTRIRTSALTNGRL 281
           AH K   + + G  S  P + + +W   P+      T+ + +G +
Sbjct: 94  AHMKKVREQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHV 138


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 10/45 (22%), Positives = 20/45 (44%)
 Frame = -3

Query: 415 AHSKPKXKGVFGAESMAP*RTIKSWKFXPQAFTRIRTSALTNGRL 281
           AH K   + + G  S  P + + +W   P+      T+ + +G +
Sbjct: 94  AHMKKVREQMAGILSRIPEQGVVNWNKIPEGANTTSTTKIIDGHV 138


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -1

Query: 228 RRAFPWAVGSHPFSPR 181
           RR FP   G  PF+P+
Sbjct: 17  RRPFPTFPGQGPFNPK 32


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 442 MSPILRWATKWWLSPSTALGPSCVC 516
           MS I  +  K  L+P   + P+C C
Sbjct: 293 MSMIGAFGNKALLTPGVTMIPACTC 317


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,899
Number of Sequences: 438
Number of extensions: 2959
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)