Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--1418
(664 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0008 + 13651997-13652072,13652440-13652541,13653138-136531... 50 2e-06
08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107 50 2e-06
06_01_0830 + 6261629-6261704,6261829-6261974,6262086-6262310,626... 47 1e-05
01_05_0009 - 17101633-17101836,17101948-17102040,17102122-171023... 46 3e-05
02_05_0782 - 31716860-31717150,31717400-31717612,31718497-317186... 44 8e-05
05_04_0139 + 18355597-18355696,18356665-18356778,18357118-183572... 43 2e-04
09_03_0079 + 12142390-12142459,12142792-12143006,12143050-121432... 35 0.066
12_01_0461 + 3618414-3618782,3619664-3619794,3620177-3620294,362... 30 1.4
04_03_0920 + 20826876-20829293 30 1.4
09_04_0360 - 16944990-16945202,16945288-16945377,16945525-169457... 30 1.9
04_03_0923 + 20843477-20845044,20846081-20846996 28 5.8
09_04_0202 - 15544498-15545037,15546043-15546449,15546874-155469... 28 7.6
03_05_0721 + 27134277-27134666,27135401-27135466,27137036-271371... 28 7.6
02_05_1224 + 35045268-35045270,35045735-35045863,35046037-350461... 28 7.6
>09_04_0008 +
13651997-13652072,13652440-13652541,13653138-13653142,
13653970-13654188,13654686-13654901,13654989-13655078,
13656307-13656507
Length = 302
Score = 50.0 bits (114), Expect = 2e-06
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Frame = +1
Query: 256 KSELTGNLENVIVALMTPLPH---FYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTIS 426
KSE +GN E ++ ++ + ++AK L ++ G+GTD+ +I ++ T + ++ I
Sbjct: 209 KSETSGNFELALLTILRCAENPAKYFAKVLRKSMKGMGTDDSTLIRVVVTRTEIDMQYIK 268
Query: 427 AFYEQLYGKSLESDLKGDTSGHFK 498
A Y + Y KSL + +TSG+++
Sbjct: 269 AEYYKKYKKSLAEAIHSETSGNYR 292
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/59 (35%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Frame = +1
Query: 325 AKELHDA-VSGIGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 498
AK+L+ A +GTDE I I S + ++++ Y +Y +SLE +K +TSG+F+
Sbjct: 159 AKDLYKAGEKRLGTDEKTFIRIFTERSWAHMASVASAYHHMYDRSLEKVVKSETSGNFE 217
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/60 (31%), Positives = 31/60 (51%)
Frame = +1
Query: 325 AKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 504
A L +A+SG D A EI+C+ + ++ + Y +G LE D+ TSG ++L
Sbjct: 76 ATVLREALSGDTIDLRAATEIICSRTPSQLQIMKQTYHAKFGTYLEHDIGQRTSGDHQKL 135
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDL 244
LRK+MKG GTD+ +I V+ R + I + Y K L
Sbjct: 238 LRKSMKGMGTDDSTLIRVVVTRTEIDMQYIKAEYYKKYKKSL 279
>08_02_0726 + 20452492-20453238,20453676-20453765,20453904-20454107
Length = 346
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/85 (31%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Frame = +1
Query: 256 KSELTGN----LENVIVALMTPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTI 423
KSE +GN L ++ +P +F AK LH+A+ G+GT++ +I ++ T + ++ I
Sbjct: 252 KSETSGNFGFGLLTILRCAESPAKYF-AKVLHEAMKGLGTNDTTLIRVVTTRAEVDMQYI 310
Query: 424 SAFYEQLYGKSLESDLKGDTSGHFK 498
A Y + Y +SL + +TSG+++
Sbjct: 311 KAEYHRSYKRSLADAVHSETSGNYR 335
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLI 247
L +A KGFG D A+ +L R QR I + Y +DL+
Sbjct: 20 LHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLL 62
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = +1
Query: 313 PHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGH 492
P A +LH A G G D A+ IL I Y +Y + L L + SGH
Sbjct: 13 PRRDAIDLHRAFKGFGCDATAVTAILAHRDASQRALIRRHYAAVYHQDLLHRLAAELSGH 72
Query: 493 FKR 501
KR
Sbjct: 73 HKR 75
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 4/86 (4%)
Frame = +1
Query: 259 SELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYE 438
+EL+G+ + ++ + A LH A++G TD A E++C+ + + + Y
Sbjct: 67 AELSGHHKRAVLLWVLDPASRDAAVLHQALNGDVTDMRAATEVVCSRTPSQLLVVRQAYL 126
Query: 439 QLY----GKSLESDLKGDTSGHFKRL 504
+ G LE D+ SG +RL
Sbjct: 127 ARFGGGGGGGLEHDVAVRASGDHQRL 152
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +1
Query: 325 AKELHDAVSG-IGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKSLE 462
A+EL+ A +GTDE I + S + ++A Y +Y +SLE
Sbjct: 177 ARELYRAGERRLGTDERTFIRVFSERSAAHMAAVAAAYHHMYDRSLE 223
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDL 244
L +AMKG GT++ +I V+ R V I + +Y + L
Sbjct: 281 LHEAMKGLGTNDTTLIRVVTTRAEVDMQYIKAEYHRSYKRSL 322
>06_01_0830 +
6261629-6261704,6261829-6261974,6262086-6262310,
6262910-6263122,6264007-6264300
Length = 317
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/83 (28%), Positives = 44/83 (53%)
Frame = +1
Query: 256 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFY 435
K E L +I P ++ K + A++G+GTDE ++ I+ T + ++ I+ Y
Sbjct: 227 KDEFLSTLRAIIRCFCCP-DRYFEKVIRLAIAGMGTDENSLTRIITTRAEVDLKLITEAY 285
Query: 436 EQLYGKSLESDLKGDTSGHFKRL 504
++ LE + GDTSG ++R+
Sbjct: 286 QKRNSVPLERAVAGDTSGDYERM 308
Score = 41.1 bits (92), Expect = 8e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLI 247
LRKA +G+GT+E II +L R QR I + YG++L+
Sbjct: 20 LRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELL 62
Score = 33.5 bits (73), Expect = 0.15
Identities = 21/64 (32%), Positives = 26/64 (40%)
Frame = +1
Query: 304 TPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDT 483
T L H AK LH+ + + II IL T S + Y YG + DLK D
Sbjct: 167 TKLAHSEAKILHEKIQHKAYGDDEIIRILTTRSKAQLIATFNRYNDEYGHPINKDLKADP 226
Query: 484 SGHF 495
F
Sbjct: 227 KDEF 230
Score = 33.1 bits (72), Expect = 0.20
Identities = 20/57 (35%), Positives = 26/57 (45%)
Frame = +1
Query: 331 ELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKR 501
+L A G GT+E II IL R I Y YG+ L + + SG F+R
Sbjct: 19 QLRKAFQGWGTNEALIISILAHRDAAQRRAIRRAYADTYGEELLRSITDEISGDFER 75
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/49 (24%), Positives = 24/49 (48%)
Frame = +1
Query: 358 GTDE*AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 504
G+ ++EI C + + Y + + +SLE D+ +G F++L
Sbjct: 102 GSGSRVLVEIACARGPAQLFAVRQAYHERFKRSLEEDVAAHATGDFRKL 150
>01_05_0009 -
17101633-17101836,17101948-17102040,17102122-17102334,
17102514-17102651,17102764-17102909,17106264-17106339
Length = 289
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/43 (48%), Positives = 30/43 (69%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLI 247
L KA +G+GTDE+A+I VL R QR +I T++ NY ++LI
Sbjct: 20 LLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNENLI 62
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +1
Query: 277 LENVIVALMTPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKS 456
+ ++V +TP P A L A G GTDE A+I +L + I YE+ Y ++
Sbjct: 1 MATIVVPPVTPSPAEDADALLKAFQGWGTDEQAVIGVLAHRDATQRKQIRLTYEENYNEN 60
Query: 457 LESDLKGDTSGHFKR 501
L L+ + SG +R
Sbjct: 61 LIQRLQSELSGDLER 75
>02_05_0782 -
31716860-31717150,31717400-31717612,31718497-31718642,
31718742-31718817
Length = 241
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/43 (46%), Positives = 27/43 (62%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLI 247
LRKA KG+GT+EK II +L R QR I + YG++L+
Sbjct: 20 LRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELL 62
Score = 37.5 bits (83), Expect = 0.009
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +1
Query: 256 KSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFY 435
K E G L +I P ++ K + A+ G+GTDE ++ I+ T + ++ I Y
Sbjct: 152 KDEFLGTLRAIIRCFTCP-DRYFEKVIRLALGGMGTDENSLTRIITTRAEVDLKLIKEAY 210
Query: 436 EQLYGKSLESDLKGDTSGHFK 498
++ LE + DT+ ++
Sbjct: 211 QKRNSVPLERAVAKDTTRDYE 231
Score = 31.5 bits (68), Expect = 0.62
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +1
Query: 328 KELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFKRL 504
++L A G GT+E II IL R I Y + YG+ L L + G F+ L
Sbjct: 18 EQLRKAFKGWGTNEKLIISILAHRDAAQRRAIRRAYAEAYGEELLRALNDEIHGKFELL 76
>05_04_0139 +
18355597-18355696,18356665-18356778,18357118-18357263,
18357365-18357910,18358397-18358600
Length = 369
Score = 43.2 bits (97), Expect = 2e-04
Identities = 19/44 (43%), Positives = 31/44 (70%)
Frame = +2
Query: 116 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLI 247
++RKA++G+GTDE A+I++L R QR EIA ++ Y + L+
Sbjct: 65 SIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDETLL 108
Score = 41.9 bits (94), Expect = 4e-04
Identities = 20/78 (25%), Positives = 43/78 (55%)
Frame = +1
Query: 262 ELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQ 441
+L L+ + L +P HF A+ + ++ G+GTDE + + + + + + Y+
Sbjct: 281 QLAAVLKAALWCLTSPEKHF-AEVIRTSILGLGTDEEMLTRGIVSRAEVDMEKVKEEYKV 339
Query: 442 LYGKSLESDLKGDTSGHF 495
Y ++ +D++GDTSG++
Sbjct: 340 RYNTTVTADVRGDTSGYY 357
Score = 40.7 bits (91), Expect = 0.001
Identities = 26/74 (35%), Positives = 38/74 (51%)
Frame = +1
Query: 277 LENVIVALMTPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKS 456
+ ++ V P P A+ + AV G GTDE A+IEIL + I+ YE LY ++
Sbjct: 47 MASISVPNPAPSPTEDAESIRKAVQGWGTDENALIEILGHRTAAQRAEIAVAYEGLYDET 106
Query: 457 LESDLKGDTSGHFK 498
L L + SG F+
Sbjct: 107 LLDRLHSELSGDFR 120
>09_03_0079 +
12142390-12142459,12142792-12143006,12143050-12143268,
12143345-12143932
Length = 363
Score = 34.7 bits (76), Expect = 0.066
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 259 SELTGNLENVIVALMTPLPHFYAKEL-HDAVSGIGTDE*AIIEILCTLSNYGIRTISAFY 435
S L+G++ + L P ++ DA+ G D ++E++CT + + I Y
Sbjct: 87 SILSGSIAIRVACLRASEPCVRDADIARDALFGRRIDGDVLVEVVCTRPSGEVALIRQAY 146
Query: 436 EQLYGKSLESDLKGDTSG 489
+ Y SLE D+ TSG
Sbjct: 147 QARYSASLERDVSSRTSG 164
>12_01_0461 +
3618414-3618782,3619664-3619794,3620177-3620294,
3620602-3620654,3620758-3620807,3620912-3621010,
3621511-3621620,3621773-3621900,3622071-3622161,
3622610-3622693,3622863-3623083,3623449-3623527,
3624134-3624283,3624326-3624470,3624604-3624983,
3625096-3625197
Length = 769
Score = 30.3 bits (65), Expect = 1.4
Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Frame = -2
Query: 510 TAQSLEVSRRVAF*VRFQALAVQLFVKCGYGTDTIVGKRAQDLDDGL--FVGSNS*DSI- 340
T + + RR+ VR L QL V G+ D ++GK + D+D L G N + +
Sbjct: 90 TEKEERIFRRLLDVVRHFGLGTQLRVAGGWVRDKLLGKDSTDIDIALDNMTGQNFCEKVN 149
Query: 339 --VELLSVE-VGQGSHQCDDD 286
ELL E G G QC+ D
Sbjct: 150 EYSELLGEEQKGIGVIQCNPD 170
>04_03_0920 + 20826876-20829293
Length = 805
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 310 LPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSG 489
LPH A+ + A SG + + CT +YG S ++++LY SD D +G
Sbjct: 366 LPH-NAENVQAATSGDECSQVCLSNCSCTAYSYGKDGCSIWHDELYNVKQLSDASSDRNG 424
>09_04_0360 -
16944990-16945202,16945288-16945377,16945525-16945746,
16945854-16946081,16946163-16946372
Length = 320
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 325 AKELHDAV-SGIGT-DE*AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDTSGHFK 498
A+ L+DA SG+G+ DE I+E+ S +R Y+ +YG LK + G F+
Sbjct: 172 ARRLYDAKNSGMGSVDEAVILEMFSKRSIPQLRLAFCSYKHIYGHDYTKALKKNGFGEFE 231
Query: 499 R 501
+
Sbjct: 232 Q 232
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +1
Query: 253 TKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAF 432
++++ TG + LPH A+ + A S + + CT +YG S +
Sbjct: 347 SRTDRTGLTDKFYPVQSIRLPHS-AENVKVATSADECSQACLSNCSCTAYSYGKSGCSVW 405
Query: 433 YEQLYGKSLESDLKGDTSG 489
+++LY SD D +G
Sbjct: 406 HDELYNVKQLSDSSSDGNG 424
>09_04_0202 -
15544498-15545037,15546043-15546449,15546874-15546977,
15547580-15547788,15548092-15549428,15551680-15551941
Length = 952
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/65 (26%), Positives = 26/65 (40%), Gaps = 2/65 (3%)
Frame = +1
Query: 271 GNLENV-IVALMTPLPHFYAKELHDAVSGIGTDE*AIIEILCTLSNYGIRTISAFYEQL- 444
GN V +++ P Y+ L V D + I C + YG R + YE
Sbjct: 116 GNRSQVPVISFTATSPSLYSASLPYFVRATLNDSAQVQSIACLIKTYGWREVVPIYEDTD 175
Query: 445 YGKSL 459
YG+ +
Sbjct: 176 YGRGI 180
>03_05_0721 +
27134277-27134666,27135401-27135466,27137036-27137191,
27137286-27137453,27137544-27137711
Length = 315
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 9/64 (14%)
Frame = -1
Query: 169 VDDSLLIGAEALHSLAKGLGIR-GRVER-----LRGVHRGGALVRV---VLLSAHVEILL 17
VDDSL A+A+H L + LG + GR ++ + +H A+ R+ + L H+ I+
Sbjct: 140 VDDSLAQCAKAVHVLCRALGGKTGRSKKGWDIGVNCIHPTAAMARLFSPIKLPVHMPIIE 199
Query: 16 FNSD 5
F+ D
Sbjct: 200 FHQD 203
>02_05_1224 +
35045268-35045270,35045735-35045863,35046037-35046180,
35046306-35046451,35046583-35046739,35046838-35046896,
35046978-35047137,35047716-35047865,35047969-35048105,
35048186-35048332,35048428-35048540,35048880-35048971,
35049637-35049738,35050108-35050145,35050255-35050381,
35050462-35050632,35050721-35050852,35050929-35051038,
35051118-35051178,35051386-35051427,35051756-35051933,
35052043-35052248,35052843-35052962,35053138-35053182,
35053310-35053408,35053846-35054058,35054254-35054393,
35054469-35054583,35054684-35054722,35054816-35054899,
35054969-35055139,35055891-35056100,35056193-35056378,
35056473-35056601,35056679-35056749,35056834-35056933,
35057016-35057072,35057778-35057834,35057940-35058020,
35058256-35058338,35058448-35058562
Length = 1572
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 119 LRKAMKGFGTDEKAIIDVLCRRGIVQRLE 205
L+ A + F DEKA+ D LC+R IV R E
Sbjct: 354 LKTAAELFMCDEKALEDSLCKRIIVTRDE 382
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,846,314
Number of Sequences: 37544
Number of extensions: 352224
Number of successful extensions: 973
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1667659452
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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