Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--1418
         (664 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.8  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.0  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   9.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.0  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = +2

Query: 317 TSTLRSSTMLSQELEPTNKPSSRSCARFPTMVSVP 421
           ++T+ +S+     + PT   +S SC   P+M   P
Sbjct: 10  STTMATSSNAMSPMTPTYSMNSMSCVSMPSMNCSP 44


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 427  AFYEQLYGKSLESDLKGDTSGH 492
            A+Y Q  GK L SD+  D   H
Sbjct: 1833 AWYRQGVGKYLPSDIDPDLCTH 1854


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = +1

Query: 562 LKPMLKHWPPLVKVKWGTDESIFNSILIT 648
           LK   KHW  + + KW   E      L T
Sbjct: 188 LKGNAKHWTGIFQKKWRGYEDFRRDFLRT 216


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/29 (24%), Positives = 16/29 (55%)
 Frame = -3

Query: 395 VHRISMMAYSSVPIPETASWSSLA*KWGR 309
           + ++++  Y+SV   E   W++    WG+
Sbjct: 172 IPQLTIFTYTSVGEDEYDCWATFQEPWGK 200


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 623 DSSVPHLTFTSGGQCFSIG 567
           DS   H T  +GG C  +G
Sbjct: 145 DSHCDHTTCKNGGTCQDLG 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,795
Number of Sequences: 336
Number of extensions: 2964
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17177325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)